Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             ---------->DOF2                          --------->YAB1                         <---------ATHB12                                       --------->TOE1(3)                    --------->ANAC58                             --------->REM1(1)      ----------->GT1    ------>ZmHOX2a(2)  --------->WOX13(1)                      ------>ZmHOX2a(1)--------->TOE2(3)  --------->ARR11(3)--------->ANAC46                        ------>NtERF2  ------>ZmHOX2a(1) -------TEIL        --------->ANAC58                 --------->AtMYB61    --------->TOE2(3) -------P       <---------HSFB2a(2)                 --------->MYB46(3) --------->ARR14(2)--------->At5g28300   ggttgatctagtttgattctgtaagcaatcaaagcatccatttgcctattcaaaaccactgcctccttcaccaattcctcaacgttagaccggtaaaatc  12984200                               ---------->DOF2                     ------>ZmHOX2a(2)                    <------ZmHOX2a(2)                    --------->CCA1(2)                   <---------ARR11(3)                   <---------ARR14(2)                   --------->ARR11(3)         ----------->HVH21       <----------DOF2  --------->ANAC55(2)    <----------DOF2--------->ARR14(2)    --------->ANAC58       --------->HSFB2a(2)    <---------ANAC46    <---------DAG2 --------->AGP1        --------->ANAC58       <---------HSFB2a(2)    <---------ANAC55(2)   ggtttactttatcaaactcgagatctagggttttaaagaacacaagctctgactctctccctacttctgaaactttcaagatggtcgtctcgtatttctc  12984300                                                                          ------->TEIL                                                                          --------->SPL7                                   <---------ANAC58                     <---------ZAT14                                   <---------ANAC46                     <---------SPL7                              --------->YAB1                           <----------DOF2                           --------->TOE2(3)                         --------->At4g35610            <                           --------->YAB1                          <---------RAP2.3(2)              <                    <---------ANAC55(2)                            <---------RAP2.6(2)              <                    <---------ANAC58                              <-------TEIL             <---------                    <---------ANAC46                             --------->ALFIN1         --------->At4g35610                 <---------MYB52(1)<---------ANAC58           --------->DAG2   <----------DOF2      <               <---------MYB46(3)--------->ARR11(3)           <---------------AtSPL3      <------NtERF2     <---------ICU4 <---------ANAC55(1)              --------->LBD16 <---------At4g35610  <---------At4g35610    <---------ATHB12<---------ANAC58                --------->LBD16<---------DEAR3(1)>>>>>>>GRF7    <  --------->WOX13(1)--------->ANAC55(2)          --------->PCF5<---------HSFB2a(1)<-----------HVH21<-   aaatccatcatccccagtcgttgcgtgaaccataatatcgtggttttcgaggtcccgagacgagaaggtgcggctgtaccgctttgtcaggccgctgaag  12984400    ------>NtERF2   ----------->HVH21   --------->DEAR3(1)  ------>NtERF2  --------->ORA47(2)  --------->ATERF1(1)  --------->RAP2.3(1)  <------NtERF2 <---------RAP2.3(1) --------->LBD16         --------->ANAC46 ---------DEAR3(1)<---------ANAC46            <----------DOF2 ---------RAP2.3(2)      --------->ANAC58    ------>ZmHOX2a(2)      <---------HSFB2a(2) ---------ANAC46  <---------ANAC58         <---------ARR11(3)       <---------HSFC1(1) -CDC5        <---------ANAC58       <----------DOF2                --------->HSFC1(1) ---------RRTF1(2)<---------ANAC58  <---------ANAC58                --------->HSFB2a(2) ---------RAP2.6(2)      --------->ANAC58  --------->ARR11(3)   <---------GLK1(1)   <----------ARF1 --------LBD16<---------ANAC58      <---------ANAC58         <---------YAB1         <----------ID1  -   ttgcggcgaccagatagcttgcgtttcaagacaccttggctttctgatcttttctgtgaagttttgatttctcgaagaatggttttgagacaagtgtaat  12984500                               --------->ANAC46                           <---------At4g35610                           --------->At4g35610                           ----------->RAV1(2)                   <---------HSFB2a(2)                   --------->HSFB2a(2)           <-----------GT1 ===================RAV                                                 ---          ---------->ID1 --------->YAB1    <----------DOF2      <-----------GT1                   --- -------->AtLEC2--------->GLK1(2) ----------->RAV1(1)      <----------DOF2                        <--   ccatgtaagcttgttgccattctggaatcatctgagcaacatactcttttccaaacttcatctttgtttcccttcttgaatttctctgtaaaatttcaag  12984600                                                                                 --------->HSFB2a(1)                                                                         <---------TGA1a                                                                         <---------O2             ---------->DOF2                                             <---------bZIP60(1)            <---------AHL20(2)                                           --------->bZIP60(1)           --------->AHL20(2)                                            --------->O2      ------------>CBF                                                   <---------ANAC46     <------ZmHOX2a(2)                                                   <---------ANAC58    <---------ARR11(3)                                                   <---------ANAC58    --------->ARR14(2)                                         <---------WOX13(1)--------->HSFC1(2) <    <---------ARR14(2)         ------->TEIL                   <------------CBF   <---------HSFB2a(1)-    --------->AGP1          <---------------AGL15            --------->ATHB12    <---------HSFC1(2) < ------>ARR14(2)           <---------TOE2(3)     <---------AHL20(2)      ============================ ------>GLK1(2)          <---------AHL20(2)     --------->AHL20(1)       --------->TGA1a            - -------ARR14(2)        <---------YAB1          <---------AHL20(1)       --------->ANAC55(2)  -------   aatccagatccaatttaaagcctatttttaatgtatatagaaacagcatatatatttgcaagttgattgaatttgacgtgagaaaattccaaagagttga  12984700                                 <---------ZAT18                                 --------->ZAT18                                 <---------RAP2.3(3)                              --------->ALFIN1                              <---------ANAC46                              <---------ANAC58                              <---------ANAC58                           --------->ALFIN1                          <-------MYC2                          ------->MYC3                          <-------MYC3                       <---------ANAC58                       <---------ANAC58                      <-------TEIL                   <------MYB46(1)                   <---------ANAC58                   <---------ANAC58                  --------->MYB46(2)                  --------->MYB52(2)                  <---------AtMYB61                 <---------MYB55(1)                <---------MYB52(1)   <------------CBF<---------ANAC46<---------PCF2 <---------AHL20(2)<------MYB83 --------->ALFIN1 ---------AHL20(1)<---------MYB46(3) -------->AHL20(1)--------->MYB111(1)               --------->AHL20(2) ---------AHL20(2)--------->MYB111(2)               <---------AHL20(2) ===================bZIP_DOF<---------ANAC46   ------------>CBF                                <----- -------->AHL20(2)--------->MYB55(2)       <---------ANAC58                                <---------GLK1(2) ---->GT1---------->DOF2  ------->MYC2     <---------ANAC58           ---------->ID1 <------NtERF2<--   aataaaattgaaaaagacgtttggtgcatgtggtgtgggctcttggctggacaattttttgtttttggttttgttgtataaactggctgcatagattatt  12984800                                                                                                <----                                             <---------ANAC58                                   <----                                         <------------CBF                                      <-----                                        --------->ATHB51                                       <-----                                        --------->ATHB12                                      <------                                        <---------ICU4                                      ---------                                        <--------ATHB1                                      ---------                                        -------->HAHB4                                      <--------             <---------AHL20(1)        <---------AHL20(2)                                  --------->ALFIN1         --------->ARR14(2)            <---------ATHB51                                  <---------ANAC46         <---------ARR11(3)            --------->AHL20(2)                       --------->AHL20(1)        <------ZmHOX2a(1)           <---------AHL20(2)                          --------->AHL20(2)       ----------->GT1    ----------->TGA1<---------WOX13(1)                    <---------AHL20(2)  <---------ZAT14         ----------->HVH21  <---------ANAC58  ---------->DOF2 <---------AHL20(2) ----YAB1<---------ARR14(2)        --------->AHL20(2)    --------->ANAC58      --------->AHL20(2) ---------GT1--------->AHL20(1)    <---------AHL20(2)    --------->ANAC58------>ZmHOX2a(1) <---------AtMYB61   ttactgaagaggatatatattacgagggatgacgaaattaaataattgcttaataacgcatgcacaaaagtattcctctaaattaattgtagagtggttg  12984900 ----------->GT1 --MYB46(1) --MYB83                                                       ---------->DOF2 ----AtMYB61                                             <----------DOF2 ----MYB46(3)                                      <---------ARR11(3)                         <------ --P   --------->AHL20(2)                          --------->AHL20(1)             <---------MYB46(3) >ATHB12<---------YAB1                             <---------AHL20(1)             ----------->GT1 <-- >MYB55(2)       --------->YAB1                    --------->ARR11(3) <---------ARR14(2)  <---------ICU4 -MYB46(3)      <---------YAB1  --------->YAB1  --------->AHL20(2)    --------->ARR14(2) <---------ATHB12   gtctagtaatattatactatgaaaatacagtttatcaaaaaaaaaaaaaaaaaaatattctttgggaaagcgtatttgaacaagtggttaaatcattttt  12985000                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                               ------                                                                                              -------                                                                                            ------->MYC3                                                                                            <-------MYC3                                                                                           --------->TGA1a                                                                                           --------->O2                                                                                           ==========                                                                                           ==========                                                                                           <---------O2                                                                                           <---------TGA1a           --------->AHL20(2)                                                            <---------ALFIN1       <---------TOE2(3)                                                              --------->ANAC46       <---------TOE1(3)                                                              --------->ANAC58       <---------YAB1       --------->YAB1                                 --------->MYB46(3) <------ ---AHL20(2)          <---------ARR11(1)                          ---------->DOF2     --------->ANAC58 -------YAB1<---------AHL20(2)---------->DOF2 --------->YAB1      ===================================bZIP_DOF   tttatagctaagattaaatctccaaatctataaaaaggcctaaaccaataagaaaactattctttcaccaaaggagaaccactatctcaccccacatgtg  12985100  Previous    Next  AGI:  At1g35350.1    Description:  similar to SHB1 (SHORT HYPOCOTYL UNDER BLUE1) [Arabidopsis thaliana] (TAIR:AT4G25350.1); similar to EXS family protein / ERD1/XPR1/SYG1 family protein [Arabidopsis thaliana] (TAIR:AT1G26730.1); similar to ATP binding / ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G14040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68453.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68461.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73334.1); contains InterPro domain SPX, N-terminal (InterPro:IPR004331); contains InterPro domain EXS, C-terminal; (InterPro:IPR004342) Range:  from: 12981229    to: 12984561    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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