Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <x                                                                                                  <<<                                                                   --------->ALFIN1             <xxxx                                                                  --------->LBD16              <<<<<<                                                                 <---------ANAC58            <xxxxxxx           <XXXXXXXXXXXXXXXXXXXXXXXMIR163                        <---------ANAC55(1)      ------>ZmHOX2a(2)       <-----------HVH21                                         <---------ANAC58        <------ZmHOX2a(2)   --------->GLK1(2)                                         <---------ANAC58           <---------ARR14(2)  --------->GLK1(1)                                          <---------ANAC58           --------->ARR14(2)  <---------GLK1(1)                                     <----------DOF2                 <---------ARR11(3) ------>DOF2                                          ------>ZmHOX2a(1)                 --------->ARR11(3) --->RAV1(1)                                   <---------ARR11(3)<---------ANAC46      ------->GAMYB   aaagaaatctgtcaaatgttctaagttttcttcaacctcttaaactcaatttcttcctcttttgcttccgtggtgagtcattctctcaacgatcttcttc  12485500       <<<<<<<<<TBF1           <----------DOF2     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <<<<<<<<<TBF1  <<<<<<<<<TBF1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------MYB52(1) <<<<<<<<<TBF1  <<<<<<<<<TBF1 <---------ANAC58                --------->ICU4 xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->LBD16         <---------YAB1 <<<<<<TBF1  <<<<<<<<<TBF1 ---------->ID1                   --------->YAB1 xxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <---------LBD16      --------->LBD16 <<<TBF1  <<<<<<<<<TBF1  <-----------RAV1(1)           <---------LBD16      --------->WRKY12 xxxxxxxxxxxxxxxxsmallRNA(se3)<---------ANAC58  <-----------GT1           <-------GAMYB   ttcttcttcttcttcttcttcttcttcttgttgctttctccggtgatttttttcttctccggtgataatcgattttcgttgaactgaaattttgaaaatc  12485600                                                                        --------->ZAT14                                                                        <---------ZAT14                                                                     --------->SPL7                                                                   <---------SPL7                   <                                                                  <---------ANAC46                  -                                                                  <---------ANAC58             <-----                                                                  <---------ANAC58   ----------->HVH21    <---------YAB1                          ---------->ID1 <------------CBF          --------->ETT(2)  <-----------GT1               <---------MYB46(3)        --------->ATHB12        <---------MYB46(3)-   gattttactattcgacttgacttcgagtcttcgattgttgattttcgtcgtctctgttcttcattgtttcgtactgtagtagagttgttgacagagattc  12485700                                <---------GLK1(2)                               <------NtERF2                              --------->LBD16                     <---------ARR14(2)                     --------->ARR14(2)                                       <---------RVE1(1)                     <---------AGP1                                        <---------ETT(2)                     <---------ARR11(3)                                    --------->ETT(2)                     --------->ARR11(3)                                  <-------GAMYB            ---                     --------->AGP1                                     <---------DEAR3(2)        <--         --------->TOE2(3)   --------->LBD16                            <---------MYB46(3)       <---        --------->YAB1<------ZmHOX2a(2)                                <---------DEAR3(1)  ------>ZmHOX2a(1)      --------->ARR14(2)    <---------LBD16   <---------AHL20(2)      <---------MYB52(1)  --------->TOE2(3) ---------ARR14(2)   <-----------ARR10     --------->ARR14(2)        <-----------HVH21 <-----------GT1 -------->ARR14(2)  <---------CCA1(2)      <---------ARR14(2)  <-----------ARR10  <---------AHL20(2) --TEIL ----------->GT1------>ZmHOX2a(2)<---------ANAC58       --------->ARR14(2) --------->AHL20(2) -------->GLK1(2)  ----------->ARR10    <---------ANAC58      <---------CCA1(2)   <---------AHL20(1)   aaaatccgaatcgtaaattcttagatcttcgccggaatttgtgcgtatttgattttggcatatcaaatctccgtcggtcgatattttattttccttattt  12485800                                      --------->YAB1                                     --------->ICU4                                     <---------YAB1                                   --------->YAB1                                  <---------YAB1                                  --------->ICU4                               <---------YAB1                               --------->ICU4                            --------->ICU4                          -------->HAHB4                         --------->ICU4                <--------P--------->YAB1             <---------YAB1              <------MYB46(1)--------->YAB1        --------->YAB1              <------MYB83<---------ICU4    --------->ATHB12                                    <----             --------->MYB59<---------YAB1 --------->ICU4                                  --------->REM1(1)         --------->ATHB12<---------ATHB12  <---------YAB1                              <------NtERF2        <---------YAB1  <---------TOE2(3)--------->YAB1                               <---------MYB46(3) ------>HSFB2a(2)     <---------AHL20(2)<---------YAB1 <---------ANAC58            --------->ZAT2 -------HSFB2a(2)    --------->AHL20(2) --------->ICU4 <---------ANAC58          <-----------RAV1(2) ------LBD16 --------->MYB111(1)--------->YAB1    <---------YAB1     <----------DOF2 --------->ALFIN1   ctggatttttatgatttggtagatttaatgatgatgatgatgatgatgatttatgatgcttaacgcgttttctttggttttaaacaggtggctacttctc  12485900                                                                        <---------DOF5.7(2)                                                                       --------->ZAT14                                        --------->YAB1                 <---------ZAT18                      <---------ZAT6 <------------CBF                  <---------WRKY38(1)               ------->TEIL    <---------ARR14(2)                      <---------ZAT14             <---------ZAT18   --------->GLK1(2)          --------------->AGL15          ------>ZmHOX2a(1)    --------->ARR14(2)         <---------------AGL15          <---------ANAC46     <-----------ARR10          <----------DOF2 -----ANAC46 <---------ETT(2) <---------GLK1(2)  ------>ZmHOX2a(1)    ----------->HVH21       <------   gtgttcttggtcctgtggaccttggtgttacagaatctccattgatgactccttctaattctttatctagcagtgaacgctctctctctggtatagattt  12486000                                                                       --------->ZAT14                                                                       --------->ZAT18                                                                       <---------ZAT14                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                --------->ZAT2                                                                <---------ZAT2                                                                <---------At4g35610                                  --------->AHL20(2)            --------->At4g35610               <--                         <---------ARR14(2)                     <------MYB46(1)                   <--                         --------->ARR14(2)                     <------MYB83<-------GAMYB         <--          <-------GAMYB--------->LBD16 --------->ATHB12       <-----------RAV1(2)            --------       <---------At4g35610    ----------->GT1                 =========================RAV   <------- ---GLK1(1)      <---------ATHB12 <---------AHL20(2)  <---------AHL20(2)   <-----------RAV1(1)   ----   cttctcttgtgctgttgaaatcatccgaaaacgcgtttaaatgatttggatgatgttttatttggcaggtgagtgttctgttgatggaaactcttgtgat  12486100      --------->ARR11(3)      <---------ARR11(3)     <XXXXXXXXXXXXXXXXXXXXMIR863-5P ----MYB83 ----MYB46(1)                         <---------YAB1 -------ANAC55(2)                --------->YAB1                   <---------YAB1       <---------ANAC46 --->HVH21                  <---------AHL20(2)              --------->ICU4          <<<<<<<<<MYB98 --YAB1<------ZmHOX2a(2)<----------DOF2                     <---------YAB1      <----------DOF2 ----->MYB59    <---------ICU4  ----------->GT1    <---------MYB52(1)         <---------YAB1        <   aggtaagagatcaacaaaacatgactcttttatattgataatttttgtaaacagtttgtttgatgatgaagattgttgttatctttgttaggggtattga  12486200                                                              <---------MYB46(3)                                                             ------>ZmHOX2a(2)                                                           <---------AGP1                                                           <---------ARR14(2)                                                        <--------P                                                     <---------TOE2(3)          --------->ANAC46                    ======================HOX2a_HOX2a          --------->ANAC58                    <------ZmHOX2a(1)<-----------HVH21          --------->ANAC58              <---------TOE2(3)  --------->ARR14(2)                  ------   ------->TEIL                        --------->MYB52(1)<-------TEIL                     ------>NtERF2 ---------YAB1               --------->ARR11(3)      <---------TOE1(3)   --------->SPL7  <---------ANAC46   agatgaatgttcaagtcatagtagtcaagaagatgtggaattaacgaaggaggttaaggtagatcggttagagcgtaagtcgaagagcatgccgagtgat  12486300                                               --------->ZAT14                                               <---------ZAT18                                               <---------ZAT14                                               --------->ZAT18                                           --------->GLK1(2)           <---------YAB1               <                                    <---------ZAT14                 --------->ICU4                 --  --------->ETT(2)                 --------->ALFIN1        ----------->HVH21           -------------- <---------HSFB2a(2)    ---------->DOF2    <---------KAN4(2)   ------>ZmHOX2a(2)--------->ICU4    <-- --->ARR11(3)      --------->GLK1(1)--------->ZAT14      <---------At4g35610  --------->YAB1     ----   attctcgacattttggatgagaaatcgaaagaaaacagtgttgagaatgtgcagtttttatctgatcgtgaagatgatagtgatgatgttccagtttggg  12486400  Previous    Next  AGI:  At1g34260.1    Description:  phosphatidylinositol-4-phosphate 5-kinase family protein. similar to 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G33240.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G33240.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO64634.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65296.1); similar to Phosphatidylinositol-4-phosphate 5-Kinase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96911.2); contains InterPro domain Phosphatidylinositol-4-phosphate 5-kinase, core; (InterPro:IPR002498) Range:  from: 12485945    to: 12492147    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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