Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <-------TEIL                                                                         --------->CCA1(2)                                                                        --------->ARR14(2)                                                                  ------->GAMYB                                                                 --------->ANAC58                             <---------DAG2               --------->GLK1(1)      <------ZmHOX2a(1)      <----------DOF2       --------->MYB52(1)   <---------ARR14(2)    <---------TOE1(3)  ----------->GT1        --------->AHL20(2) --------->ANAC58    <---------TOE2(3)---------->DOF2       --------->YAB1 --------->At4g35610 -----TEIL       <----------ID1      --------->ANAC46     <---------At4g35610                      -- ->DOF2   --------->YAB1  <-----------GT1--------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <-   tccattaaggaatcaaaatacaacaaagtaactttttccacataaaaataaactaagggcatctccaacgcacagatacagtatgagtttctcaattcta  12866800                                  <---------AHL20(2)                              --------->AHL20(2)                              <---------AHL20(2)                          --------->AHL20(2)                      <---------AHL20(1)                      --------->AHL20(2)                               <---------YAB1                      --------->AHL20(1)                             --------->YAB1                      --------->ARR11(3)                  <---------ARR11(3)                        -                      <---------ARR11(3)           <----------ID1   <---------ATHB12               <-                      <---------AHL20(2)      --------->YAB1       ------>MYB46(1)           <------MYB46(1)                  <---------ICU4  --------->AHL20(2)      --------->ARR14(2)                 <------MYB83               --------->YAB1<---------AHL20(2)  ---------->DOF2   ------>MYB83              xxxxxxxx        ----------->GT1  <---------AHL20(2)  <---------AHL20(2)   --------->WOX13(1)         <-------   <---------AHL20(2)--------->AHL20(2)      <---------YAB1  ----------->HVH21               <------- ------->AHL20(2) <---------AHL20(2)    <---------AHL20(2)<-----------ARR10                 --------- --------AHL20(2)--------->AHL20(2)    --------->AHL20(2) --------->GLK1(2)          <--------P<-----   tttttttaatcagttaataataaatatattatttatttaaattttatattataaagacaaaatctgaccaatcataaataacaaggggttgagttgggtt  12866900                                                                            <---------ARR14(2)                                                                            <---------GLK1(2) -------->YAB1                                                    <---------AHL20(2) --------YAB1                              <----------DOF2        <-----------GT1    --------->AHL20(2) xxxxxxxxxxxxxx>smallRNA(si3)              <---------DAG2     --------->AHL20(2)    --------->AHL20(2) --ANAC58                                 <---------DAG2      <---------AHL20(2) <---------ICU4 --ANAC58<---------------AGL15         <---------ALFIN1   <---------AHL20(2)<---------ARR11(3)  <---- >MYB59  --------------->AGL15   <----------DOF2      <----------DOF2       --------->ARR14(2) <----- ----GLK1(1)                 <----------DOF2          <---------DAG2      --------->LBD16      <-----   tctcatagtttctcatatgagaaacgtttctctttctttctccacctttttcattactttttatttttttaatctccagatactcattaaaaaactgctg  12867000                                             <---------ZAT14                  ------>MYB83               --------->ZAT14                  ------>MYB46(1)          --------->LBD16           ---------->DOF2          --------->HSFB2a(1)        <---------MYB59             <---------HSFC1(2)               ------>ZmHOX2a(1)    ----------->HVH21          --------->YAB1--------->REM1(2)  ------->GAMYB                  <-----  --------->At4g35610    --------->DAG2   <---------ANAC46     --------->MYB46(3)           <--------  <---------At4g35610   ---------->DOF2  <---------LBD16     --------->MYB52(1)            --------->YAB1 ---GAMYB<xxxxxxxxxxxxxxxxsmallRNA(i)--------->KAN4(2)<---------AHL20(2)              ------------>CBF ------RAV1(1)  --------->DEAR3(1)  <---------HSFB2a(1)<---------AHL20(2)         <----------DOF2 ----MYB46(3)  --------->DEAR3(2)   --------->HSFC1(2)--------->AHL20(2)------>ZmHOX2a(1) <---------ATHB12   ttggagatgacctaaaaaccgacccaaaaagtatcagaaaattcccgtgtacaaaatttaatccaacggtcctccttccatctcctttcgcaatcgtcgc  12867100                                                           *TSS                           --------->RVE1(1)   --------->ANAC46                                       <------------CBF               <---------ARR11(3)   --------->ANAC58                           ----------->RAV1(1)                        --------->GLK1(2)   --------->ANAC58                <----------DOF2      --------->AHL20(1)               --------->ARR11(3) <---------ALFIN1               --------->ARR11(3)      --------->AHL20(2)              --------->RVE1(1) ----DEAR3(2)                   <---------ARR11(3)      <---------AHL20(2)              --------->CCA1(1) ---HVH21             <----------ID1    <-----------GT1--------->AHL20(2)             --------->AHL20(2)   tccccactcaaacaaaaaccaaaaaaaacaaaactatcttttaaaccccaacaaaaaaaaaattgaaattcgaaaacagaacaaaaaaaaaaatctctct  12867200                                                <---------ALFIN1                                                --------->AtMYB61                                                --------->DEAR3(1)                                               --------->MYB46(3)                                               <------NtERF2                                              ------>NtERF2                                              <---------ATERF1(1)                                              ----------->RAV1(1)                                             --------->PCF2                                            --------->ATERF1(1)                                            <------NtERF2                                           <<<<<<<<<AtERF-3                                           ------>NtERF2                                           <<<<<<<<<AtERF-4                                           <---------ATERF1(1)                                           <---------RAP2.3(1)                                           <---------ORA47(2)                                           <---------ERF1                                           <---------RRTF1(1)                                          <---------ATERF1(2)                                          <---------RRTF1(3)                       --------->WOX13(1) <---------RAP2.6(2)                      --------->MYB46(3)  <---------RAP2.3(3)            ------>ZmHOX2a(2)             <---------DEAR3(1)           <------ZmHOX2a(2)              --------->bZIP60(1)           --------->CCA1(2)              <---------RAP2.3(2)                                 -------          --------->ARR14(2)              --------->ATERF1(2)    <------NtERF2             ----------          <---------ARR11(3)     ====================================HOX2a_HOX2a        --------->ANAC58          <---------ARR14(2)     ------>ZmHOX2a(2)             <---------DEAR3(1)       --------->ANAC58          --------->AGP1        --------->GLK1(1)             <---------LBD16  <---------ANAC58          <---------AGP1<-----------HVH21--------->RAP2.6(3)  ------>ZmHOX2a(1)<---------ANAC46          --------->ARR11(3)    <------ZmHOX2a(2)----------->RAV1(1)           <---------ANAC58         <---------CCA1(2)      =====================================HOX2a_HOX2a    ------->TEIL   caatctctctcagatctgaatccatccatcaccgatctctaatggcggcaccaccagcatcatcctcggcgagggaagagttcgtgtacctcgcaaagct  12867300                                                                ---------->DOF2                                                            --------->WRKY38(1)                           ----------->GT1                  --------->WRKY12            <---------ANAC55(2)             --------->HSFB2a(1)                    ---------->DOF2                     --------->ANAC58             --------->ANAC58                      ----------->HVH21                    --------->ANAC55(2)             --------->ANAC58                    --------->At4g35610        <---------At5g28300             <---------HSFB2a(1)            --------->DAG2  ----------->HVH21           --------->ANAC58 -->ZAT2   <---------ARR14(2)         --------->AtLEC2     <---------MYB52(1)  <-----------HVH21 >DOF2--------->MYB52(1)   --------->ATHB12---------->DOF2--------->At4g35610 --------->DEAR3(1)  ---   cgcagagcaagcggaacgttacgaagaaatggttgaattcatggaaaaagtcgctgaagccgttgacaaagacgaactcaccgtcgaagaacgtaatctc  12867400                 --------->ANAC58                 --------->ANAC55(2)                <---------CCA1(2)                       ---------                 --------->ANAC46                 --------->YAB1                            ---------                 --------->ANAC55(1)            <-----------ARR10                        --------->ICU4                 <---------ANAC55(2)            --------->GLK1(2)                <---------ANAC46    <---------MYB52(1)                    --------->LBD16                        <---------ANAC58   -   <-----------HVH21       ------>NtERF2  ------>ZmHOX2a(1)                      <---------ANAC58 ---  --------->ANAC46     <---------DEAR3(1)<---------LBD16                        <-------------------- --->ZmHOX2a(1)  --------->ANAC58     <----------DOF2                ---------->DOF2   <---------DOF5.7(2)   ctctccgtcgcttacaaaaacgtaatcggcgctcgtcgtgcttcctggagaatcatctcttccattgaacaaaaagaagagagtcgtggtaacgatgacc  12867500                       --------->ANAC58            --------->LBD16           <---------ANAC58           <---------ANAC46           --------->ANAC55(2)    <---------ARR14(2)           <---------ANAC55(1)    --------->ARR14(2)           <---------ANAC55(2)    ------->TEIL    <---------ARR14(2)         <------ZmHOX2a(2)        --------->GLK1(2)        <---------ARR14(2)        <-----------ARR10    ----------->TGA1 >WRKY38(1)<---------ANAC58      <---------ARR14(1)    ----------->HVH21 >WRKY12--------->ARR14(2)    <------ZmHOX2a(2)   --------->ARR11(3) ---------->HVH21      --------->ANAC58           <---------ARR11(3) ------>O2------>ZmHOX2a(2)  <---------ARR11(3)   --------->GLK1(2)                               <-- ---TaNAC69(2)     <---------HSFB2a(2)            --------->ARR14(2)                          ------>ZmHOX2a(1)   atgtgaccacgatccgtgattacagaagcaagatcgaatctgagttatcgaaaatctgtgacggtattcttaagcttcttgatactagacttgttcctgc  12867600                            <---------------AGL15                            --------->TOE1(3)                            --------->TOE2(3)                           ----------------->AG                           ----------------->AGL1                 <---------TOE1(3)                 <---------TOE2(3)                           <---------At4g35610            ---------            --------->GLK1(2)                       <---------TOE2(2)                   ---------->DOF2           <---------GLK1(2)--------------->AGL15--------->YAB1                        <------ZmHOX2a(1) <---------At4g35610     <-----------GT1        <---------YAB1                --------->WRKY18(1)<--- -------At4g35610<---------TOE1(2) <---------REM1(1)<---------TOE1(2)        <-----------HVH21   ----   ttctgctaatggagattctaaggttttttaccttaagatgaagggagattatcataggtatttggctgagtttaagactggtcaagagaggaaagatgct  12867700  Previous    Next  AGI:  At1g35160.1    Description:  GRF4 (GENERAL REGULATORY FACTOR 4); protein phosphorylated amino acid binding. Identical to 14-3-3-like protein GF14 phi (GRF4) [Arabidopsis Thaliana] (GB:P46077); similar to GRF1 (GENERAL REGULATORY FACTOR 1), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT4G09000.1); similar to 14-3-3-like protein [Thellungiella halophila] (GB:AAM19701.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308) Range:  from: 12867159    to: 12868771    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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