Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  ------->GAMYB                                                                               <---------MYB55(2)                                                                               --------->DEAR3(1)                                                                               --------->MYB46(3)                                                                          --------->ANAC58                                                                          --------->ANAC46                                                                    --------->LBD16                                                                   <---------------AGL15       ----------->GT1                                             <---------ANAC58       <------MYB46(1)                                             <---------ANAC46 --------->ANAC46       <------MYB83                                                --------->HSFB2a(2)       <---------MYB46(3)                                          <---------HSFB2a(2)    <---------ANAC58                                               --------->ANAC55(2)    <---------ANAC46                                               --------------->AGL15    <---------ANAC58                                               <---------ANAC58--------->MYB46(3)   <------NtERF2                        <---------ANAC58     <---------ARR11(3)<---------MYB52(2) <---------RAP2.6(2)                    <---------ANAC58    --------->REM1(1)--------->MYB52(1) -------AtMYB61                <-----------GT1 <---------ATERF1(1) <---------ANAC55(2)          <---- ---DEAR3(2)         ----------->GT1<----------DOF2  ------>ZmHOX2a(1)    --------->ANAC58    XXXXXXX   atggtggcttggttacataggcatggttacaagtttccctttacttgggatgctcctaaactacatcttccgtaagaagcaacgacccacaacaacatcc  12534000                                                                                       --------->YAB1                                                                                    --------->YAB1                                                                              ----------->GT1                <----------DOF2                                               --------->YAB1           <---------ANAC58                                                   --------->TOE2(3) <----           <---------ANAC58                                         --------->ATHB12<---------ICU4   ------>ZmHOX2a(1)                                               <---------ATHB51--------->ICU4 ----------->RAV1(2)     --------->ARR11(3)         <---------MYB52(1)   <---------TOE2(3)     ------ -----ALFIN1<----------DOF2          <---------ATHB12       <---------YAB1   ----------->GT1   <----- XXXXXXXXXXXXX>MIR2111A/B<---------ARR11(3)   <---------CCA1(2)    <---------YAB1--------->YAB1<-----   acatcctgaagttgctttctttctcaacatctccattcactcattcttctatctgttaacctattatcgattattgagaatgttaataatcatctaattt  12534100                                                                                              ------>ZmHOX2a(1)           --------->YAB1                                                                     =======     --------->YAB1                                                                       <---------ARR14(2)    <---------YAB1                                                                        --------->GLK1(2) -----AHL20(2)                                     --------->ARR14(2)               <---------ANAC46 --->AHL20(2)      --------->ICU4        ---------->DOF2                           <---------LBD16--- ----AHL20(1)    <---------ICU4       <---------TOE2(3)                       <---------YAB1  <------ ----AHL20(2) ----------->GT1    <---------AtLEC2  <---------ARR14(2)    ---------->ID1   --------->ARR14(2)   ttttttatcataagcatagtaattatgtagagttttcatgaaggaaaggagtggaatcgctcaaactcattttttgtcttattatttcggagaatccttt  12534200                                  <<<<<<<<<<MYB80                                 <------MYB46(1)                                 <------MYB83                      --------->YAB1                            --------->ATHB12               <---------HSFB2a(2)                           <---------ATHB12                --------->LBD16                --------->AHL20(2)                      <------ZmHOX2a(2)                    --------->HSFB2a(2)            <---------ARR11(3) ============================HOX2a_HOX2a                   ------>ZmHOX2a(1)              --------->AHL20(1) ------>TOE2(3)      <---------ARR11(3)                   <---------ANAC46                <---------AHL20(1) ----DOF2            --------->ARR11(3)<---------ANAC46   <---------LBD16        <---------KAN4(1)   cattaaaactgacttcgatcgaagatcaaatcatttggtttgagtataagtttagatgttcctggaaaatcatattactctgaataatccaaaatattag  12534300                                                            <---------MYB46(3)                                                         <------MYB83            ------>ZmHOX2a(1)                       --------->AHL20(2)                <------MYB46(1)         --------->LBD16                     <---------MYB52(1)                  ----------->GT1        <---------LBD16     -                    <-------GAMYB               <---------HSFB2a(2)        <----------DOF2    <------                   ----------->GT1              --------->HSFB2a(2)        <---------------AGL15 <---                 <---------At5g28300           <---------LBD16          <-----------GT1    <---------HSFB2a(2)              <----------DOF2   ------->TEIL<---------ARR14(2)       <---------AHL20(2)    --------->HSFB2a(2)   tatgttatctcagtggcattaccgttaaaatatgaaactataagggtattctgggaagttggtgattacatttttttcttttcctggcaacttcgagagc  12534400                                      --------->DAG2                                   --------->ALFIN1                                     ---------->DOF2                                   <---------ZAT6                                <---------ANAC58                                     <---------ANAC58                         --------->GLK1(2)                                           <---------ANAC58        --------->At4g35610     <---------ANAC58                                     <---------ANAC46       *TSS              --------->ARR11(3)                                     <---------ANAC58     --------->ZAT18     <-----------ARR10                                      <---------ANAC58 --------->DOF2          <---------ARR11(3)                                     <---------ANAC46 ---ARR11(3)            --------->RVE1(1)                                      --------->MYB52(2) -------DOF2     ----------->GT1<---------ANAC46           ---------->DOF2 <---------MYB46(3)   ttttaagcgcagaagaaactcgttaaaaatcttggcgagaaaagttgagaactggaatcgaagaagcgatagggttttggttacttggagtgtgagtatt  12534500                                                                                                  ---                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                              <---------DEAR3(1) <---                                                                           ------>ZmHOX2a(2)    <----                                          ----------->HVH21                <---------DEAR3(1)   -----     <---------ALFIN1                   --------->LBD16                   <------ZmHOX2a(2)     <----     --------->AtMYB61                  <---------At4g35610              <---------ARR11(3)     -----    --------->MYB46(3)                <---------LBD16                    --------->ARR11(3)     <----   <---------At5g28300              <-----------GT1                      --------->ARR14(2)    <-----  <-----------GT1               <----------DOF2                          <---------ARR14(2)  --------   ttagttaccaccgcttgcaatttcaaattggtttcttttttccggtgacatttagtaagacaatggaagaaataagatcggcgatggagaagcaagtgga  12534600        --------->ARR14(2)        <---------AGP1        <-----------ARR10        --------->GLK1(2)        <---------ARR14(2)        --------->ARR11(3)       <---------CCA1(2)       <---------ARR14(1)               --------->SPL7     <---------ANAC46                  --------->MYB52(1)                           --------->bZIP60(2)    <---------At4g35610               <---------SPL7                                --------->ANAC58 --->ZmHOX2a(2)                      ----------->HVH21               <---------ANAC58 ------GLK1(1)                   <---------GLK1(1)                   <---------ANAC58 -----ARR14(2)                   --------->GLK1(1)                   <---------ANAC46        <------- ---->ARR11(3)                   --------->ZAT2                    <---------AHL20(2)      --------->ATHB12 -----AGP1------>ZmHOX2a(2)      <---------At4g35610            <---------ICU4      --------->ANAC46 ---->ARR14(2)                   --------->At4g35610         --------->YAB1         --------->ANAC58 -----ARR11(3)                   <---------ZAT2              --------->TOE2(3)    <---------ALFIN1 <- ----CCA1(2)  <--------P    --------->LBD16                 <---------YAB1     <-----------GT1     <- ->ALFIN1<------ZmHOX2a(2)<---------LBD16         <-----------GT1  --------->ARR11(3)------>NtERF2 --   tctcgtagcggatctggttgagaaactctccggagagctccgaacggggtttcaacctgcttacgataatttcttggggtttttccacgccattgattgg  12534700         <---------ARR14(2)         <---------ARR11(3)         --------->GLK1(2)         --------->ARR14(2)         <-----------ARR10         --------->ARR11(3)        <---------GLK1(2)     --------->YAB1 --WOX13(1)                               <------ZmHOX2a(1) -----MYB46(1)                   <------MYB46(1)                  --------->AHL20(2) -----MYB83                      <------MYB83                 ----------->GT1                    <--- --------->GT1              --------->ATHB12         --------->YAB1 <---------GLK1(2)<---------GLK1(2)   aaggtaatgagaatctttcttcgtattgcatcatttggtcttgaggaatttagaatcacaagtctagataaattctcggtatttgtagaatttcatttga  12534800                                                                               --------->TOE1(2)                                                                              --------->HSFC1(2)                                                                              --------->HSFB2a(1)                                                                              <---------HSFC1(2)                                                      ----------->RAV1(2)     <---------HSFB2a(1)                                                      --------->At4g35610   <---------ARR14(2)                                      >>>>>>>>>EIN3   <---------At4g35610   --------->ARR14(2)      <        --------->GLK1(2)  --------->ZAT14      <-----------GT1    <---------MYB46(3)               < ------GLK1(1)  --------->GLK1(2)    <-------TEIL<-----------------AGL1    <------ZmHOX2a(1)        <   attctgtgagaatttgagattccataaactatactcatatacattggttttttctcatctggcattttttggttacaggaaccttggattatgggtttaa  12534900  Previous    Next  AGI:  At1g34340.1    Description:  esterase/lipase/thioesterase family protein. similar to embryogenesis-associated protein-related [Arabidopsis thaliana] (TAIR:AT5G49950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46977.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65148.1); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 12530805    to: 12534140    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g34350.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO46981.1); contains domain PTHR22593 (PTHR22593); contains domain PTHR22593:SF2 (PTHR22593:SF2) Range:  from: 12534407    to: 12536073    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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