Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------YAB1                                                                               <---------AHL20(2)                                                                               --------->AHL20(2)                                                                          --------->AHL20(2)                                                  <---------ICU4          <---------YAB1                                               --------->YAB1             <---------AHL20(2)                                             --------->AHL20(2)        --------->AHL20(1)          <-                                             <---------AHL20(2)        <---------AHL20(1)          --                                            --------->YAB1            --------->AHL20(2)           <-                                         <---------AHL20(2)         --------->AHL20(2)        -------                        --------->AHL20(2) <---------YAB1         <---------AHL20(2)     --------->AHL20(2)     <---------YAB1  <----------DOF2    --------->AHL20(2)        --------->AHL20(2)     --------->AHL20(1) ------YAB1       <---------ARR11(3)    <---------AHL20(2)     --------->YAB1 --------->YAB1 -------- --->AHL20(2)    --------->REM1(1)   --------->AHL20(2)        --------->AHL20(2)        <---------AHL20(2) --->YAB1 <---------AHL20(2)       --------->TOE2(3)      --------->MYB46(3)  --------->AHL20(2)   -- -->ICU4 --------->AHL20(2) <---------AHL20(2)<---------YAB1  <---------ATHB12<---------AHL20(2)   --   taaaactatcatttaatctacatcttttatataaaaacattatttattataatcaattcaaccaataaaaaaatatataattaaaatagaattaattaga  12503000                <---------AHL20(2)             <---------AHL20(2)        --------->AHL20(2)        --------->ARR11(3)        <---------ARR11(3)        --------->AHL20(1)        <---------AHL20(2)                                                                     <-----        <---------AHL20(1)                                                                   <-------    <---------AHL20(2)                                                                      ---------   --------->AHL20(2)                                                                     --------->ATHB51 --------AHL20(1)                                                                         <--------HAHB4 ------->ARR11(3)                                                    --------->ARR14(1)   --------->YAB1 --------ARR11(3)<---------AHL20(2)                                --------->ATHB12       <---------ICU4 ---->GT1<---------AHL20(2)   ----------->GT1                     <---------YAB1          --------->ATHB12 ->YAB1--------->AHL20(2)   ---------->DOF2                     --------->YAB1           --------->AHL20(2) ------->ICU4--------->AHL20(2)----------->GT1                 --------->ICU4            --------->ICU4 ------->AHL20(1)--------->AHL20(2)        --------->YAB1 ----------->GT1     <---------MYB52(1)   aaatattaaatatatttatttatttgtatagaaagttaaaaacaatagaaatagagggagtagtatttatgattcgctccgtttttatcgaataattagt  12503100                                                                             <-----------GT1                         <---------ARR11(3)                               <---------AHL20(2)                         --------->ARR11(3)                             <---------YAB1              <                         <---------GLK1(2)                            <---------ICU4       <-------TEIL ----YAB1          --------->ARR11(3)                                --------->ICU4     <---------At4g35610 --ICU4        <------ZmHOX2a(1)          ----------->GT1            <---------YAB1     --------->At4g35610 >ICU4        <---------YAB1 <-----------GT1   ---------->DOF2    <---------YAB1      <-----------RAV1(2)   attgctatttagaattaggattatctagatttttcaaactgaaatggataaaagaattcaagtacaatctgattattattttcaaatcccagatgcactc  12503200                              ----------->GT1                         --------->ATHB51                   <---------CCA1(1)                        <---------YAB1                      <---------RVE1(1)                      <---------ICU4                       <---------GLK1(2)                      --------->YAB1                       <---------ARR11(3)                     <---------YAB1            <---------TOE2(3)                  <---------YAB1    --------->ARR11(3)     --------->ARR11(3)         <---------TOE2(3)    <---------ANAC46 ----------->GT1                        <---------ICU4 ---------ETT(2)  <---------AHL20(2)<---------ARR11(3)   ----------->ARR10           --------->ICU4   