Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  <--                                                                                                  <--        <---------HSFB2a(2)                                                                       --- --->ZmHOX2a(2)                                                                       <---------ANAC46 ------GLK1(1)                  ------>ZmHOX2a(1)        -------->HAHB4            <---------ANAC46 ----->GLK1(1)                 <---------MYB59           --------->ATHB12         <---------LBD16 <-- -----ARR14(2)        --------->ANAC58                   --------->YAB1           --------->At4g35610 -----AGP1            --------->ANAC58              ------>ZmHOX2a(1)            --------->MYB52(1) - ---->ARR14(2)     <------ZmHOX2a(2)               --------->TOE2(3)          <---------REM1(1)   <-- ---->ARR11(3)     ====================HOX2a_HOX2a --------->TOE1(3)       ----------->HVH21     <--- -----ARR11(3)    <-----------ARR10            --------->GLK1(1)         <---------ANAC46        <--- ----CCA1(2)      --------->ARR11(3)           <---------GLK1(1)         <---------ANAC58       <---- ---MYB46(3)     <------ZmHOX2a(1)     --------->YAB1   <---------YAB1   <---------ANAC58--------->ZAT14 ->ALFIN1  ---------->DOF2   ---------->ID1  --------->ATHB12          <------ZmHOX2a(1) <---------ZAT14   tctctgagccctagaaagaggatcaagccttgtcctaactatcatcttgatttccttaatgatagaagtagtaggacgtgaagtagcggagtgaagacgt  12592300           >>>>>>>>>E2Fc           ----------------->AGL3           ========================================================================MADS_MADS           >>>>>>>>>E2Fd          --------->LBD16         --------->ANAC58         --------->ANAC58         --------->ANAC46        <---------LBD16    ------>ZmHOX2a(1)                                                              --------->ZAT2 ------>MYB55(2)                                                                   <---------ZAT2 ----MYB83------>NtERF2                                                            --------->At4g35610 -------DEAR3(2)                                                              --------->At4g35610 ------>MYB52(2)                                                              <---------At4g35610 -------MYB46(3)                                                         --------->HSFB2a(2) -------->ARR14(2)                                <------ZmHOX2a(1)      <---------HSFB2a(2) ----MYB46(1)                               <---------ANAC58       <---------------AGL15 ------TOE2(2)                       --------->ICU4          <----------TaMYB80    <---------At4g35610 ------TOE1(2)                   ----------->GT1<---------TOE2(3)  ------>ZmHOX2a(1) -----MYB52(1)    <---------------AtSPL8    <---------ANAC58--------->ARR11(3)--------->ZAT2    -----   tggttcctctcccgccaaatgaagtacaatgaggctggaaaaattagcttgaggatgagagtgatattcctgtttctagcagctaagctggaattttaca  12592400                                                                                            ---------            --------->ATHB12                                                                <--------            --------->ATHB51                                                                <------ZmHOX2a(2)           <---------YAB1                                                                  <---------ARR14(2)      ----------->GT1                                                                      <---------ARR11(3)     <---------TOE2(3)                                                     <---------AHL20(2)------>ZmHOX2a(2)     --------->DAG2                                                    --------->YAB1      --------->ARR14(2)     <---------TOE1(3)                 <-----------GT1                <---------YAB1       --------->ARR11(3) ----->DOF2--------->ICU4      <----------DOF2     <---------YAB1 <---------ATHB12         <---------AGP1   aagaggtaaggttattattgattcagatttagactttagtttttccaaatgtttcgattgaaattccaatctatgattttttttgtttgaacagatctct  12592500                                                                                               <-----                                                                                               ------                                                                              --------->YAB1   <-----                                                                              <--------HAHB4   ------                                                            >>>>>>>>>RAP2.2   --------->ATHB51 <-----                                                         <---------CCA1(2)    <---------ICU4   <-----                                                     <---------AHL20(2)       -------->ATHB1   ------                                                --------->AHL20(1)           --------->ICU4    ------                                                <---------AHL20(1)           <---------ATHB12  ------     --------->YAB1                  <---------ICU4  --------->AHL20(2)      <---------ATHB51  ------     <--------ATHB1     --------------->AGL15   --------->AHL20(2)   --------->ATHB12        <-------    <---------ATHB12    <---------------AGL15   <---------AHL20(2)  <---------YAB1    <---------TOE2(3)    --------->ICU4     --------->TOE2(3)       --------->AHL20(2) <---------ICU4 --------->ATHB12 >GLK1(1)        --------->ANAC58   --------->ICU4 <---------YAB1 --------->YAB1 --------->ATHB51 -GLK1(1)        --------->ANAC58<--------P    <---------AHL20(2)--------->ICU4 <---------YAB1 <-----   tgagcaatgattttcaagaacccaatcttatatgggtaagtattgctaattttatttttatatctaaattatgatttcaattattattgagaatattacg  12592600                                      <----------DOF2                                --------->MYB59                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                           ------>ZmHOX2a(1)                          <---------MYB59                          --------------->AGL15                          <---------------AGL15                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                 <-----------GT1                         <-----------------AGL3                           --------->ANAC55(2)                         ----------------->AGL2                         <-----------GT1                         ----------------->AGL3                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ----ANAC58              ==============================MADS_MADS      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) --->ANAC58              =============================MADS_MADS      <---------YAB1 ----ANAC58              ----------------->AG                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) --->ANAC58              <-----------------AG                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ----ANAC55(1)           <-----------------AGL2                     --------->AHL20(1)           <xxx ----ANAC46              <-----------------AGL1                    <---------AHL20(2)           <xxxx ----->GT1           --------->MYB59  <---------------AGL15       <---------AHL20(1)        xxxxxxxxx --->ANAC55(1)       --------->MYB52(2) --------->AHL20(2)        --------->AHL20(2)    <-----------GT1 --->ANAC55(2)  <---------TOE2(3)     --------------->AGL15    --------->AHL20(2)<---------At5g28300 --->ANAC46     <---------TOE1(3)    <-----------------AGL3  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <- ----GT1<----------DOF2  ----------------->AGL1    ----------->GT1<---------AHL20(2)<xxxxxxxxxxxxxxxx ----ANAC55(2) ---------->DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->AHL20(2)<----------DOF2   taattagagactttttttaaagttagttcctaattaggcactttaaatggagaaggtaatttagataaattattttacttatttaccctttaactacatt  12592700                                                                                             xxxxxxxx                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             <-------                         <----------DOF2                                                     <-------                         <---------DAG2                                                     ---------            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                           ---------           <---------CCA1(2)                            <-----------GT1                   <---------GLK1(2)          <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <----------DOF2                     --------->LBD16          xxxxxxxxxxxxxxxxxx>smallRNA(se3)       <-----------GT1                       <---------HSFB2a(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <------------------------ANAC81           --------->HSFB2a(2) xxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <----------DOF2                              --------->HSFC1(1) xxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------CCA1(2)---------->ID1                      <---------LBD16 xxxxxxx>smallRNA(i)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                        <----------DOF2 ----------GT1         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------DAG2    <---------DAG2  ---- xxxxxxxsmallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <----------DOF2<-----------GT1--------   ttttccatcggccatctcttctctctccttttcccatctcttctctttttttttcttttttctcactttatcgaagaaaaaaaccttttccagaatatct  12592800        xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       --------->GLK1(2)       <---------ARR14(2)       --------->ARR14(2) xxxxxxxxxxxxxxx>smallRNA(fl3) ->ARR11(3) --ARR14(2) ->ARR14(3)                         --------->ANAC58                            <---------ARR11(3) --ARR14(3)               --------->ARR14(2)<---------ANAC58                <---------TOE1(1)       - --ARR11(3)               <---------ARR14(2)<---------ANAC58                <---------TOE2(1)     >>> >CCA1(1)       --------->AHL20(2)  --------->ANAC46                     <---------ARR14(2)       <-- >RVE1(1)       <---------AHL20(2)  --------->ANAC58                     --------->ARR14(2)     <---- -------->CBF  <---------ATHB12--------->ZAT6<----------DOF2     <------------CBF         <---------ANAC46 ->ARR14(2)------------>CBF    --------->ANAC46                 --------->ATHB12--------->ARR11(3)>>>   tcaattccaaatctgcaattaatctccaaatccacactacgcgatggctttctcttctctctagactaattggagaatacgaggtcttggtttcttataa  12592900                                                                                            ---------                                                                                          <----------DOF2                                                                                          <xxxxxxxxxx                                                                                          ===========                                                                                         <---------ANAC58                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                                                        <------NtERF2                                                                                        xxxxxxxxxxxxx                                                                                       <---------RAP2.3(1)                                                                                       <xxxxxxxxxxxxx                                                                                       ------>NtERF2                                                                                      <---------RAP2.6(2)                                                                                      <---------ANAC46                                                                                      <---------DEAR3(1)                                                                                      <---------RAP2.3(3)                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                               ------------>CBF                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                         <<<<<<<<<TBF1xxxxxxxxxxxxxxx                                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <---------AHL20(2)                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <---------AHL20(2)                                              <<<<<<<<<TBF1   <---------RAP2.3(2)      --------->AHL20(2)                                        --------->HSFC1(2)xxxxxxxxxxxxxxxx>smallRNA(s)  <---------YAB1                                                <---------HSFC1(2)xxxxxxxxxxxxxxxxxxx ---------->GT1                                                 --------->HSFB2a(1)  --------->RAP2.6(3) >>>>>>ARR1                                                 --------->ANAC46<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----------CBF         <---------AHL20(2)            <---------MYB52(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -----TOE2(3)      --------->AHL20(2)            <-------TEIL   <---------HSFB2a(1) xxxxxxxxxxxxxxxxx >>>>>>ARR2        <---------AHL20(2)           --------->GLK1(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   gattgtgatttattttgaaatttaaatatttgttttgacttaaatttgagattcagttatctaagaaacttcttcttcttcaacaatggcggcttgattt  12593000                 <---------TGA1a                 <---------O2            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)   <-----------GT1 >ATHB12   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxsmallRNA(s)xxxxxxxxxxxxxxxx>smallRNA(i) ==========================bZIP_DOF xxxxxxxx>smallRNA(fl3) xxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxx>smallRNA(l2)                                  --------->LBD16 xxxxxxxx>smallRNA(le3)                                 ----------->GT1 xxxx>smallRNA(le3)                                    <---------ANAC46 xx>smallRNA(le3)--------->TGA1a                      <---------LBD16         --------->YAB1 x>smallRNA(si3) --------->O2                       --------->ARR14(2)       <---------YAB1 xxxxxxxx>smallRNA(si3)                             <---------ARR14(2)<---------ANAC58 xxxx>smallRNA(fl3)                                 --------->GLK1(2) <---------ANAC58       -------- xxxxx>smallRNA(i2)   xxxxxxxxxxxxxxxx>smallRNA(i) <---------GLK1(2)--------->ARR11(3)   xxxxxxxxxxxx   gatttttgctctctctctcatgtgtcaaactcgtttcatctatgtagcatcgagattccggttaatcgaatttcttgttatcatggacatggtatacaga  12593100                                                 <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                ----------->GT1                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                      <---------AHL20(2)       --------->AtMYB61                                      --------->AHL20(2)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 <---------TOE2(3)<---------AHL20(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      xx           --------->At5g28300   <---------ARR11(3)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxx        <---------ZAT14          <---------AHL20(1)  --------->ICU4         <-------GAMYB   xxxxxxxxx        --------->ZAT14<---------HSFB2a(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        xxxxxxxxxxxx  --------->CCA1(2) <---------GLK1(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  --------->MYB52(2) xxxxxxx ->ANAC46 ----------->GT1        --------->ARR11(3)  <---------YAB1        <---------MYB46(3) xxxxxxx xxxxxxxxxxx>smallRNA(i2)    ----------->GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <-----------GT1   atggatatagagcagtaaaaaggtttccgaagggatatatttaaatggactcgttattatggacaccaaaacattgtttgttgattttgttacagtttgc  12593200  Previous    Next  AGI:  At1g34440.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G05095.1) Range:  from: 12591326    to: 12592715    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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