Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <----------DOF2                        --------->TOE2(3)                      ------>MYB83                      ------>MYB46(1)                                             <---------ARR11(3)                 >>>>>>>>>>WRKY6                                                  --------->ARR11(3)                 <---------WRKY18(1)                                             <---------AHL20(2)                 >>>>>>>>>>WRKY26                                        --------->AHL20(2)                 >>>>>>>>>>WRKY38                                   <---------WOX13(1) <-------TEIL    >>>>>>>>>>WRKY11                          <---------At4g35610<---------AHL20(2) ----->ARR11(3)  >>>>>>>>>>WRKY43                         <---------RAP2.3(1)<---------AHL20(2) ----->ARR14(2) --------->WRKY38(1)                 <---------YAB1  <---------YAB1<---------AHL20(1) ------ARR11(3) --------->WRKY12                 <---------YAB1   --------->ATHB12--------->AHL20(1) ------ARR14(2) --------->WRKY45    <-----------HVH21  <-----------GT1 <---------TOE2(3)         ---- -->GT1    ---------->DOF2 ----------->GT1    <---------YAB1 ------>NtERF2   --------->AHL20(2)  ----   atattcatatagagaaagttgaccaactttagtaaatatgtcatatatatgattatttttcggctccttgattaatgaattaaatatttttaaaaacaat  12366400                                                                                                -----                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                           --------->AHL20(2)                                                                                           <---------AHL20(2)                                                                                           --------->YAB1                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                                                      --------->AHL20(2)                                                  ----------->GT1                 --------->AHL20(2)                                  --------->AHL20(2)                              --------->AHL20(1)                                  <---------AHL20(2)                              <---------AHL20(2)                       <---------At4g35610  --------->AHL20(1)                    <---------AHL20(1)                    <---------At4g35610     --------->AHL20(2)                   --------->AHL20(2) ----->YAB1         <---------ZAT14         <---------AHL20(1)                   <---------AHL20(2) ----->AHL20(2)     --------->ZAT14         <---------AHL20(2)               --------------->AGL15   aatataaaaacaattttgggactgcagataataagtttaaatacaataaattttgtaactaaaatgttatagtcatttactaattttatttaattatatt  12366500                               ------->MYC3                   <---------ICU4        <---------AHL20(2)--------->AtLEC2                                     <---------ZAT14 ---->AHL20(2)     --------->YAB1   <---------ZAT18     <---------ANAC58       ---------->DOF2 -AHL20(1)      <---------ICU4 <-------MYC2             <---------ANAC58  --------->ZAT18 >AHL20(1)      --------->YAB1 <-------MYC3  ----------->HVH21            <---------ZAT18 -AHL20(2)     --------->ICU4  ------->MYC2<---------At4g35610  --------->At4g35610 >AHL20(2)--------->ANAC55(2)------->TEIL  --------->At4g35610  <---------At4g35610   --------->ICU4   atatactcatttacttaataatcatctcatgcacatggtgcagatagatgacatagtttcgttcgtagatgactagagtactaaagtgataagtatacat  12366600                                                              --------->ANAC55(2)    <---------YAB1                                                            <-----------GT1         <----------------                                                         <---------ICU4            <-----------GT1                                                     <---------AHL20(2)          <----------DOF2-----                    <---------AHL20(2)              --------->AHL20(2)       <----------DOF2    -----                   <-----------GT1                  <---------AHL20(2)  ------>ZmHOX2a(1)     <------               ------->TEIL                        --------->YAB1      --------->TOE2(3)      <------   gaattctatcaaacatgtatatttcatttcaaaattttggatttttgaaccaattttaatttttacatatcatcctaaactttctttacgattttggctc  12366700         --------->ARR11(3)     <-----------GT1 --------->AHL20(2)                    <-----------GT1 -AGL1   <---------ARR11(3)         <---------ICU4                                                 <- ---->ANAC58              <---------ARR11(3)                                                       -- ---->ANAC58              --------->ARR11(3)   <-----------GT1----------->GT1     <------------CBF<-- ---ANAC58 ------>ZmHOX2a(2)   --------->AHL20(2)  <----------DOF2           <---------YAB1       --- ---ANAC58<------ZmHOX2a(2)  <----------DOF2  <---------AHL20(2)   <------------CBF         ---------   gcattatatacgatctcacgactaaaattatcttttaatatttacaaatttatcttttaaaaaactgtatattggaaatatgaaaattgagaaataaaaa  12366800                                                                             ----------->RAV1(2)                                                                           ------->GAMYB                                                                          <---------MYB55(2)                 <---------TOE2(3)                                        --------->DEAR3(2)                <-----------GT1                                 --------->ANAC58                --------->MYB52(1)                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              <---------MYB52(2)                              <---------ALFIN1           --------->ICU4                                    <---------SPL7--------->DEAR3(1)      --------->YAB1                                    ------->PIF5      --------->MYB46(3)      ----------->GT1                                   <-------PIF5     ------>MYB83 --------->AHL20(2)                                    --------->ANAC46  ------>MYB46(1) --------------AGL15                              --------->ANAC58       -------->P        <---------GLK1(2) ------------->AGL15                              --------->ANAC58      <---------ALFIN1  --------->At4g35610 ---------------AGL3              *TSS            --------->ANAC46      --------->MYB52(1)<---------At4g35610 ------>TOE2(3) <---------DOF5.7(2) <-------TEIL<-----------GT1 --------->ANAC46   <----------DOF2  - >AHL20(2)------------>CBF <----------DOF2    <-----------HVH21 --------->ANAC58  <---------DAG2  <--   acttaaaatagtaacaattaacgattttgctttaaacatacactctcttgtcactccacgagccctacgcttcccaaccgcctgcctttttcagattacc  12366900                          --------->ATERF1(1)                          <------NtERF2                          ----------->HVH21                         <---------ATERF1(1)                         ------>NtERF2                         <-----------HVH21                        --------->RAP2.3(3)                        --------->RAP2.6(2)                        --------->ANAC46                        <---------ATERF1(2)                        --------->DEAR3(1)                       <------NtERF2                       --------->ATERF1(1)                       --------->RAP2.3(1)                      ------>NtERF2                      <---------RAP2.3(1)                      <---------ATERF1(1)               <-------TEIL                     --------->DEAR3(1)             --------->ANAC58                    --------->ATERF1(1)          --------->LBD16                    <------NtERF2 --------->SPL7 <---------SPL7                   <-----------HVH21           <---------LBD16                 <-----------------AGL1                   ------>NtERF2<---------MYB52(1)  --------->ANAC58           <-----------------AG -         <---------ALFIN1<-----------TGA1    --------->AtMYB61               <-----------GT1        -      <-----------GT1<---------DEAR3(1)      --------->DEAR3(1)            <-----------GT1        <-- <---------MYB52(1)<---------ATERF1(1)   <------ZmHOX2a(2)        ----------------------->TaNAC69(2)- -------->LBD16   --------->DEAR3(1)     ==============================HOX2a_HOX2a           <------- -------LBD16     <---------DEAR3(1)    <-----------HVH21       ------>ZmHOX2a(1)            <-------   tccggtttctaccactctcgccgtcgccgtcaccggtactccgatcacctccgcacgattcatttcctatttgcatttttcacctctctaggtaataact  12367000                                                                                                 <---                                                                                             --------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                          --------->MYB52(1)                                                                                         <---------SPL7                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)    ------>NtERF2                                                              --------->ARR11(3)----    <-----------HVH21                                                     ------>ZmHOX2a(2)<---------LBD16   --------->DEAR3(1)                                              -------->ATHB1     --------->AGP1 ------>NtERF2                                                     --------->ATHB51   <---------ARR11(3) -------->ANAC58                <---------ARR14(2)                 --------->ATHB12   --------->ARR11(3) -------->ANAC46                --------->ARR14(2)                <---------YAB1 ------>ZmHOX2a(2) -------ALFIN1              ------>ZmHOX2a(1)                     --------->ICU4<------ZmHOX2a(2)---- -------->ANAC58       ------>ZmHOX2a(1)      ----------->GT1     <---------AHL20(2)  <---------AGP1 ----GT1          <---------ANAC58          <---------ATHB12      <---------ATHB51   <---------CCA1(2) --ICU4           <---------ANAC58        --------->WOX13(1) <---------ETT(2)  <---------ARR11(3)<---   ccacgccgtctcatcaatttgcttcctctcctcagatttgatttcaatcagtgaattgctctgtcgaaattattgatctacgatcttagatcttacggaa  12367100 <---------ANAC58                 <------ZmHOX2a(2) <---------ANAC58                <---------ARR14(2) ------HSFB2a(1)              ------>ZmHOX2a(2) ->LBD16                    --------->ARR14(2) >ANAC58                    <---------ARR14(2) -HSFB2a(2)              <---------WOX13(1)                                    ------>ZmHOX2a(2) -ANAC55(2)           --------->WRKY38(1)                             <---------ANAC58 >ANAC55(2)           ----------->HVH21        ----------->GT1        <---------ANAC58 >ANAC58             <---------MYB52(1)        <---------ZAT6         <---------ANAC46 >HSFB2a(2)         --------->At4g35610    <---------ARR14(2)      <---------MYB52(1)         <------ ----->HSFC1(2)     --------->LBD16------>ZmHOX2a(2)             <-----------RAV1(1)          <------ ----->HSFB2a(1)    <---------At4g35610 ------>ZmHOX2a(2)      <---------At5g28300  <------ZmHOX2a(2) ------HSFC1(2)   <---------LBD16--------->ARR14(2)           <-----------GT1 <------ZmHOX2a(2)     <   atttcgttccgatttcaatctccggtgactgatccgatctgatcgaatcgtgttacattcaaatttactgttgcttagcgatcgcgatcgaattcatatg  12367200              --------->ARR11(3)                  <---------LBD16              <---------ARR11(3)          <---------GLK1(2)        <---------HSFB2a(2)     --------->GLK1(2)           <---------ANAC58 --------->At4g35610    <---------GLK1(2)        --------->ATHB12 <----------DOF2      --------->HSFB2a(2) ---TOE2(2)  <---------GLK1(1)   <---------ANAC58 <---------At4g35610 ---TOE1(2)  --------->GLK1(1)   <---------ANAC55(2)   --------->DAG2 -----------GT1    <---------ICU4--------->ANAC55(2)  ---------->DOF2--------->HSFB2a(2)          <--   tttttcgattctgtgatatcttcatgactcttgattcgtgactcgattctttagcggaaagtgagtcttctcgagaatgggagattgaagaagtaagaga  12367300  Previous    Next  AGI:  At1g34020.1    Description:  transporter-related. similar to transporter-related [Arabidopsis thaliana] (TAIR:AT4G09810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43591.1); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 12366834    to: 12369158    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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