Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------ARR11(3)              --------->ANAC46                            <-----------RAV1(1)      --------->ARR11(3)              --------->ANAC58                       --------->CCA1(2)            --------->CCA1(1)             <---------ZAT18                      <---------ARR14(2)     ----------->GT1                  <---------AHL20(2)                      --------->ARR14(2) --------->AHL20(2)                  --------->AHL20(2) ---->AtMYB61   <---------HSFB2a(2)      <---------AHL20(2)       --------->AHL20(2) --------->ANAC58 -GT1     <---------YAB1<-------TEIL<---------ANAC46--------->RVE1(1)     --------->AHL20(2)   aattcgaacatcaaaattgtagaagatacaatgttgttgtttataaattgtcaaatatctagttgaaataaaacaaatatttaatgcacacaatattcaa  12550000                                                                                   --------->TOE1(2)                                                           --------->ARR11(3)  <---------AHL20(2)                          --------->ICU4                   <---------ARR11(3)  --------->AHL20(2)  <-                     --------->ANAC58                     --------->YAB1   --------->ICU4          <-                     --------->ANAC58                    ----------->GT1 --------->YAB1            <-            --------->ANAC58        <---------AtLEC2   ---------->DOF2   --------->AHL20(2) ------>MYB46(1)            --------->ANAC58       <-------TEIL  ---------->DOF2      --------->YAB1        ------>MYB83   tatttgaagtagccaagtcaaataagcaaaaatgaagtgcatggacagacagaaagagaaagataatacgaataataatatttaaactacgaccaactat  12550100              <---------ALFIN1              --------->ANAC46            <---------ALFIN1           --------->MYB46(3)           <---------MYB55(2)          --------->ANAC58                                                             ------>ZmHOX2a(2)          --------->ANAC58                                                            <---------At4g35610         ------>NtERF2                                                                <------ZmHOX2a(2)        <---------ALFIN1                                                             --------->ARR14(2)     --------->ANAC46                                                                <---------AGP1     --------->PCF2                                                                  <---------ARR14(2)  --------->WRKY38(1)              <------NtERF2                                   <---------DEAR3(2)  --------->WRKY12               <---------DEAR3(1)                             <-----------HVH21 --------ANAC58                 --------->At4g35610                         <-----------GT1   <------ --------ANAC58               --------->MYB46(3)  <---------ZAT6    --------->ANAC58 <-----------ARR10 --------ANAC46             --------->MYB52(1)<---------MYB52(1)    --------->ANAC58<---------CCA1(2)   agcgtagaccccacccacacctctctaaatcaacggctgcgatacaccggtactgttcttgatgcgataaacgcatataaaccgtcggatctgattttac  12550200                                                         <---------AHL20(2)                                                       <---------YAB1                                                     <---------AHL20(2)                                                     -------->ATHB1                     <------MYB46(1)                 --------->AHL20(2)                     <------MYB83                    --------->YAB1                    --------->MYB59                  <---------ICU4                    <---------TOE2(3)                --------->ATHB51                --------->ATHB12                    <---------ATHB12               --------->ICU4                       <---------ATHB51               <---------YAB1                       --------->ICU4            <---------ETT(2)                      --------->WOX13(1)        --------->HSFB2a(1)                --------->TOE1(1)        <---------HSFB2a(1)                --------->TOE2(1)   --------->YAB1<----------DOF2      --------->MYB52(1)              <-----------GT1<--------HAHB4      --------->MYB46(3)    <---------MYB52(2)   <---------WRKY18(1)     --------->AHL20(2)    --------->MYB52(1)--------->DOF5.7(2) -----GT1   <---------MYB46(3) --------->ZAT6   <---------ATHB12   --------->WOX13(1)------->TEIL   ttataaacgaacggtcgatgattaggttgacttactctaatcacctcgtaatcaattattttttctcataaatcaacggctctaatgcatcgttaccatg  12550300                                   <---------WOX13(1)                                  <------------CBF                                 --------->ATHB12                                <---------YAB1                               ------>ZmHOX2a(2)                              --------->CCA1(2)                              <------ZmHOX2a(2)                             --------->ARR11(3)                             <---------AGP1          <---------AHL20(2)                             <---------ARR14(2)      --------->AHL20(2)                             --------->AGP1      <-----------TBP                             --------->ARR14(2)  --------->AHL20(2)                             <---------ARR11(3)<----------DOF2                            <---------CCA1(2) ------>ZmHOX2a(2)                 --------->WRKY38(1)                           ----------->ARR10 <------ZmHOX2a(2)                  --------->WRKY12  <--                         <---------MYB52(1) <---------ARR11(3)                <---------ANAC58  -----                        <-----------TGA1    <---------ARR14(2)                <---------ANAC58 <-----                        <-----------HVH21   --------->ARR11(3)      <---------TOE2(3)        --------        --------->YAB1 --------->DEAR3(1)   --------->ARR14(2) <---------MYB46(3)   <----------DOF2<-   ttcaatgcgataatatggttttgcaccgtcagatctgattgataccgatctttatataatttcaacggttgagattaatgggttgactttacatagggta  12550400                                                     --------->ZAT2                     <----------DOF2                --------->ANAC58                     --------->At4g35610          --------->YAB1                --------->ANAC58                   <------NtERF2                  <---------ICU4             --------->ZAT18                      <---------DEAR4(2)             <---------YAB1    --------->DAG2                                --------->At4g35610          --------->YAB1   ---------->DOF2  ---------->DOF2               <---------At4g35610         <---------YAB1 -------AGP1 <---------ZAT18                 <-----------RAV1(2)            <---------ICU4 ------>ARR10<---------ZAT14               <-----------HVH21  ------>ZmHOX2a(1)<---------ICU4 ---P  --------->ALFIN1                  <---------ALFIN1  ------>ZmHOX2a(1)--------->YAB1 --->GT1     --------->ZAT14  *TSS    --------->PCF2 <---------At4g35610   <---------YAB1 -----ZmHOX2a(2)--------->ANAC46--------->YAB1   <---------DEAR3(1)      --------->YAB1 <---------DAG2   gatcagaaagtggagagcaccccaaagctaataaacatgagccccgctcaggcgctgcttcctcctctctctctatcatcatcatcatcactttctctat  12550500                          --------->ZAT18                 ------>NtERF2                               <---------MYB46(3)                --------->RAP2.6(2)                         <---------ANAC46                  <------            --------->DAG2<---------ZAT18                 <-----------RAV1(1)           <---------AHL20(2)           ---------->DOF2--------->ZAT14        <----------DOF2                <----------DOF2   ctatctctcttcttaaagcggccattggtgctctccaagttccatctcaagcttttcttcttgtgggtgattcaatctctctctttctattttttttttc  12550600                                                                                           --------->ATHB12                                                                                          <---------YAB1                                                                                  <------NtERF2                                                                                 <---------RAP2.3(1)                                                                                <---------RAP2.3(3)                  <----------DOF2                                               --------->ETT(1)                 ------>ZmHOX2a(2)                                              <---------At1g77200               --------->ARR11(3)                                               <---------DREB2C(2)    <---------MYB52(1)   ----------->GT1    <---------ANAC58                   <---------ORA47(1)   <-------GAMYB<---------YAB1              <---------ANAC46              <-----------RAV1(1)  <-----------RAV1(1)--------->ATHB12       <---------ANAC58   <---------TOE1(3)<---------DEAR4(1)  - -----GT1      <---------ARR11(3)<----------DOF2               <---------TOE2(3)<---------DEAR3(1)<--   atttctgttgatttagtgatctttgatttgtgaaactttgtttttatcgtgtttgtttttgatttagggttttattttgttgtcggcgagttttgatttg  12550700                                        <---------ARR14(2)                                        --------->ARR14(2)                                        <---------ARR11(3)                               <------MYB83                      <---------AHL20(2)                               <------MYB46(1)                 <---------CCA1(1)                             <---------MYB55(1)                <---------RVE1(1)                            <---------MYB52(1)       <---------ANAC55(1)                        <---------At5g28300          <---------ANAC46                       <-----------GT1  <---------AGP1        <---------ARR11(3)       <---------YAB1  <---------WRKY18(1)------>ZmHOX2a(2)   <---------GLK1(2)          --------->GLK1(2)    <---------YAB1    ----------->HVH21 --------->ARR11(3)    --------->ARR11(3) <---------ANAC46 -------->ARR11(3)    --------->WRKY12 <---------CCA1(2)    ----------->ARR10    <---------ANAC58 -------YAB1<---------AHL20(2)<---------AtMYB61      <---------YAB1              <---------ANAC58   atgattttgatgatttttttttgtttgaccgtttggtttttggatcttaagagttatgtgtgaagatttttttttgtttgtttgggtgaagaatttgtgt  12550800                                                                --------->YAB1      ------>ZmHOX2a(1)                                                         --------->ALFIN1   --------->ZAT2                                                       <---------ANAC46     <---------At4g35610                                                     <---------ZAT14        <---------ZAT2  <--------                             --------->TOE2(3)       --------->ZAT14        --------->At4g35610 <----                           ------->TEIL             ----------->HVH21  <----------DOF2    <---------YAB1         --------->ICU4   <---------CCA1(2)       <---------ANAC46   ------->TEIL  <---------MYB59  -   tgatttcgataattttgagtttgattttgaatcttagtaatgaaatttgattctgtgaagtgtgtatgatgaactttgagctggtcctaattctgattct  12550900  Previous    Next  AGI:  At1g34370.1    Description:  STOP1 (SENSITIVE TO PROTON RHIZOTOXICITY 1); nucleic acid binding / transcription factor/ zinc ion binding. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT5G22890.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81435.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 12550430    to: 12552607    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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