tttcgacaattaagtttttttttattattattgtgtaaaatctaaaattaagttaaacgaagattttttaaaattctctcgtagttcataatggagacgc  12503300                                                   <---------AHL20(2)                                                   --------->AHL20(2)                                               --------->AHL20(2)               XXXXXXXXXXXXXXXXXXX>MIR156A-F                                  --------->ARR11(3)        ---------->DOF2     XXXXXXXXXXXXXXXXXXX>MIR157D               <----------DOF2    <---------ARR11(3)---------->DOF2       --------->YAB1      <------------CBF       ------------>CBF  <---------AHL20(1)       <---------WOX13(1)    <---------YAB1          --------->YAB1     --------->AHL20(1)      <------------CBF  <---------AHL20(2)        <-----------GT1    <---------AHL20(2)    <---------YAB1 *TSS           >>  --------->AHL20(2)     <---------ICU4  ----------->GT1<----------ID1--------->ATHB12          >>>>>   tcatttaaaattgtcaactttgacgactaattacaatatctaagagtaattaattaaagagaaaaagagtcttcattgataacagaagagagagagaaga  12503400                                      ------>NtERF2                                     --------->RAP2.6(2)                                     --------->ANAC46                              --------->At5g28300                            <---------ANAC46                 --------->YAB1      --------->ANAC58       --------->HSFC1(2)   <---------DREB2C(2)                                       <----------DOF2       <---------HSFC1(2)   <---------DEAR3(1)                                <---------ALFIN1  >>>>>>>>>TBF1  ----------->GT1     --------->ANAC58                       ------>ZmHOX2a(1) >>>>>>>TBF1    <<<<<<<<<ARR1 <------NtERF2                                --------->ANAC46 >>>>TBF1       <<<<<<<<<ARR2<---------MYB46(3)                       ------>ZmHOX2a(1)   agaagaagaagcttcacaatcgtaacaatggcggtgaagacgccatttctcaaacttctccctcttcttctccttctcctccacttccctttctcattct  12503500                         --------->ANAC58                         --------->ANAC46                         --------->ANAC58   <---------ARR14(2)                       <-----------GT1   --------->YAB1                    --------->MYB52(2)  <-----------------AGL1                 <-------GAMYB          ----------------->AGL2               <------NtERF2           ------>MYB83              ------>NtERF2   <---------LBD16             <---------ARR14(2)        -------->P             --------->ARR14(2)   --------->ARR14(2)            <---------At4g35610   <---------ARR14(2)            <---------ZAT2   ------>NtERF2  --------->ARR14(2)     <----------DOF2            --------->At4g35610 --------->LBD16      --------->At4g35610            --------->ZAT2  --------->DEAR3(1)       <---------At4g35610        <----------DOF2 --------->AtMYB61<---------MYB52(1)   ------>MYB46(1)             <---------DAG2             ------>ZmHOX2a(1)   ctaccatacctctcggctccgttatttacgcctccggttccaaccagaactggccatctcccaattccactttctccgtctcctttgttccatctccttc  12503600                    <---------CCA1(2)                   ------>NtERF2                  --------->RAP2.3(3)                  --------->RAP2.3(2)                  --------->DEAR3(1)                 --------->RAP2.3(1)                 <------NtERF2                 --------->ORA47(2)                                          ------>ZmHOX2a(2)                 --------->DEAR4(2)                                         <------ZmHOX2a(2)                 --------->ATERF1(1)                                        --------->GLK1(1)                ------>NtERF2                                               <---------GLK1(1)                <---------ATERF1(1)                                        <-----------ARR10                --------->ABI4(1)                              --------->WRKY12               --------->RAP2.3(2)                             --------->WRKY38(1)               --------->ANAC46                          --------->ARR14(2)--------->GLK1(2)               --------->RAP2.3(3)                       <---------ARR14(2)<---------ARR14(3)               --------->RRTF1(3)                       ============================HOX2a_HOX2a               --------->DEAR3(1)                       <------ZmHOX2a(1)  --------->ARR11(3)               <---------DEAR3(1)                       ===========================HOX2a_HOX2a              --------->RAP2.3(1)                   <---------At4g35610    <---------ARR14(2)              --------->DEAR4(2)                    <---------ZAT2         <---------ARR11(3)              --------->ERF1                      <---------WRKY38(1)      <---------AGP1        ----              --------->ATERF1(1)               <-----------HVH21          --------->ARR14(2)    ----             <---------ATERF1(1)           <---------ARR14(2)  --------->WRKY45                <-----            <---------DEAR3(1)             --------->ARR14(2) <---------MYB52(1)          <---------ALFIN1            --------->ANAC46        <---------ANAC58--------->ZAT2    <---------O2        --------->ANAC46           ------>ZmHOX2a(1)        <---------ANAC58--------->At4g35610   <------ZmHOX2a(1)  --------       ------>ZmHOX2a(1)<----------DOF2<-----------------AGL1 --------->DOF5.7(2)      <---------REM1(2)   ccctaactccttcctcgccgccgtctctttcgctggaagcgttccgatatggtcagcaggaaccgttgactcacgaggatctcttcgtcttcacacctcc  12503700                             <---------ALFIN1                            <---------MYB55(2)                            <---------ABI4(2)                          --------->ARR14(2)                          <---------ARR14(2)                       <---------HSFB2a(2)                       --------->HSFB2a(2)                       --------->ANAC46                      <---------LBD16                      <------NtERF2                     ------>NtERF2                    <---------ARR14(2)                    --------->ARR14(2)                                                     --------->At5g28300                 --------->MYB46(3)                                                       --------->LBD16                ------>MYB46(1)     --------->HSFB2a(2)                                   -----------                ------>MYB83--------->MYB46(3)                     <---------ANAC58   --------->CCA1(2)       <-----------HVH21--------->LBD16               ------>ZmHOX2a(2)              --------->ARR11(3) -->NtERF2     --------->MYB52(1)   <---------HSFB2a(2)            <---------ANAC58  --------->ARR14(2) ----->LBD16  --------->AtMYB61   ----------->RAV1(2)<------ZmHOX2a(2)               <---------ARR14(2) ----LBD16    --------->MYB46(3) <-----------HVH21  --------->ARR14(2)  --------->LBD16--------->MYB52(1) ->AtMYB61   --------->MYB46(3) --------->DEAR3(1)  <---------ARR14(2)<---------LBD16<---------ARR11(3)   ggctctctccgtctcaccaacggctccggaaccaccgtctgggactctaaaaccgatcgtctcggtgttacttccggttcgattgaagataccggtgaat  12503800                                                                                             --------                              <------MYB46(1)                                               ---------                              <------MYB83                                                  <--------                         --------->LBD16                                                    <--------                        --------->LBD16                                                   -----------                   <---------ANAC58                                                    <---------MYB52(1)                   <---------ANAC58                                                   <---------DEAR3(2)                  --------->HSFC1(2)                                                 <---------ATERF1(2)                  --------->HSFB2a(1)                                                --------->ATERF1(2)                  <---------HSFB2a(1)                                               <---------LBD16                  <---------HSFC1(2)                                               --------->ABI4(1)              ------->GAMYB<---------MYB52(1)         --------->ARR14(2)           ------>NtERF2           --------->MYB52(1)--------->MYB59          <---------ARR14(2)          --------->DEAR3(1)          --------->MYB46(3) <---------AtMYB61   --------->MYB52(1)              --------->MYB46(3)      ------>ZmHOX2a(1)<---------LBD16          ----------->HVH21               <---------At5g28300 -   ------>ZmHOX2a(1)<-----------HVH21--------------------->WRI1                <-----------GT1      < >GT1--------->TOE2(3)<-----------------AGL1 --------->GLK1(2)            <---------GLK1(2) ---------   tcatcctcctcaataaccgaagcgtcccggtttggtcttccttcgataatccgacggatacaatcgtccaatcgcagaatttcaccgccggtaagattct  12503900  Previous    Next  AGI:  At1g34300.1    Description:  lectin protein kinase family protein. similar to S-locus lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G19130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64613.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67775.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64615.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Curculin-like (mannose-binding) lectin; (InterPro:IPR00 Range:  from: 12503384    to: 12506026    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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