Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 ----------->HVH21                                                        --------->ATHB12              <-----------HVH21   <---------ZAT18                                      <---------ATHB12  <---------AHL20(2)              --------->ZAT18                           <---------HSFB2a(2)  --------->AHL20(2)--------->At4g35610                --------->ANAC46     --------->HSFB2a(2) ->ZAT2     <---------DEAR3(1)   <------ZmHOX2a(1)  ----------->RAV1(1)    ------>ZmHOX2a(2)     <--- --ZAT2<-----------GT1----------->RAV1(1)          --------->ANAC46      --------->ARR11(3)   -------   taatttaaattacctcggtgacagcaacaaaacgaggacgctcgtctgattcaacaccagaaacagaacaagtctgatctcgaagcccaaagattgaatc  12750000                                             ------>NtERF2                                         --------->O2                                         <---------O2                                         <---------TGA1a                                         --------->TGA1a                                      --------->DEAR3(1)                                    ------>NtERF2                                          ------>ZmHOX2a(1)                                    <---------ATERF1(1)                                ------>ZmHOX2a(2)                                   --------->DEAR3(1)                                 --------->GLK1(1)                                   <---------ANAC46 --------->At5g28300               <---------GLK1(1)                                   <---------DEAR3(1)                                 <------ZmHOX2a(2)                                 ==================MYC_MYB                           <-----------ARR10                     --------->ANAC58 <---------DEAR3(1)                             <---------AGP1                     --------->ANAC46 ----------->HVH21                              --------->ARR14(2)         <---------ANAC46        ------->GAMYB      ----------->GT1                  <---------ARR14(2)         <---------ANAC58     --------->MYB52(1)--------->MYB52(1)                   <---------ARR11(3)         <---------ANAC58    ----------->HVH21<------NtERF2                          --------->ARR14(3)     <---------ARR14(2)    --------->TOE1(3) <---------DEAR3(2)                      --------->ARR11(3)     --------->ARR14(2) --------->ARR14(2)  <---------DEAR3(1)                       <---------ARR14(3) <---------At4g35610 --------->ANAC58<------NtERF2 ----------->GT1            --------->MYB46(3) -------DOF2       --------->MYB52(1)--------->ATERF1(1)       <---------ICU4 --------->REM1(1)     - >TEIL--------->GLK1(1) <---------ARR14(2) --------->TGA2(2)  --------->ICU4----------->RAV1(1)    --   tttagcagatttcgtagcacaaaacggaaccctaacggcgtcgacgtcggcaacggttaaaaacatgatgaccaatagcaacaacaagatctccttctcc  12750100                <---------ARR11(3)                                                         ------>NtERF2                --------->ARR11(3)                                                  <-----------RAV1(1)               --------->At4g35610                              --------------->AGL15      <---------RAP2.6(3)             <---------GLK1(2)                            --------->ANAC46          <---------REM1(1)            ---------->DOF2                             <-----------GT1             =================          <---------HSFB2a(2)                    --------->ANAC58             <-----------RAV1(1) -------->AHL20(2)                               --------->ANAC58      ----------->GT1    <---------ETT(1) ------->AHL20(2)               --------->ZAT6   --------->ANAC46 --------->LBD16   <---------MYB46(3)   attaaaaaatacccagaagctctctctctctctatctctatttctctccctacgaaattcacagaacccagaatagaaatttgttgttgttgccgacaaa  12750200                  <---------TOE2(3)                <-------TEIL                                               --------->At5g28300               <--------P                                     <---------CCA1(1)        ----------->HVH21 --------->LBD16  <---------YAB1     <---------RVE1(1)         <---------MYB52(1)       <-----------HVH21 <---------HSFB2a(2)                 <---------ARR11(3)    --------->GLK1(2)      --------->At4g35610--------->HSFB2a(2)     <----------DOF2        --------->At4g35610    <-----------RAV1(2) <---------ANAC46 --------->YAB1<---------ZAT14  <---------At4g35610 ===============RAV     <---------LBD16 <---------ATHB12     --------->ARR11(3)   <---------GLK1(2)--   ttggaaacaggtgagaggttgatgtttctgggaattgaatcaatgatgtttctttactgaagagatatttatgcagcggtaatggaatctgttatttgag  12750300                                   <---------ANAC46                                 <---------ZAT2                                 --------->At4g35610                                 <---------At4g35610                                 --------->ZAT2                          --------->ANAC58                               <---------RAP2.6(2)                ------------>CBF                              <---------At4g35610                --------->ANAC58                              --------->At4g35610              ---------->DOF2                             <---------MYB46(3)              *TSS--------->ANAC58      <---------ARR11(3)             >>>>>>>>>TBF1  <--------P                     <------ZmHOX2a(1)           --------->ARR11(3)          >>>>>>>>>TBF1    <-------GAMYB                 <---------TOE2(2)             --------->GLK1(2) <---------ARR14(2)       <---------MYB46(3)             <---------TOE1(2)          --------->AHL20(2) <---------ARR11(3)      <---------TOE2(3)          <---------ANAC58     --------->ANAC58     ------- --------->ARR11(3)      <---------AtMYB61          <---------ANAC46   ---------->DOF2--------->RVE1(1) --------->ARR10      --------->ALFIN1              <---------ANAC58--------->WOX13(1)--------->CCA1(1)   ggagatattgaagaagaagaagaggttgtggttgctgctgggtactgggttattgctcgtaggaacaaagcaattaagcaaaaaaaaaaaatcttacaaa  12750400                         --------->ARR11(3)        --------->LBD16                         <---------ARR11(3)      <---------LBD16                        --------->RVE1(1)  --------->YAB1                      --------->AHL20(2) --------->AHL20(2)                <---------GLK1(2)    <---------------AGL15--------->GLK1(2)<---------AHL20(2)       --------->ZAT14 --->DOF2  ----------->GT1          <---------GLK1(2)              <---------ZAT18               <---   gtcatgacaaaattagaaaaaaaaaaaaatctaaaccagaatttttaataaaccggagtttttttttagtaaactcagaatttttgcttcaatacgattt  12750500                                                                             --------->ALFIN1                                                                            <-------MYC2                                                                            ------->MYC3                                                                            ------->PIF5                                                                            ------->MYC2                                                                            --------->TOE1(2)                                                                            ------->MYC4                                                                            <-------PIF5                                                                            <-------MYC4                                                                            <-------MYC3                                                                           --------->TGA1a   --------                                                                           <---------ANAC55(2)                                                                           ====================bZIP_DOF                                                                           --------->O2      --------                                                                           ====================bZIP_DOF                         <----------DOF2                                   <---------O2 ----------->GT1                    <----------DOF2    <-----------GT1                     <---------TGA1a   --------                 --------->ARR11(3) <---------ICU4--------->MYB46(3)      ------------>OsbHLH66                 <---------ARR11(3)--------->AHL20(1)                    <---------ALFIN1   <-------- ------YAB1    --------->MYB59     <---------AHL20(1)            <---------CCA1(1)  ---------->DOF2   tgatttcgattttggtttaggtcttttctttataaaaaatattactatatgaacaactaatatttggatatttcaacacgtgggaagaaagagtattatt  12750600                          --------->AHL20(1)                          <---------AHL20(1)                          <---------AHL20(2)                         --------->AHL20(2)                         --------->YAB1                         <---------AHL20(2)                  <---------AHL20(2)                 <---------YAB1                  --------->AHL20(2)           <---------AHL20(2)              --------->AHL20(2)              <---------MYB52(1) ->ATHB12     <---------AHL20(2)            <---------ZAT6 >ATHB1     <----------DOF2                 ----------->GT1                             <---------AHL20(2) ->ATHB51   --------->TOE2(3)        --------------->AGL15                            <---------YAB1 -YAB1<---------ZAT6  <---------ICU4 <---------------AGL15  <---------TOE2(3)      <---------YAB1   gactactagtgtttctttaattaaaaattatattgtttactcaatacagttaattgttatttgagattgtttttttttttatgtttttattaatatgagc  12750700                                                                                      ------>ZmHOX2a(1)                                                                                     <---------ANAC58                                                                                     <---------ANAC46                                                                                <------MYB83                                                                                <------MYB46(1)                                                                                <---------DEAR3(2)                                                                                --------->MYB52(2)                                                                                <---------MYB46(3)                                                                               <---------MYB46(3)                                                                               <---------AtMYB61                                                    --------->AHL20(1)        <---------MYB52(1)                                                    <---------AHL20(2)        <---------MYB55(1)                                        <---------ICU4              --------->ANAC46 <---------ANAC58                                        --------->YAB1       <---------YAB1   <--------P                 --------->ETT(2)      --------->ICU4     <---------YAB1     <---------MYB52(1)           <---------TOE2(3)         --------->YAB1 <---------AHL20(1)       <-------GAMYB     --------->AHL20(1)      <---------YAB1         --------->AHL20(2)     --------->MYB59        <--   attgaaacatattaagttatcgacactgtttatatttgaccataatggtcttaataaattagcattataaacacaattcggttggttccttatgcacaat  12750800              <----------DOF2     --------->ARR11(3)                                       --------->AHL20(2)     <---------ARR11(3)                                     <----------DOF2                <---------YAB1    --------->CCA1(1)                                 ---------->DOF2                 <---------CCA1(2)    --------->RVE1(1)                               --------->LBD16                 --------->AtMYB61  --------->YAB1                                   --------->ANAC46          <-----------GT1  <------ -------YAB1 <---------DAG2                       <---------LBD16 <-----------GT1--------->ANAC46   acgataatatctctcccttttgcagagttcaagtcttcttcaatacagtttttccgcaaagtctttatatacagttttttttcccaccatatcatgcttt  12750900  Previous    Next  AGI:  At1g34780.1    Description:  ATAPRL4 (APR-LIKE 4). similar to ATAPRL6 (APR-LIKE 6) [Arabidopsis thaliana] (TAIR:AT4G08930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61714.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain (InterPro:IPR013766) Range:  from: 12748549    to: 12750361    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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