Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------ATHB12                                              --------->ANAC58                                              --------->ANAC58                                          --------->ANAC58                                          --------->ANAC46                                          --------->ANAC55(1)                                          --------->ANAC55(2)                                  <---------ARR14(2)       ----------->GT1                                <---------MYB46(3)        ----------->GT1                              <---------MYB52(1)--------->YAB1                             --------->LBD16 --------->WOX13(1)                                    --                           <---------LBD16<---------ANAC55(2)           --------->YAB1            ---                        <---------ANAC58  --------->ANAC58<------MYB46(1)                    --------       --------->ZAT6   <---------ANAC58 --------->SPL7   <------MYB83 <-------TEIL --------->YAB1<--   aatggtttacctctaacaagttttttgcttccggtggattccatacgcaatcaacatggaaggttaaattacattcatggcatctataagaaaactcata  12941100                                                                                                    <                                                                                                    -     ------>MYB46(1)                                                                               --     ------>MYB83                                                                                  <-  --------->HSFB2a(1)                                                                              <-  <---------HSFB2a(1)                                                                             <--  <---------HSFC1(2)                                                                              ---  --------->HSFC1(2)        <---------ARR14(2)                     <---------bZIP60(2)            <-- -------->P                 --------->ARR14(2)           <---------ANAC58                        <--- ------>MYB46(1)       ---------->DOF2                   <---------ANAC58                        <--- ------>MYB83     <-----------TGA1                      <---------ZAT2                          <---- ----->GAMYB      <-----------HVH21                     <---------At4g35610       <---------YAB1<---- ------>MYB46(3) <---------ANAC58                     <---------ZAT18    <---------HSFB2a(2)    <---- ->YAB1       ---------->CDC5                         --------->ZAT18    --------->HSFB2a(2) -------- -------MYB52(2) <---------ANAC58        ------>ZmHOX2a(2)      --------->ICU4 --------->ICU4<-------   accaaccttccaacgcttagcgtcacaaaggaactggctctgatccttgagaagagtgagcttgtgatgatgtgtctcgaaattatcaataacctctggc  12941200       ----------->HVH21     <---------ANAC58     <---------ANAC58 <------MYB83 <------MYB46(1) ---------MYB46(3) -------->MYB55(2) ------->ALFIN1 --------ANAC46                          ------>ZmHOX2a(2) --------MYB55(1)                       <------ZmHOX2a(2) -----GAMYB                             --------->GLK1(1) ------>ATERF1(1)      <---------ALFIN1--------->ARR14(2) ----NtERF2          <------ZmHOX2a(2) --------->ARR11(3) ------MYB46(3)      --------->CCA1(2) <---------ARR11(3) ------DEAR3(2)     <---------ARR14(2) <-----------ARR10 -----ANAC46        --------->ARR14(2) <---------ARR14(3)    <-------TEIL -----DREB2C(2)     --------->ARR11(3) <---------AGP1       <------ZmHOX2a(2) -----DEAR3(1)      <---------ARR11(3) <---------ARR14(2)  --------->AGP1 <-----------HVH21  <------- --->HVH21--------->ANAC46            <---------At4g35610  --------->ARR11(3)    ---------->DOF2<---- ----RAV1(1)        --------->AGP1    <---------CCA1(2)    <---------ARR11(3) <---------ANAC55(2) <--   ggtgggtacttgacgcagtatagatccacatcgaagttgcagatctcacaacgatagcatagatccatgatgctcttgtcacataaatcacatctatgtt  12941300                                                        <---------At4g35610                                                  <---------AHL20(2)                                                 <---------AHL20(1)                                                 --------->AHL20(1)                                                 --------->AHL20(2)                                                 <---------AHL20(2)                                             <---------AHL20(2)      <----------DOF2                   --------->ARR14(2) ----RAV1(1)            --------->ZAT18 --------->ARR11(3)           <---------ALFIN1---------->DOF2 -----ANAC46            <---------ZAT14 <---------ARR14(2)    <------NtERF2 <---------ANAC58 -------AtMYB61  ---------->DOF2   --------->At4g35610  --------->At4g35610 <---------ANAC58       <-   gtggtttactttgaagcttcaaagtgtgaacagagtgagatggatattcaatttattcagaggcctcatctacacattgtttgtgaacaaagaagtcaca  12941400                                                                         --------->ANAC58                                                                       ---------->DOF2                            ----------->RAV1(2)                      --------->YAB1                          <---------ARR14(2)                     <---------ICU4                     ----------->GT1               <----------DOF2--------->WOX13(1)                 <---------ALFIN1             <---------ATHB12  <---------ATHB12       <---------ANAC46                --------->MYB46(3)            --------->MYB46(3)--------->ICU4         <---------ANAC58               <<<<<<<<<<<<<<<<<LFY     --------->ANAC46     <---------YAB1            <---------ANAC58               >>>>>>>>>>>>>>>>>LFY   <---------ALFIN1     --------->YAB1--------->ANAC58             <------ZmHOX2a(1)------>ZmHOX2a(1)   <---------DAG2<---------YAB1       <---------YAB1      --------->At5g28300 --------->ARR14(2)--------->WOX13(1)--------->YAB1  --------->YAB1 ---------DOF2--------->ARR14(2)     --------->ZAT18      <---------ATHB12   <---------YAB1         -   actttcgcagtaataggaaccactggtaaatcctgagcgtccacagcaatcaccttttcaatgataatcattcaaaagcatcataagatgcttgtggatt  12941500                  --------->At4g35610                  <---------At4g35610                                                    ---------->DOF2          --------->ANAC58                                                           --------->ANAC58          --------->ANAC58                 *TSS                      >>>>>>>>>TBF1   --------->ANAC58        <---------ALFIN1                --------->ARR14(2)        <xxxxxxxxxxxxxxxxsmallRNA(i)        --------->ZAT6          --------->ZAT14                   >>>>>>>>>TBF1  --------->YAB1     ----------->HVH21          --------->ARR14(2)             >>>>>>>>>TBF1  --------->YAB1     <---------ZAT6             <---------ARR14(2)      <------ZmHOX2a(1)  ----------->RAV1(1) -------->YAB1  <-----------RAV1(2)     <---------ARR14(2) <------ZmHOX2a(1)------------>CBF   aatggtagtgacactccctcagatgccatggtcgtatactcgtatacttacaagattaggaggaagaagaagaagaacaacaataacaagaaaaagaaga  12941600             --------->HSFB2a(2)             <---------HSFB2a(2)           ----------->GT1            =======================HOX2a_HOX2a                 <------ZmHOX2a(1)            ------>ZmHOX2a(2)           --------->YAB1        <----------ID1           <------ZmHOX2a(2)           <---------YAB1        <---------TOE2(3)           ========================HOX2a_HOX2a        --------------->AGL15               <---------MYB46(3)          --------->ARR14(3)         <------------CBF <---------------AGL15          --------->At4g35610          --------->ARR11(3)       --------->ARR11(3)<-----------------AGL3          <---------At4g35610          <---------ARR11(3)    <---------WOX13(1)   ----------------->AGL3      <-----------HVH21          <---------ARR14(3)   <------------CBF    <-----------GT1             <<<<<<<<<SUP         --------->GLK1(1)  ------>ZmHOX2a(1) --------->AHL20(2)        --------->At4g35610 <--------   ------->TEIL            --------->TOE2(3)  <---------AHL20(2)        <---------At4g35610 <--------   agttgaatctgagatctcgaaactatgctccttaattgatattgatagttaaataactaaattaaggacgaagtagcagacactgtcagtagccgttgat  12941700                                 <---------------AtSPL8                           -------->ATHB1                           <---------ICU4                          <---------AHL20(2)                              --------->AHL20(2)              --------->PCF2 <---------YAB1                               <---------AHL20(2)         ---------->DOF2  <---------ATHB51                              <<<<<<<<<MYB98   ---------->DOF2        --------->ICU4 ----------->GT1 --------->YAB1----------->GT1 -------------WRI1        --------->AHL20(2)        <-------TEIL<---------AHL20(2) -MYB52(1)   <------ZmHOX2a(1) --------->YAB1 --------->MYB52(1)--------->AHL20(2)   gaaaacaaagtgaaaggacccataagaaattattaatagtacatggaaaaacggtccattgacaatttatatatgttaaattagcatcaactagtatgtc  12941800                   <---------At4g35610           <---------MYB52(1)                                                        --------->AHL20(1)       <---------At5g28300                            <---------GLK1(1)              <---------AHL20(1)      <---------WRKY38(1)                          --------->ANAC58                  <---------ARR11(3)     ----------->HVH21                             --------->ANAC58                  --------->ARR11(3)    <-----------HVH21 --------->ZAT14          ---------->DOF2               --------->AtLEC2       <   --------->bZIP60(1)<---------ZAT14       --------->TOE1(3)           --------->ANAC58            <  <---------TOE2(3)--------->At4g35610      --------->TOE2(3)           --------->ANAC58         <---   cattgaggtcaccgtttattacgctgaactgcaaatttcaaaaaaacctaaaaacgaaatctgactcaagagtcaagacatgcacaatattttgaagttt  12941900          --------->ANAC55(2)          <---------ANAC55(2)          <---------ANAC55(1)       <---------MYB52(1)      <-------GAMYB      <-----------HVH21   <---------At5g28300                             <---------MYB52(1) --------->ZAT14                              <-----------GT1 <---------ZAT14                       <----------DOF2 ---------DAG2                      <---------ARR11(3) ----------DOF2                     <---------AHL20(1)                                    --------->AHL20(2) --------GT1                        --------->ARR11(3)                                  <---------TOE2(3)   cactttaccgttacatgttggaagtcttgaaacttcaatatctttttttttctgtttttttttgttttttgaaaattcagtgtctaagttaatgaaatat  12942000  Previous    Next  AGI:  At1g35270.1    Description:  pseudogene, hypothetical protein Range:  from: 12939557    to: 12941543    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version