Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->ANAC46                       --------->ANAC55(2)                       <---------ANAC55(2)                       --------->ANAC58                  --------->At4g35610                 >>>>>>>GRF7--------->bZIP60(2)                <-----------RAV1(2)              <-----------HVH21             --------->bZIP60(1)             <---------bZIP60(1)                                 --------->GLK1(2)             <---------TGA2(1)                        ------->GAMYB    --------->ANAC58   --------->ANAC58             --------->ZAT2           ----------->RAV1(1)    --------->ANAC58<---------ARR14(2)             <---------ALFIN1       --------->ANAC58    --------->ANAC46--------->ARR14(2)    --------->ZAT14       <---------GLK1(2)     --------->At4g35610 --------->TOE1(2)<---------At4g35610     <---------ZAT14  ---------->DOF2--------->ANAC58 ->GT1       --------->TGA2(1)    ------>NtERF2   <---------ALFIN1        --------->ANAC46   aaacacacgaaggtgatgtcaggttacgctacgtcccgacttactgtagtccccaactcccaaaaggaatctttataagcaacatatcagttgaataaca  12652200                                                                   --------->ZAT18                                                                   <---------ZAT18                                                                  --------->DEAR3(1)                                                               <---------ARR14(2)                                                               <---------GLK1(2)    <------MYB46(1)                                                            --------->YAB1          <------MYB83                                                          ------>MYB46(1)          --------->MYB46(2)                                                          --------->MYB52(1)       --------->MYB59                      <---------ATHB12 --------->ANAC58   ------>MYB83       ------>MYB83----------->GT1                      <---------AHL20(2)                --------->AtMYB61    ------>MYB46(1)                      --------->AHL20(2)        <-----------GT1--------->ARR14(2)<---------MYB52(1)                      <---------ATHB51 --------->ANAC58 <---------MYB59     ----------->RAV1(1)   agtgagatttagtcgaaattacaaataattcatatcaaggcaagcaagttttactagaccaaacagaaccgcgcttaccaacagtttggtatggaaacta  12652300                            --------->YAB1                   <---------ANAC58                                             <------ZmHOX2a(1)                   <---------AtLEC2                                        --------->YAB1          <-                   <---------ANAC46                                  --------->TOE2(3)             --                   <---------ANAC58                               <-----------GT1  <---------ARR11(3)                  --------->ATHB12                              --------->AHL20(2) --------->ARR11(3)   gacactactaatcttgctattgcttggcaataaccattagagaacaagtctcatctatgtgtccaatttaacttcaatcttaggagatttttcaagaaga  12652400                              --------->O2                              --------->TGA1a                              <---------TGA1a                              <---------O2              <---------GLK1(1)                    <-------            >>>>>>>>>MYB98    ======================MYC_MYB                            <-----------GT1    --------->At4g35610   <-----------HVH21             --------->GLK1(1)     --------->At4g35610    <---------At4g35610  --------->ANAC46   ------->GAMYB                     --------->GLK1(1)------ --------At4g35610  -------->P===============================================bZIP_DOF ---------->DOF2 ------->At4g35610  ====================MYC_MYB--------->ANAC46   <----------DOF2    ---------->DOF2<   gagcttagctcagtaacatagctaccccagtcacttgtggcattaacacccgaaccagaaatcccttcctttgtagtcagagctccataaaaccgcttca  12652500                                                                                                    <                                                                                               ------     <---------ZAT14                                                                          <------     --------->ZAT14    --------->ANAC46                                                      ------- ---DOF2               ------->TEIL                                                           <------ --->ATHB12 ---------->DOF2--------->MYB52(1)               <---------ANAC58           <---------At4g35610 ---------RAP2.6(2) --------->AtLEC2                        <---------ANAC58 <----------DOF2 <-------   ttgcgacttcagtcgaaagagcatgcacataactgtgtaatctctgaaacttctctctagtttcttgctcatcgataagcttttctctaagctcatccgg  12652600        <---------ZAT2        <---------At4g35610   --------->ANAC58   --------->ANAC58  --------->GLK1(1) ---------->DOF2  --------->YAB1                                           --------->ANAC58 ------ZmHOX2a(1) --------->TOE2(3)                  <-------MYC3          --------->ANAC58 --->LBD16       ----------------->AG      ---------->DOF2            --------->YAB1 ---LBD16<---------ALFIN1          ------------>CBF --------->O2     <---------ATHB12 -->HSFB2a(2)    <---------------AGL15  --------->AHL20(2)     ----------->TBP                  <---- ---HSFB2a(2)  <-----------GT1     --------->MYB46(3)------->MYC3--------->AHL20(2) <---------At4g35610 --LBD16<------NtERF2        <------------CBF       <---------O2 <---------AHL20(2) --------->At4g35610   gaggaaagccagcacattaaccatattagaaaattgaaccaatataaaagagacatgtgtctcatatataaatcatcaagcctcttagctaagagttttt  12652700                                                                                                    -                                                                                                    <                                                                --------->ARR14(2)                 --                                                               <------ZmHOX2a(1)                   <-                                                             <---------TOE2(3)                     <-                                                         <------------CBF                        ----                                                      ------>MYB46(1)                  --------->ANAC58                                                      ------>MYB83                     --------->ANAC46                                                   <---------HSFB2a(1)                 --------->ANAC58                          --------->YAB1           --------->HSFB2a(1)         ------------>CBF  ---- -------GT1            <----------DOF2           <-----------GT1<---------ARR14(2)     --------->AtLEC2   tctaattctctctcttcatattctactttcatatgcataagaactatctaaaaaccttccattgaggatgctctaagcctaaacaatccaagcaaacaca  12652800          ------------>CBF     <---------At4g35610     --------->LBD16                                                                               <-     --------->At4g35610                           <------ZmHOX2a(2)      --------->MYB52(1)  ------- -------->GLK1(1)                                 --------->ARR14(2) --------->ANAC58        <------- ---------GLK1(1)                                 <---------ARR14(2) --------->ANAC58       <-------- ------->ARR11(3)                         <---------ANAC46         <---------AtLEC2      <---------ANAC58 --------ARR11(3)                    <----------DOF2               <---------ANAC58      <---------ANAC58 ----------ARR10                  --------->ARR11(3)               <---------ANAC58  <----------DOF2 ----->ANAC58    <----------ID1   <---------ARR11(3)       <---------AHL20(2)        ------>ZmHOX2a(1) ----->ANAC58  --------->YAB1     xxxxxxxxxxxxxxxx>smallRNA(i)   <---------YAB1    ------>ZmHOX2a(2)   agaactccgctaaacaatgagaacaaatttgtaagagttctttggcgaagacgatccctaattcattatgcatgccaaactgtgatcctttccttgcgga  12652900                                                                   --------------->AGL15                                                                  --------->REM1(1)                                                                  <---------TGA2(1)                                   ---------->DOF2                --------->bZIP60(1)          --------->At4g35610 --------------->AGL15               <-----------------AGL1          <--    ----------->RAV1(2)       <---------------AGL15               <---------bZIP60(1)            <---    --------->At4g35610     <---------At4g35610              ----------->GT1                  -------   <-----------RAV1(1)      --------->At4g35610             --------->DAG2                   <------- --------ZAT14       <------------CBF                      ---------->DOF2----------->GT1  ---------- -->LBD16 <---------At4g35610 =====================================================MADS_MADS -------- --ANAC46 <---------ZAT2 <---------ANAC58      ----------->GT1   <-------TEIL         --------->AHL20(2) -LBD16   --------->ZAT2 <---------ANAC58     <---------TOE2(2) <-----------GT1    <----------DOF2<--   gagaactgctggagctgaagagaaattgcctgctcaaaaaagcatgcctaggtaaaatttgaaaagttacatcatatggtcatttctttaaaataaagat  12653000                                                                               --------->ATHB12                               <---------ARR14(2)                             <---------YAB1 <---------MYB46(3)            --------->ARR14(2)                          <-------TEIL           <-- ----MYB46(1)          --------->CCA1(2)                          <---------ANAC46                <-- ------AtMYB61        --------->ARR11(1)                        <------MYB83  --------->ICU4 <------- -->ATHB12            --------->ARR14(2)                        <------MYB46(1)<---------ICU4-------- --YAB1               --------->ARR11(3)                       <---------AtMYB61          <---------ANAC58 >DOF2                <---------ARR14(2)           <----------DOF2<---------REM1(1)       <---------ANAC58 ->ICU4             ----------->ARR10   <---------MYB52(1)     <---------MYB46(3)   <---------YAB1<-- ----MYB83<---------AHL20(2)<---------ANAC46<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------WOX13(1) <   tggtggttctattcaatttgaaaagatttggcgaataggtctgtttggcaacgctttctcttgagttggtgtagaagtccatgattgtcaatgcgttttt  12653100  Previous    Next  AGI:  At1g34550.1    Description:  EMB2756 (EMBRYO DEFECTIVE 2756). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G09630.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72342.1); contains InterPro domain Protein of unknown function DUF616 (InterPro:IPR006852) Range:  from: 12646674    to: 12652624    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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