Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <---------ANAC58                                      <---------ANAC46                                      <---------ANAC58                                      --------->TGA1a                                      <---------TGA1a                                      --------->O2                                      <---------O2                                      ===================================================bZIP_DOF                                 <---------ANAC58                                 <------MYB46(1)                                 <---------ANAC58                                 <------MYB83                                <---------MYB46(3)                                --------->MYB59                              <---------MYB52(1)                            <-----------RAV1(1)                           ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                                   ---------->DOF2                         --------->ARR11(3)                                --------->ANAC58    <-----                         <---------ARR11(3)                           <---------ZAT2           <-----                         --------->ARR14(2)                           --------->ZAT2           <-----                         <---------ARR14(2)                          --------->ANAC58    --------->ZAT6                         --------->AGP1                        ------>ZmHOX2a(1)    <----------DOF2                         <---------AGP1       <---------MYB46(3)     --------->ANAC58--------->DOF5.7(2) ->DOF2                ----------->ARR10 <---------TOE1(2) <-----------GT1 --------->ANAC58<---------ZAT14   ataagtcaaatactggagttttaagtagatctgttgggtctcgtgtgttcgttcaaacatttatcctccccaagctccagcaaagactttaactgtagcg  12497600                                                    <---------RVE1(1)                                                    <---------CCA1(1)                                                 <---------TOE2(3)                                            --------->At4g35610                                        --------->ANAC58                                        --------->ANAC58            --------->HSFC1(1)                                      ---------->DOF2               <---------HSFB2a(2)                                     <---------GLK1(2)        --------------->AGL15                                     --------->ARR14(2)       <---------------AGL15                                   --------->ANAC46<---------ARR11(3)               --------->ICU4        <---------MYB59           <---------HSFB2a(2)       <<<<<<<<<TBF1     <---------TOE2(3)   <-- ----ANAC58               <---------At4g35610 <------ZmHOX2a(2)     --------->HSFB2a(2)     <-------- ----ANAC58               --------->At4g35610--------->ARR11(3)     <---------HSFC1(1)<---------TOE2(3) ----ANAC46         <---------ALFIN1 <---------ARR14(2) <-----------GT1    <---------WOX13(1)     <--   tttatcaagaccgaatcaaacaacactcggctgataccagaaacgcagatcaaggtattttcttcttcatctagaagattgatgtaatgaggtttcactt  12497700                 <-----------GT1                                                              -------                <---------AHL20(2)                                                          <--------       <---------ANAC58                                                                     ---------       <---------ANAC58      <---------ANAC58                      ------------>CBF      ---------->DOF2    <----------DOF2          <---------ANAC58                   <-------TEIL           <xxxxxxxxxxxxx -------ANAC58 <---------AHL20(2)                    --------->ANAC58               ----------->GT1 ---GT1<---------ANAC46 <----------DOF2              --------->ANAC58            <---------TOE1(1) -------ANAC58 --------->AHL20(2)    --------->YAB1  --------->ANAC46            <---------TOE2(1)   gcttctctttcttggaatttaatcttcttttacttgcattcagaaaaccttgtacaagccaagaggctcatcaatttgctcatacgaggtttaaagctga  12497800                                                                                       <---------ANAC58      <-----------GT1                                                                  <---------ANAC46  --------->AHL20(1)                                                                   <---------ANAC55(2)  --------->AHL20(2)                                                            <-------GAMYB  <---------AHL20(2)                                                           <---------MYB46(3) <---------ATHB51                                                        <---------MYB46(3) <---------AHL20(2)                                                     <---------YAB1 <---------ANAC58 --------->AHL20(2)                                        <---------ZAT18    <---------TOE2(3) <---------ATHB12                                   <------MYB46(1)     <---------TOE2(3)           < ---->HVH21                                         <------MYB83    <------------CBF   --------->ANAC55(2) -At4g35610                            <---------At4g35610 --------->ZAT18  <---------MYB46(3)  ----- >At4g35610                           ----------->ARR10   xxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)  <------ xxxsmallRNA(i)     <---------YAB1  <------ZmHOX2a(1)   <---------MYB46(3)<-------GAMYB<---------ANAC55(1)   caaataatttacagagcaacttatgaaaaactgatagaggaagatgctcaaatttggtttgttcgctatgtattgtggttgtggttaatgcgtgtttgac  12497900                                                        ---------->DOF2    ------------>CBF                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   --------->ANAC58                                <---------ZAT18                    <---------ETT(2)   --------->AtLEC2                              --------->At4g35610                  --------->ETT(2)   --------->ANAC58                              --------->ZAT2          <---------At4g35610   --------->ANAC46                              <---------ZAT2    --------->DAG2   --------->MYB52(1) ---------REM1(2)                       --------->MYB52(1)        ---------->DOF2 <---------MYB52(2) ---->ZAT6<---------TOE1(3)      ----------->GT1 <---------At4g35610<---------TOE2(3) >>>>>>>>>>AtTINY2 -----GT1 <---------TOE2(3)   <----------DOF2  xxxxxxxxxxxxxxxx>smallRNA(i)       --------->MYB46(3)   tctacatgcaataaggtttgactaaatccaggctttggtaacttacagagcagctcacaaaagactgataaaggaagatgatcaactatcgacatatagt  12498000                       <--------P  --------->WRKY38(1)                       <---------WOX13(1)                ---------->DOF2                      <-------GAMYB--------->WRKY12 <------NtERF2                     <---------MYB46(3)     <<<<<<<<<<AGL24                    <---------AtMYB61       <<<<<<<<<<AGL22       <-------TEIL                      <                    <---------TOE2(3)       <<<<<<<<<<AGL20  <-----------RAV1(2)                <----                  <---------MYB46(3)    ----------------->AGL3   <--------P                     <----              --------->ICU4     <-------GAMYB     --------->RAP2.6(2)             <---------------AtSPL3              <---------YAB1  <---------LBD16    <---------At4g35610               <---------------AtSPL8          <-----------HVH21   <---------At5g28300--------->At4g35610  ------>ZmHOX2a(2)         =====   tttttgtctatgtgtcatggttgtggttgattcacggttgactccatatttagcggcaatagagcaggttgatcccatagtcaaaatagtactgccaatt  12498100             <-----------RAV1(2)                               <------MYB46(1)           -------->ZAP1                                       ----------->GT1        ----------->HVH21                                      <------MYB83        --------->WRKY45                                      --------->MYB111(1)        --------->WRKY38(1)                                   <---------------AtSPL8     <---------ICU4        --------->WRKY12                                      <---------MYB46(3)         --------->ATHB12      <----------DOF2                                <---------YAB1                     <---------YAB1 ---------SPL7            <-----------GT1     -------->P      <---------AtMYB61         --------->ICU4 -------RAV1(1)   <------ZmHOX2a(1)         --------->MYB46(3)--------->MYB46(2)      --------->YAB1 -----MYB46(3)--------->LBD16   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              ----------->GT1 ========================RAV    <--------P <---------KAN4(2)  --------->MYB59  <---------ANAC46   gttggacgctttgacccagaggaatttgtaacgagttggcaagggaacaacccttgtgaatggtttggtacaaactgtttggagggtatcatcattggta  12498200                                                                                     <------------MYB.PH3(1)                                                             <---------LBD16         --------->DEAR3(2)                                                  ------>ZmHOX2a(2)                --------->MYB52(1)                                                 <------ZmHOX2a(2)                 <---------ARR14(2)                                                --------->ARR11(3)         <----------DOF2        ---                                                <---------ARR14(2)        ------>ZmHOX2a(2)      <---                                                <---------AGP1           <------ZmHOX2a(2)    -------                                                <-----------ARR10       <---------AGP1  ------>MYB83                                                --------->AGP1          <---------ARR11(3)    -------          <---------ANAC58                      --------->ARR14(2)      --------->AGP1------->GAMYB          <---------ANAC58                     <---------CCA1(2) <-----------HVH21 --------->ARR14(2)   <---------AHL20(2)            <-----------GT1<---------ARR11(3)      --------->ARR11(3)    <------ <----------DOF2      --------->YAB1<---------ALFIN1<-----------GT1    <---------CCA1(2)------>MYB46(1)   tctcttttatttccttgaacttaatcggaactatttctccacattttgcagatctaacctctcttcgggtcatagatctttcgcataaccgacttaaatg  12498300                                                                                         <------ZmHOX2a(1)                               <---------MYB59              ------>MYB46(1)       <-----------HVH21                              ----------->RAV1(2)           ------>MYB83         <<<<<<<<CAMTA3      <----------DOF2        ------->TEIL                 ------->GAMYB         ------->MYC3 ---->TEIL                   --------->GLK1(2)           --------->MYB46(3)     <-------MYC3 --------GT1                <---------ARR14(2)         <-----------GT1         --------->ANAC46 -------->AtSPL3            --------->ARR11(3)--------->HSFC1(2)               --------->ANAC58 -------->AtSPL8            --------->ARR14(2)<---------HSFC1(2)               --------->ANAC58<----- ---------AtSPL8  ---------->DOF2  <---------YAB1 <---------ANAC46           <---------ALFIN1--------   taccattccttttgaaatcacaaagttgaagaacctgactattgtggatgtttcttataaccaacttcatggggaagtcccacgcgttagaggaattgtt  12498400                                                                                  <---------------AtSPL3                                                                                  --------------->AtSPL8                                  ------>MYB83                                    --------------->AtSPL3                                  ------>MYB46(1)                                 <---------------AtSPL8                               ----------->RAV1(2)       --------->ANAC58  ------>MYB46(1)                              -------->P                 --------->ANAC58  ------>MYB83       ---------->DOF2      <---------WRKY12             --------->ANAC46 --------->MYB52(1) ----YAB1                   <---------WRKY38(1)      ----------->RAV1(1)--------->MYB46(3) --->GT1           <---------ATHB12                  ------>NtERF2  --------->MYB46(3)   atactcactgaaaggaatccaaacatcgagtcaacctgccttcttgttccttcgccaacaaggaacaagaacaaaccaactgttttggtacttctacttg  12498500  Previous    Next  AGI:  At1g34290.1    Description:  leucine-rich repeat family protein. similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G24650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38725.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 12497978    to: 12498778    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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