Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     ---------->DOF2               <---------------AGL15        --------->YAB1       --------->ARR11(3)                     <---------ICU4       <---------YAB1       --------->YAB1                 <---------AHL20(2)                   -----      --------->AHL20(2) ---------->DOF2                   --------->AHL20(2)                   <----   tcttcccttataatatgctcaacctagtaaagataaccaaagagtcaaacaatgttccaaattaaactaataaggccatggattaaaaaacaaacccgaa  12465600                                <----------DOF2                              --------->HSFC1(2)                                        --------->TOE2(3)                              <---------HSFC1(2)                                       --------->At4g35610                         <---------HSFB2a(2)                                      --------->ATHB12        <---------HSFC1(2)   --------->GLK1(2) --------->ANAC58                  ------>ZmHOX2a(1)        --------->HSFC1(2)   ----------->ARR10 --------->ANAC58                  <---------YAB1 ----- ---->ARR14(2)           --------->HSFB2a(2)--------->ANAC46     <------------------------ANAC81===== -----ARR14(2) <---------WRKY18(1)        <-----------GT1<---------AHL20(2)      ====================   ttcgagcagtagcttcttgaccagtctcgagaagctttgcaatttcacgacgcatttgtttaatctgtgcttctcttctattcctgattagcttaatcct  12465700                                                                  <---------HSFB2a(1)                                                                  --------->HSFC1(2)       <---------DOF5.7(2)                                        --------->HSFB2a(1)     --------->DOF5.7(2)                               --------->YAB1     <---------MYB52(1)                              <---------WOX13(1)   ---------->DOF2    --------->TOE2(3)                             --------->ICU4  <---------HSFC1(2)    --------->TOE1(3)                             <---------YAB1 <-----------ARR10            <------    ----------------------->TaNAC69(2)   --------->ANAC58        --------->GLK1(2)        <----------    <-------GAMYB                        --------->ANAC46        <---------ARR14(2)      <-----------   ------>ZmHOX2a(2)                     --------->ANAC58        --------->ARR14(2)    ----------->GT1   ----------->GT1                     --------->AtMYB61         <---------ARR11(3)   <---------WOX13(1) ->ZmHOX2a(1)                       <-----------GT1--------->ATHB12    --------->TOE2(3)--------->YAB1 =========HOX2a_HOX2a       <---------ANAC46----------->RAV1(1) <---------GLK1(2) --------->HSFB2a(2) =========HOX2a_HOX2a     <---------ANAC46 --------->ANAC46  --------->YAB1       <---------HSFB2a(2)   agggatcgttaacttgagcaaggttttgctgtgtataaaaaccacacaacacatgattgataatcagaatcttcgtcaaagtttctagattgataatttt  12465800     --------->YAB1                            <----------DOF2   <---------ARR11(3)                        <---------At4g35610                                 <--- ---ICU4                    <------ZmHOX2a(1)--------->At4g35610                         ------>ZmHOX2a(2) -----AGL15                ----------->GT1   <---------ZAT2                          --------->ICU4 ------AG   --------->CCA1(2)    <-----------GT1         <---------YAB1              <---------YAB1   ggcaaaatcataagagatgaaattcagagaggataataccattttgcagctttgaaacccttattgaagaaggaatcgagcatcgacatgatcgattttt  12465900                                                                          <---------ANAC58                                                                          <---------ANAC58                                                                     <---------ICU4                                                                     --------->ATHB12                                                                    <---------YAB1                                                                   <----------DOF2                                                                  ============================HOX2a_HOX2a                                                                  ------>ZmHOX2a(2)                                                                 <---------RVE1(1)                                        <----------DOF2          <------ZmHOX2a(2)                                      --------->HSFC1(2)         =============================HOX2a_HOX2a                                      <---------HSFC1(2)        --------->ARR11(3)                           <------ZmHOX2a(2)                    <---------ARR14(3)                          <---------ARR11(3)                    <---------ARR11(3)                 <---------YAB1      ----------->ARR10          --------->ARR14(3)               <---------ICU4    --------->HSFB2a(2)            --------->ARR14(2)       <---------RVE1(1)               --------->YAB1    <---------HSFB2a(2)            <---------ARR14(2)      --------->ARR11(3)      <---------YAB1      --------->ARR11(3)                ---------->DOF2             <---------ARR11(3) --------GT1  <---------YAB1    ------>ZmHOX2a(2)<---------------------WRI1   *TSS     <------ZmHOX2a(1)   tactggttacgatttgatgatcactgaagatcgatcgcgaagctttggaacagagaagattacaaagatctttattgcttctcaacgaaggattttttct  12466000                                                           <------MYB83                                                           <------MYB46(1)                                                         <---------WOX13(1)                       ---                                                        <------------CBF                          ---                                                       --------->ATHB12                           ---               <---------TOE2(3)                      <---------YAB1                              ---         <---------ANAC58                        <---------ANAC58                                 ---         <---------ANAC58                        <---------ANAC46                              ======         <---------ANAC46                        <---------ANAC58    <---------ATHB12          ------    <---------YAB1      <----------ID1          <-------TEIL     ------------>CBF <---------CCA1(2)   ctggttatgtttcgtttaagaaaaaaaaaacaaaatcggaagagaaacgatgcgttttgattggtttaccaataagtcaaatccaaatctcaagtgaagt  12466100                    <-------GAMYB                   <---------DEAR3(2)                   <---------MYB46(3)               <---------TGA1a               --------->TGA1a               --------->O2               =============MYC_MYB               --------->bZIP60(2)              --------->ANAC58               <---------O2                     --------->ANAC46       <---------MYB52(2)                       --------->ANAC58 ------>MYB59  --------->ANAC46                --------->SPL7 ------>MYB52(2)  <---------DEAR3(1)         <---------SPL7 ------>MYB46(2)<-----------HVH21     --------->CCA1(2) ------>MYB111(2) <---------At1g77200<---------ARR14(2)                ---------->DOF2 ------>MYB111(1) <---------DREB2C(2)--------->ARR14(2)             --------->At4g35610 ========================MYC_MYB   ----------->ARR10             <---------At4g35610 ------>MYB.PH3(2)<---------DEAR4(1) --------->ARR11(3)        --------->REM1(1)              -------   tagttagcaactaaaccacgtcggtggaaaatgggctcagatatgggcctacgctattggactctacatctgctaaagtcacaaaacaatttgctataaa  12466200                                                                                            ---------                                                                                          <---------At4g35610             <------MYB46(1)                  --------->ZAT14                           <------NtERF2             <------MYB83                --------->ZAT14        --------->TOE2(3)      ------>NtERF2            --------->MYB46(2)           <---------ZAT14 --------->ARR11(3)           <---------DEAR3(1)            --------->MYB59              --------->ZAT18<---------CCA1(2)          <---------DEAR3(1)      --------->TOE2(3)      <----------DOF2<---------LBD16     --------->TOE1(3) <---------At4g35610 -->YAB1    --------->MYB111(1)   <---------YAB1    <----------DOF2      <---------TOE2(3)--------->At4g35610   aaccaatacattagtaggtagactggataagcttttctgaatgtgctctggagtctttatatctagccttagactatggttttcatcggcgctggtgaca  12466300                                                                           <---------AHL20(1)                                                                           --------->AHL20(2)                                                           <------ZmHOX2a(2)                                                    --------->YAB1         --------->AHL20(1)                                                   <xxxxxxxxxxxxxxxxsmallRNA(s)                                                  ------>MYB83             <---------AHL20(2)                                                  ------>MYB46(1)  --------->YAB1                                                xxxxxxxxxxxxxxxx>smallRNA(i)              --------->LBD16                                                --------->AtMYB61 <------ZmHOX2a(2)   --------->ARR14(2)               xxxxxxxxxxxxxxxx>smallRNA(i)  ------->GAMYB--------->ARR14(2)          <---------ARR14(2)             ---------->DOF2         <---------MYB46(3)   --------->ARR11(3)--------->AHL20(2)    ---           --------->YAB1          xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---------AHL20(2) --------->At4g35610        --------->WOX13(1) <------MYB46(1)  --------->MYB46(3)--------->At4g35610    <---------CCA1(2) --------->ANAC58          <------MYB83 <xxxxxxxxxxxxxxxxsmallRNA(s)  --------->AHL20(2) --------->ANAC46 --------->ANAC58   <---------ANAC46<---------TOE1(2) <xxxxxxxxxxxxxxxxsmallRNA(s)   <---------GLK1(1) -->HVH21 <---------ATHB12--------->MYB59<---------WRKY12 <---------ARR11(3)<---------AHL20(2)   ----   gaaacgacatcaatcaaaagttgtttgtttggttatcgctggttcaacgaccaatcgcaagatcagcgatcataaaatttatttttcatatccgctaaat  12466400          <---------AHL20(2)      --------->AHL20(2)     <---------AHL20(2)     <---------YAB1                 <-----------GT1   <---------CCA1(1)                --------->YAB1     --------->CCA1(2)   <---------RVE1(1)            ---------->DOF2       <---------ARR14(2)  --------->AHL20(1)     <---------ARR14(2)           --------->ARR14(2)        <---------------AtSPL8  --------->ARR11(3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <----------DOF2  <---------ARR11(3)    <---------GLK1(1)         --------->ANAC55(2)    <---------YAB1 ------->DOF2           --------->GLK1(1)         <---------ANAC55(2)  --------->YAB1         ------- ----->AHL20(2)         <----------TaMYB80     <------ZmHOX2a(2)  <---------DAG2--------------->AtSPL8   aaaagatattatttagttgattttggatatccctaaaatcacaatctcgatcacgagataggcataaactttatcacaatagaatgtacaatacaaaaaa  12466500  Previous    Next  AGI:  At1g34220.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35730.1); similar to hypothetical protein [Carica papaya] (GB:ABS32229.1); contains InterPro domain Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061) Range:  from: 12462827    to: 12465978    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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