Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               ---------->DOF2                                                                ---------           --------->ANAC58                                                               <----------           --------->ANAC58                                                             <----------DOF2       >>>>>>>>>>DREB1A                                                         <---------AHL20(2)       >>>>>>>>>>DREB2A                       <---------WOX13(1)               <---------AHL20(2)      <---------ETT(1)                       <---------ANAC58                  --------->AHL20(2)   <-----------GT1                           <---------ANAC58                  --------->AHL20(1) --->ANAC55(2)              <---------DAG2  --------->ATHB12                   <---------AHL20(1)---- ----ANAC55(2)              <----------DOF2<---------YAB1                     --------->AHL20(2) <---   taatattaccgacaagaaagaacattactcctttttctattacatttgattgccattacaaaaacaaaaatcaagaacaaattaatttctctttacctat  12470000         --------->ALFIN1        <-------MYC3                              --------->ANAC46                                 <- --------->AHL20(2)               <---------AHL20(2)          --------->GLK1(2)                   <-- <---------AHL20(2)               --------->AHL20(2)     <---------AHL20(2)                       --- >ANAC55(2) <---------PCF2        --------->AHL20(1)    --------->AHL20(2)                     ------ -GT1   ------->MYC3              <---------AHL20(1)  --------->TOE2(3)                       ------- ----->AHL20(2)        ---------->DOF2       <---------YAB1 <---------AHL20(2)                <------ ------AHL20(2)      <---------YAB1    <-------TEIL----------->RAV1(1)                    --------->CCA1(2)   taattaaacatgtgggtcatattatgaaagacttaataaaatacattactatacaacattaaataatctatctaaaacaaatatttgacaagataagata  12470100                                                                --------->YAB1         <---------AHL20(2)                                     --------->TOE2(3)            -------- --------AHL20(2)                                               ----------->GT1         <xxxxxxxxxxxx -------AHL20(1)                      <---------AHL20(2)        --------->TOE1(3)      <---------REM1(1) ------>AHL20(1)                      --------->AHL20(2)      ------->TEIL             ----------->GT1 --->CCA1(2)                         <---------AHL20(2)      <---------CCA1(2)      <-----------RAV1(1) -->ARR11(3)                   --------->ANAC55(2)    --------->AHL20(2)          <xxxxxxxxxxxxxxxxxx ---ARR11(3)<-----------GT1    <---------ANAC55(2)    <---------AHL20(2)--------->AHL20(2)<xxxxxxxxxx   tatatttgtatttttttctacttcaatagcatcacttattttaaatataagcttatataatttgaatcttaaaaaaaaatcaacttgtgttgtaacatag  12470200                                                --------->ANAC46                                                --------->ANAC58                                                --------->ANAC58                                             ----------->RAV1(1)                                             ------>MYB46(1)                                             --------->MYB52(1)                                             ------>MYB83                                             -------->P                                            --------->ANAC46                                           ------->GAMYB                                           <---------MYB55(2)                                           --------->MYB46(3)             --------->YAB1                                         --------->ANAC58                 --------->ATHB12        <--                                         --------->ANAC58              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   --------->GLK1(2)                     --------->ANAC46        <---------YAB1                  ---- --------->ICU4 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)        --------->ARR11(3)                 ------ ->TOE2(2)     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           <---------ARR11(3)           <---------YAB1 xxxxxxxxxxsmallRNA(i2)              --------->YAB1         --------->AHL20(1)         <-----------GT1 xxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      <---------AHL20(1) <----------ID1  ------ xxxxxxxxxxxxxsmallRNA(i2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)   gtcataatctattactgatttagtagaatatcaacacaattacaacccaccagcaagtagaatatttttcatagaatcatagggacatattacaatacat  12470300                                                      <------MYB46(1)                                                <---------TOE2(2)                                                <---------TOE1(2)                                             xxxxxxxxxxxxxxxx>smallRNA(i)                                           <-----------HVH21                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                         xxxxxxxxxxxxxxxx>smallRNA(i)             <---------ATHB12                                       xxxxxxxxxxxxxxxx>smallRNA(i)         --------->ANAC58            --------->ANAC58          ------>ZmHOX2a(1)       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) -------AHL20(2)                     <---------MYB59  <------MYB83          --------->ANAC58    *TSS< ----->AHL20(2)                 --------->HSFC1(2)   --------->MYB59    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------->AGL15   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <---------HSFB2a(2)   xxxxxxxxxxxxxxxxxxxxx --->TOE2(3)--------->ANAC58    <---------HSFC1(2)   <---------AtMYB61--------->ZAT14     <xxxxxxxxxx   taaatagataacataagcatgttttgaactaagaaacatcctaactatcacaggtttggtctagagaacaagtgaagtaagccaaagattagattaagag  12470400                                                                             ------>ZmHOX2a(2)                             ----------->GT1                               --------->ARR11(3)                         <---------At4g35610                    ----------->HVH21              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <xxxxxxxxxxxxxxxxsmallRNA(i)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <---------ZAT18         --------->At4g35610    <---------WRKY18(1)   ------->TEIL                <-- --------->ZAT18         --------->ZAT2    --------->ARR11(3) <---------At4g35610              ------ xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <------ZmHOX2a(2) xx>smallRNA(fl3)   ---------->DOF2        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    --------->ARR11(3) xxxxxxxxxxxxxsmallRNA(i2)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)----------->TGA1   <---------ARR11(3)   ttgtccaccaattgaagaatgggaaagagctgagttaattcatgagttcttgacccatttgtagagatgacgaatttgatctctagatcatcttatccaa  12470500                                                                                       <---------ANAC46                                                                                     --------->MYB55(2)                                                                                     --------->MYB111(1)                                                                                     <---------MYB46(3)                                                                                    xxxxxxxxxxxxxxxxx                                                         --------->GLK1(2)          <--------P                                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    --------                                                   --------->AtLEC2    <---------ARR14(2)<------MYB46(1)                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<-------GAMYB                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)--------->MYB111(2)               --------->ANAC58               --------->ANAC58         --------->ARR14(2)<------MYB83               --------->AtLEC2               --------->ANAC46  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->ANAC58 <---------YAB1    xxxxxxxxxxxxxxxxxxxx        <-----------GT1                     ---------->DOF2    --------->ICU4    <---------YAB1     <---------AHL20(2)                 <-------GAMYB    --------->ARR14(2)    xxxxxxxxxxxxxxxxxxxxxx -------ARR11(3)                       <---------MYB46(3)<---------ARR14(2)    --------->YAB1-------- ----->RAV1(1) --------->ANAC58        ----------->GT1  <---------GLK1(2)     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   catctaatttatacttcatgcaagtatggcatattgaaatgtggttaaaagccatgaagaatctgatgatgaagttctgtatcatggttgttggtatgca  12470600                                                 --------->ZAT2                                                 <---------ZAT2                                        <-----------HVH21                                   <---------YAB1<---------At4g35610                                 <---------bZIP60(1)                                          <xxxxxx                                 --------->bZIP60(1)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                 <---------TGA2(1)           ------>ZmHOX2a(2)               <-------     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)        --------->At4g35610                         <-------    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <-----------GT1 xxxxxx>smallRNA(i2)             --------->GLK1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   xxxxxxxxxxx ->ANAC58                   ----------->GT1<xxxxxxxxxxxxxxxxsmallRNA(i)  --------->ARR11(3)  <------- xxx>smallRNA(i2)         <---------ZAT14<---------YAB1      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   x x>smallRNA(fl3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxx ->ANAC58          <---------ANAC46<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------ARR11(3)xxxxxxxxxx   agagaagtttgacaaatattggagtgaatacagtgatatcattgtcattgcagcagtgtttgatccaagattgaagttctctatgttacaatattgcttc  12470700                                                  <---------At4g35610                                          <---------ANAC58                                         <-------TEIL                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                       ------->MYC3                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                     <---------AHL20(2)<-------MYC3                  ----------->GT1      <-------MYC2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ------->MYC4 xxxxxxxxxxxxxxsmallRNA(fl3)xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) --ANAC58       <---------MYB52(1) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) --ANAC46 <---------ANAC58  <---------YAB1<---------ANAC58   <---------DAG2 xxxxxxxxxxxx>smallRNA(i2)  <---------TOE1(3)     --------->At4g35610 --ANAC58 <---------ANAC58  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  ------->MYC2          <----------DOF2    --------->GLK1(2) xxxxxxxxxxxsmallRNA(fl3)--------->AHL20(2)      --------->GLK1(2)         ---------->DOF2xxxxxxxxxxx xxxxxxxxxxxxx>smallRNA(i2) <---------TOE2(3)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)---------->DOF2--   gatacacttgatgcttccattagtaaatttaagattgaacatgtgcgtaagaagctgaagaagctttttgaagtttataaagaatccaaaggaaattgca  12470800                                                      <-----------GT1                                               <---------ANAC46                                               <---------REM1(1)                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                          --------->CCA1(2)                                         <---------ARR14(2)                                         --------->ARR14(2)                                         --------->ARR11(3)                                        <------ZmHOX2a(1)          ------->GAMYB                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                     --------->HSFB2a(2)        <-----------GT1                                     <---------HSFB2a(2)     <----------DOF2                                     --------->HSFC1(1)      --------->TOE2(3)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                < xxxxxxxxxxxx>smallRNA(fl3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                          <----- ------->YAB1 --------->TOE2(3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      --------->AHL20(2)  <------   attagaacttcaaaaaccatagtttgacaaaacattcttctaggatatggtgtaagtttccatctttaaccctctattaaaaactttctatgttttgatg  12470900  Previous    Next  AGI:  At1g34240.1    Description:  transposable element gene. hAT-like transposase family (hobo/Ac/Tam3), has a 5.6e-48 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana) Range:  from: 12470396    to: 12471230    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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