Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <---------ANAC46                                                                               <---------ANAC58                                                                               <---------ANAC58                                        <-------TEIL                    <----------DOF2      <-------                             ----------->GT1       --------->REM1(2)   <---------ANAC58      --------                            --------->ANAC58      ----------->HVH21    <---------ANAC58   --------->ANAC46                            --------->ANAC58 --------->GLK1(2)       --------->ARR11(3)   <---------TOE2(3)                       <-------PIF5    --------->ARR14(1)       --------->TOE1(2)   <---------------AGL15                ---------->DOF2       --------->ARR11(1)        --------->TOE2(2)   --------------->AGL15            <----------ID1<---------AtLEC2  <---------GLK1(1)  ----------->RAV1(2) <-----------------AGL3  <---------GLK1(2)    ------->PIF5   <---------GLK1(2)       ------->TEIL    <------NtERF2 <------ZmHOX2a(1)   aacagattgtcttgaagacaaagcacttgcaaggcaaatagattcgaaatctgtgaagggattgaacctgagagcttgttggcgttcaatataaggaact  12420800                                                                                       --------------                                                                                       <-------------                                                                                      ---------------                                                                                      ---------------                                                                              <--------P                                                                            <------MYB83                      ----------->HVH21                                     <------MYB46(1)                  <---------ZAT2                                           --------->MYB59                  --------->ZAT2                                           <---------MYB46(3)                 ------>MYB83                                             --------->ALFIN1            ------>NtERF2                                              <---------AtMYB61        <----  <---------ZAT14------>MYB46(1)                             <---------HSFB2a(2)      --------------- --ARR14(2)----------->HVH21                                 --------->HSFB2a(2)      --------------- ->ARR14(2)--------->DEAR3(1)                         ---------->DOF2 <-----------RAV1(2)  <---------ATHB12   ggagagtagagaggcgaccaagctctgatgggattggaccagagagagagtttgaagaaaggtcgagaagccttaggtgggtaagttttccaaatgaagg  12420900                         <------ZmHOX2a(1)                       <---------ANAC46                  <------MYB83                  <------MYB46(1)                                                                <---                  <---------MYB46(3)                                                            <----                 --------->MYB46(2)                                                            ------                 <---------AtMYB61                                                             <-----                 --------->MYB111(2)                                                           <-----                 --------->MYB55(2)                                                           ------- ->AGL15         <---------MYB46(3)                                                          <------- --AGL15         --------->MYB111(1)                                                        --------- -->AGL1         <---------DEAR3(1)                                                         <-------- -->AGL3         --------->ALFIN1                <------ZmHOX2a(1)                      ---------->DOF2 --ZmHOX2a(1)   <--------P               <---------ZAT14                               <------ZmHOX2a(1) -->AGL2        <---------MYB55(1)       --------->ZAT14         <-----------RAV1(2) <---------TOE1(3) -->AG        <---------MYB46(3)    <------ZmHOX2a(1)          <-----------HVH21     <---------TOE2(3)   agggattgggccagagaggttggtggaggagaggtttaggaactgtagagaggagagagaagagaggtcagggattgaagacaggttaaggaaagtgtcg  12421000 ---NtERF2 -----LBD16 --->ETT(1)                        --------->ANAC55(2)                     --------->PCF2 ----ANAC46                --------->At4g35610                            --------->TCP20 ----LBD16                 <---------At4g35610                            <---------PCF2 -->ALFIN1                 <---------ZAT14                                --------->TCP15(1) ----HVH21           <---------MYB52(1)                                  <---------TCP15(2) >ALFIN1            <-------GAMYB  <---------ANAC55(2)                   <---------TCP23 ---RAV1(1)        <-----------RAV1(1)               ------->TEIL       <---------MYB46(3)     <-----   gggatagagacagagatgactctgttgtctgcagaacatgtaatgccataccatgaacatggtgtctggtcttgtgggtcccaagaagagaagagtgatg  12421100                                                         <------MYB83                                                         <------MYB46(1)                                                        --------->ALFIN1                                                       <--------P                                                       --------->ALFIN1                                       ---------->DOF2 <<<<<<<<<MYB98                                     <---------YAB1   <---------ANAC46                                   --------->At4g35610<---------ANAC58                                --------->At4g35610   <---------ANAC58                                ----------->RAV1(2)   <-------GAMYB                                <---------At4g35610  <------MYB46(1)                               <-                        <---------ANAC58             <------MYB83                                 ---                        <---------ANAC58           --------->ALFIN1                               <-- <---------AtMYB61    <---------ARR11(3)        --------->DAG2                                    --- ----AtMYB61          --------->ARR11(3)     ---------->DOF2   --------->AtLEC2              --------   gtgatggtctcttgagagagagaagagcttggccatctgatgaaagagaaagagtgggttgggccatggagacccatgaacaaaacaagaacaagaagaa  12421200                                                                                          <------MYB46(1)                                                                                         --------->MYB55(2)                                                                                      <------MYB46(1)                                                                                      <------MYB83                                                                                      --------->MYB55(2)                                                                                      <---------MYB46(3)                                                                                     <---------AtMYB61                                                                                     <---------DEAR3(1)                                                                                     --------->ALFIN1                                                                                   <---------ANAC58                                                                                   <------MYB46(1)                                                                                   <------MYB83                                                                                   <---------ANAC46                                                                                   <---------ANAC58                                                                                  --------->MYB111(1)                                                                                  <---------DEAR3(1)                                                                                  <---------MYB46(3)                                                                                  --------->MYB111(2)                                                                                 <---------ANAC46                                                                               <------MYB46(1)                                                                               <------MYB83                                                                              <---------AtMYB61                                                                              <---------MYB46(3)                                                                             <---------WOX13(1)                                                                            <------------CBF  <-----------GT1                                                          --------->ATHB12 --------ICU4                                                              -------->HAHB4<---------MYB46(3) ------>ICU4                                              --------->YAB1  --------->ICU4<---------ANAC46 -------AHL20(2)                --------->REM1(2)        <---------YAB1   <---------YAB1<---------MYB55(1) ------>AHL20(2)       <---------GLK1(2)           <------MYB83<-----------RAV1(1)--------->MYB55(2)< --->GT1          <---------AtLEC2   <----------ID1<------MYB46(1)        <---------ATHB12<------MYB83   aaaattacttcgttctctctccatggaatctctgtgaagaagacgaaggtgataggtttatgaaaatgttgttgaaatgattggtgggtggtgggtaatg  12421300                                                                                             <-------                               <---------CCA1(2)                                         <---------ANAC58                            <---------ZAT6                           <-------MYC3        <---------ANAC58                        <---------ZAT14                              <-------MYC2     <---------WOX13(1)                --------->ANAC58                                     ------->MYC3    <------------CBF                --------->ANAC58                        <----------ID1              --------->ATHB12      <------ZmHOX2a(1) --------->ZAT14        ------->TEIL          ------->MYC2  <---------YAB1   - ------ZmHOX2a(1)  ---------->DOF2 <----------DOF2     <------ZmHOX2a(1)    <------ZmHOX2a(1)<-------   gaggatgaggaagaagagaagcaaagtgtagtcttatctttttttgttgaaccttgaggagacaagaagcatgtgtaaggactctgtgattgcttaaggt  12421400                                                                                       <---------ANAC58         <------------CBF                                                  <-----------GT1--------->REM1(2)        --------->ATHB12                                                 <----------DOF2 --------->ALFIN1  --------->ANAC46                                                    <---------ARR11(3)<---------LBD16 --TOE2(3)                                                            --------->ARR11(3)--------->LBD16 -------->ZAT6                                                      --------->MYB59    <---------ANAC46 --TOE1(3)                                                <---------At4g35610          <---------ANAC58   ttacactaaaccattgcagaacaagaacatcaagagcgataactgtagataaccatgtgaagctaagagtgaggtctttacattctcttccgtggagaaa  12421500                                        <---------ANAC46                                        <---------LBD16                                       <------NtERF2                                      ------>NtERF2                                  <---------ANAC46                                  <---------DREB2C(2)                                  <---------DEAR3(1)                             <---------MYB46(3)                            <---------AtMYB61                            <---------ANAC46                            --------->ALFIN1                          --------->MYB55(2)                          <---------MYB46(3)                         <---------AtMYB61--------->LBD16                         <---------DEAR3(1)<------NtERF2                         --------->ALFIN1<---------DEAR3(1)                        <---------MYB52(1)<------NtERF2                       --------->LBD16<---------MYB46(3)                <---------DAG2 ----------->HVH21    <---------TOE2(3)                   <----------DOF2     <---------ANAC46<---------LBD16 --------->ALFIN1                       <----------DOF2   ------>NtERF2<----------DOF2----------->TGA1<-------GAMYB     ----------->HVH21      <---------DAG2   ctcgctggctggaagaaactttatccggtggtggtgacggtggccggagcgttagaggttgaagaaggtgaccttggactttgggttttgctttatctct  12421600                             ----------------->AGL1                             <---------ANAC58                             <-----------------AGL1                             <---------ANAC58                        <---------REM1(1)                        <-----------RAV1(1)                   <---------ANAC58                   <---------ANAC46                   <---------ANAC58                   <------MYB46(1)                   <------MYB83                  --------->MYB46(2)                  <---------MYB46(3)                  <---------AtMYB61                                                 --------->YAB1                  --------->MYB55(2)                <---------YAB1         <---------AHL20(2)                  --------->MYB52(2)                <---------TOE2(3)<---------ANAC58                 <---------MYB55(1)             --------->YAB1       <---------ANAC58                <---------MYB52(1)              <---------ICU4   <----------DOF2   <---------YAB1 <--      <----------DOF2   <---------MYB46(3)   --------->YAB1   <-----------GT1   <---------YAB1   <---   ctctgtctctttcttctcgtttggtgttgttgccttcttgggaagactaataataagattgaaattactttgcttattttatatgattataagttttgtt  12421700  Previous    Next  AGI:  At1g34110.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G24240.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G48940.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G56040.2); similar to hypothetical protein OsJ_020981 [Oryza sativa (japonica cultivar-group)] (GB:EAZ37498.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67522.1); similar to hypothetical protein OsI_022739 [Oryza sativa (indica cultivar-group)] (GB:EAZ01507. Range:  from: 12417154    to: 12421167    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version