Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <-------TEIL              --------->CCA1(2)             --------->ZAT14                               <---------GLK1(2)           <------ZmHOX2a(2)             <---------ZAT14                               <---------ARR14(2)         --------->AGP1             <---------ZAT18                               --------->ARR14(2)         <---------ARR14(2)      <---------ALFIN1         ---------->DOF2      --------->At4g35610               --------->ARR14(2)  <---------ZAT2           ---------->DOF2     --------->REM1(1)     <-----------GT1  --------->ARR11(3)  --------->ZAT2--------->ANAC46          --------->ZAT6  --------->At4g35610         <---------ARR11(3) --------->ANAC58    --------->ANAC46 --------->ANAC58<-----------TGA1            ---------->DOF2 --------->ANAC58  --------->MYB52(1) --------->ANAC58<-----------HVH21   <----------DOF2   tccaagctccatctctgcacttaacgtcgcaaagaaaggcacgaagactacatcagcgtcagattcactaaaaacccttttagcaaaagatccaattcgt  12494100                                                                               <------MYB46(1)                                                                              --------->MYB55(2)                                                                              <---------MYB46(3)                                                                             <---------MYB55(1)                                                         --------->MYB52(1)  --------->ALFIN1                                                   <---------WOX13(1)        <---------ANAC46                                       --------->ZAT14  <---------WRKY38(1) <---------MYB52(1)                                       <---------ZAT14  <---------WRKY12  <---------DEAR3(1)                                  --------->ZAT14 <---------ANAC46       --------->SPL7                             ------>ZmHOX2a(2)    <---------ANAC58       <-------TEIL                         <---------ATHB12   --------->ZAT14            <---------SPL7              --------->HSFB2a(2) <---------ZAT14 <---------ANAC58 <---------LBD16        <---------ANAC46       <---------AtMYB61<---------TOE1(2)   <---------ZAT14   <---------GLK1(2)<------MYB83   ttctctggtgaggtttctaggtctcccatgatccagtactcagcactgtattgcttgatcaacgggttctctgggtacggtgggtatttatcgggtgaat  12494200              ----------->HVH21            <-------GAMYB               <---------ARR14(2)           <---------MYB46(3)           ------->TEIL          <-----------RAV1(2)           --------->GLK1(2)                                          --          <---------ANAC46              --------->ARR14(2)                                         <-        <-----------HVH21          --------->ANAC55(2)                                             <-     --------->ANAC55(2)        --------->ARR14(2)                                          ------>ZmHOX2a(2)     <---------ANAC58           <---------ARR14(2)                                         <------ZmHOX2a(2)     <---------ANAC58        <---------ANAC46 <---------ANAC46                            <---------ARR14(2)    <---------LBD16   <-----------HVH21<---------CCA1(2)                                  --------->ARR11(3)   <-----------GT1------>ZmHOX2a(2)<---------ANAC55(2)                                    <---------ARR11(3) <----------DOF2--------->ARR11(3) --------->ANAC46     <------ZmHOX2a(1)                 --------->ARR14(2)   gggttttacgggtcgggtgatctgggtcactgggtatacgtgaatctggagtagaagaggaccagtatttgtcgataagaccatagtttagggatcttgg  12494300                                        ----------->GT1       <-------TEIL                     <---------ANAC58    <---------ZAT2                      <---------ANAC46    --------->At4g35610                 <---------ANAC58    --------->ZAT2                    <---------ANAC46                               >>>>>>>>>TBF1    <---------At4g35610             <---------ZAT14                    <---------TOE1(3) ------->At4g35610       <---------MYB52(1)       <---------LBD16      <---------TOE2(3) --------ZAT2       <-----------GT1 --------->ZAT14   --------->ARR14(2)     ------------------------ --------At4g35610--------->YAB1   --------->ALFIN1   <---------ARR14(2) <------ZmHOX2a(1)         --   aagctcagctacatagacattgataccgttttggagagtgttgtgtgaaatgctcggatttggattggagattaaggaattggagaagaagaagagaaga  12494400                                                                                     --------->HSFB2a(1)                                                                                     --------->MYB46(3)                                                                                     --------->HSFC1(2)                                                                                     <---------HSFB2a(1)                                                                             ------>ZmHOX2a(2)                                                                            <------ZmHOX2a(2)                                                                           --------->ARR11(3)                                                               ------>NtERF2=============HOX2a_HOX2a                                                              --------->ANAC46       <---------HSFC1(2)                                                              --------->ANAC58    <------ZmHOX2a(1) <----------ID1           <------ZmHOX2a(1)                   --------->ANAC58  <---------TOE1(2) >ANAC81   <------ZmHOX2a(1)   --------->CCA1(2)       <---------HSFB2a(2) <---------ARR11(3)       < ------->CCA1(2)  ---------->DOF2                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <   gagacgacgaagaggagagagaaagagaggaagatagaaggaattgaacagagaggtctagtagacgccattgatgcgatcttaggaaccatcttcgatt  12494500               ------>ZmHOX2a(2)               ==========================HOX2a_HOX2a              ===========================HOX2a_HOX2a              <------ZmHOX2a(2)              <---------GLK1(1)              --------->GLK1(1)             <-----------ARR10             --------->ARR11(3)                                                                   ---             <---------ARR11(3)                                                               <------             <---------AGP1                                                                   -------         ---------->DOF2                                                             --------->ANAC58        ==============HOX2a_HOX2a                                                    <---------ALFIN1        <------ZmHOX2a(1)                                                            --------->ANAC58        =============HOX2a_HOX2a                            <---------ARR14(2)     --------->ANAC58<-       --------->ANAC58                                     --------->ARR14(2)     <---------ALFIN1--       --------->ANAC58                                     ------->TEIL     --------->At4g35610  <--      <---------TOE2(2)           <------ZmHOX2a(1)      <---------YAB1   <---------At4g35610 <------      <---------TOE1(2)   <---------ANAC58            --------->ICU4<---------At4g35610       ------- ---------ANAC58      *TSS<---------ANAC58       --------->YAB1     --------->At4g35610--------->ANAC46 ---------ANAC58     <----------DOF2           <------------CBF ------>ZmHOX2a(1)  --------->ANAC58<-   ttgcttcgcaggaaagatctctgcttttgcttcacaggacagaatgggttattgtaactatgaatcctctagctgaagcagaggcacacacactatttta  12494600                         <---------AHL20(2)          --------->ANAC46 <---------YAB1   <---------AHL20(2)   --------->AHL20(1)   --------->AHL20(2)   <---------AHL20(2)  --------->AHL20(2)    --------->AHL20(2) ------>AHL20(2)        <---------AHL20(1)                          <---------AHL20(2) ---AHL20(1)         --------->AHL20(1)                             --------->AHL20(2)              < -->AHL20(1)         <---------AHL20(2)                          --------->ATHB12           <-------- --------AHL20(2)    --------->AHL20(2)                         <---------ATHB12            --------- ------->AHL20(2)   <---------AHL20(2)                          <---------YAB1           <---------ICU4 -------AHL20(2)    --------->AHL20(2)                          --------->ICU4          <---------AHL20(2) ---AHL20(2)    <---------AHL20(2)                            --------->YAB1            --------->ICU4 -->AHL20(2)    --------->AHL20(2)                     <---------ZAT6     <---------YAB1--------->AHL20(2) --------AHL20(1)--------->AHL20(2)              <---------------AtSPL3<---------YAB1   <---------ATHB51   ttaaatttataaacgaaaataaataatttattagtagtttctctaaatttgttagtactgctagtaatgatttattattagtctttctaaataattaaaa  12494700                               --------->YAB1                            ------>MYB83                            ------>MYB46(1)                --------->ARR11(3)                            ------->GAMYB     ----------->GT1   <-----------GT1             --------->AHL20(2)                       --------- ---------YAB1  <---------AHL20(1)                 <---------AHL20(2)                      <---------ATHB12 -AHL20(2)      --------->AHL20(1)          --------->YAB1  <---------At4g35610  <---------DAG2 >AHL20(2)     <---------AHL20(2)          <---------YAB1   --------->At4g35610  <----------DOF2   atatgaaaggtttctaaatattttgtcaccaaataatagaaaattatcaaaatttaaatttcaactgaaatttgttactaaaacttttttgaaatcataa  12494800                                                     <----------DOF2                                -                                                     <---------DAG2                           <------                        <---------AHL20(2)     --------->ZAT6                                <-------                 <---------ICU4                <-----------GT1                              <--------             --------->AHL20(2)                <---------ICU4                              --------->YAB1             <---------AHL20(2)             <---------ICU4                           <---------ARR11(3)            --------->AHL20(2)              --------->YAB1          <---------YAB1   --------->ARR11(3)          <----------DOF2                  <---------AHL20(2)  <--------HAHB4     --------->AHL20(2)<   <-----------GT1  <---------AHL20(2) --------->AHL20(2)      <---------ICU4     <---------AHL20(2)- >YAB1------->GAMYB<---------YAB1      <---------AHL20(2)     <---------ATHB12   --------->YAB1     <   actaataacacccttttaatttttatttaaaactttctaatataaataatcactactttttcccatcattttcatttagcctattaaaatcttttatcat  12494900      --------->TOE2(3) --------->LBD16 -------->HSFC1(1) ---ICU4 --YAB1          --------->TOE2(3) ---GT1   --------->At4g35610                               --------->ANAC58                       -- ---------HSFC1(1)             <<<<<<<ZML2                  --------->ANAC58                       -- -------->HSFB2a(2)      <---------ARR14(2)          --------->WOX13(1)               ----------->HVH21 ---------HSFB2a(2)  --------->At4g35610         <---------ZAT6               xxxxxxxxxxxxxxxx>smallRNA(s)   ttccagaacattagcagaacattagcagaactagaacatatagacctagtagagtcaatctcaagaaatgaagaaatattcgtccatcgtgaccccaaac  12495000  Previous    Next  AGI:  At1g34270.1    Description:  exostosin family protein. similar to ARAD1 (ARABINAN DEFICIENT 1), catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G35100.1); similar to OSJNBa0043A12.35 [Oryza sativa (japonica cultivar-group)] (GB:CAE02830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64632.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) Range:  from: 12492389    to: 12494522    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version