Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <------ZmHOX2a(2)                                                                                       <---------ARR11(3)                                                                                       <---------ARR14(3)                                                                                       <---------ARR14(2)                                                                                       --------->ARR14(3)                                                                                       --------->ARR11(3)                                                                          <---------HSFB2a(1)                                                                          --------->HSFC1(2)                                          --------->AHL20(2)              <---------HSFC1(2)                <---------DAG2           <---------ATHB12                ------->TEIL --------->GLK1(1)                <----------DOF2        --------->WOX13(1)               <-----------GT1--------->ARR14(2)             <---------AHL20(2)      <---------ATHB12       <------ZmHOX2a(2)         <---------GLK1(1)             <-----------GT1       --------->WOX13(1)       <---------YAB1--------->HSFB2a(1)      <---------ARR11(3)          --------->MYB46(3)       --------->ARR11(3)------>MYB46(1)        <     <---------CCA1(2)      <-----------GT1                <---------ARR11(3)------>MYB83------>ZmHOX2a(2)   tctctctatatctattaactttttgagttattagcatccatcaatcaaatacaagaattgagatcatagcttaagtaccttccattggagatctcatttt  12358500                             --------->ZAT2                             <---------ZAT2                        <---------WRKY18(1)         <---------------AGL15         --------------->AGL15           <----------DOF2        ----------------->AGL3  --------->At4g35610        =======================================================MADS_MADS                          <--        <-----------------AGL3  --------->ZAT2 --------------->AGL15                              ---        ----------------->AGL1  <---------At4g35610                          <----------DOF2  <------   <------MYB46(1)     --------->WRKY12  <---------DAG2                     <---------DAG2   --------   <------MYB83        --------->WRKY38(1)     <---------------AGL15  <----------DOF2        -------- <--------P   --------->DAG2 --------->At4g35610                   <---------ARR11(3)        <------- -------GAMYB---------->DOF2 <---------At4g35610    ---------->DOF2--------->ARR11(3)       >>>>>>>>>   tgggttggaaaccaaaaaagggaccttgaccagcagcttcaagctttttctgtttaaagtactcttgaagctctttagccttttgtctctgaaactccac  12358600                                            <------NtERF2                                          <---------ANAC46                                          <---------DEAR3(1)                                         <------NtERF2                                         <---------ABI4(1)                                         --------->ATERF1(1)                                         <---------LBD16                                         <---------At4g35610                                        <---------ORA47(2)                                        <---------RAP2.3(1)                                        ------>NtERF2                                        <---------ATERF1(1)                                        <---------ERF1                                        <---------DEAR4(2)                                        <---------RAP2.6(1)                                        <---------RRTF1(1)                                       <---------RAP2.3(3)                                       <---------RRTF1(3)                                       <---------RRTF1(2)                                       --------->ALFIN1                                       <---------ANAC46                                       <---------RAP2.3(2)                                       --------->DEAR3(1)                                       <---------RAP2.6(2)                                       <---------DEAR3(1)                                       <---------ATERF1(2)                                       --------->ATERF1(2)                                      <---------ABI4(1)                                      <------NtERF2                                      --------->ATERF1(1)                                     <---------RRTF1(1)                                     <---------RAP2.6(1)                                     ------>NtERF2                                     <---------ATERF1(1)                                     <---------RAP2.3(1)                                    <---------RRTF1(2)                                    <---------DEAR3(1)                                    <---------RAP2.3(2)                                   <---------At4g35610                                   --------->At4g35610   <-----------GT1                 <---------LBD16 -------ZAT14                 <----------DOF2           xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ------>ZAT14               --------->At4g35610         <------ZmHOX2a(1) ---ALFIN1                  <---------At4g35610   <------ZmHOX2a(1) ->ZAT14                  --------->REM1(1)--------->LBD16                                          - ->ZAT18              --------->At4g35610--------->At4g35610 <------ZmHOX2a(1)                      - --ZAT14            --------->MYB46(3)------>NtERF2--------->ALFIN1             <------ZmHOX2a(1)  <- >>>>>>>>LFY    <---------ATHB12  <-----------RAV1(1)<------ZmHOX2a(1)  ----------->HVH21      ------   tgtagttacactcttcccatcaacagctacagctttctgcggcggcggagaaggaggaggagaggaagatggctgtgatggaggaacaggtttttgaggc  12358700                                    <---------HSFC1(2)                ------->MYC3                                    --------->HSFC1(2)                <-------MYC3                                    --------->HSFB2a(1)              ================================             --------->ATERF1(1)    <---------HSFB2a(1)              <---------O2             <------ZmHOX2a(1)     <---------ARR11(3)                --------->O2  <---------MYB46(3)          <------ZmHOX2a(1)   ---------->DOF2             <---------YAB1        <---------MYB46(3) --------->LBD16    <---------AtMYB61                     --------->ICU4  <---------ANAC58 -------->HSFB2a(2)<---------MYB52(1)                <---------At4g35610  <---------ANAC46 -------->LBD16 <------NtERF2 =================================================bZIP_DOF --------LBD16--------->ARR14(2)   --------->ARR11(3)--------->At4g35610  <---------ANAC58      ----- --->ATERF1(1)<---------ARR14(2)  <------ZmHOX2a(1) --------->GLK1(2)<---------TGA1a       --------->GLK1(2)   tcccggagagtaggaggagccgatggtcttcttaaaggaccttctgtctgagagcatctgatgatgaagacacatggcttagtcgttgttgagaatctaa  12358800        --------->At4g35610        <---------ZAT2        <---------At4g35610                                                              --------->At4g35610        --------->ZAT2                                                                   <-------GAMYB       ------->TEIL                             ------>ZmHOX2a(1)                       --------->MYB52(2)       --------->GLK1(2)                    <---------ARR14(2)                        <---------MYB52(1)   <---------------------WRI1               --------->GLK1(2)                   <---------AHL20(2) <----------ID1                             --------->ARR14(2)           ----------->HVH21 ======bZIP_DOF   >>>>>>>>>TBF1   <---------WOX13(1)<-------TEIL       --------->At4g35610 ----->DOF2<-----------HVH21   <---------YAB1   <---------YAB1      <---------At4g35610 <---------MYB46(3)   aagacgacgaagctgtcgaagaagaagatgaagatgatggatttagaatcctgatacattgaatcggtgaagctactgacatttttttgttagttgaatt  12358900                                                                                                    <                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              <------                                                                                         <---------ANAC58                         <----------DOF2                                                 --------->YAB1               <---------AtMYB61                   --------->CCA1(2)                     --------->ANAC55(2)             <----------DOF2                    ----------->HVH21                     <----------DOF2           --------->HSFC1(2)                 *TSS <---------bZIP60(2)                ===============           <---------HSFC1(2)         <----------DOF2      --------->O2 <---------ANAC46 <---------ANAC58   gtctgattttcgaagctttggttctgtcttttggtaatgtctttgtggatgtgatatggccaagtctcatggttatgtgcaaatggtactttcgtaatca  12359000       <-------GAMYB   ------->MYC2   <-------MYC3   <-------MYC2   ------->PIF5   <-------PIF5   ------->MYC3                                                                 <---------GLK1(2)  --------->ANAC58                                                         <---------ANAC46  --------->ANAC46                                                        <---------MYB46(3)  ====================bZIP_DOF                                          <---------WOX13(1)  <---------ALFIN1                                                    --------->ATHB12  =============MYC_MYB                                               <---------YAB1  <---------TGA1a <-------MYC2                                       --------->ICU4  --------->TGA1a <-------MYC3                                     --------->YAB1  --------->ANAC58------->MYC3                                     <---------ICU4             <------ ---------ALFIN1  ------->MYC2                                     -------->HAHB4<---------RVE1(1) --->YAB1        <---------ANAC46                                 <---------YAB1<---------ARR11(3) ----ICU4        <---------ANAC58                  ----------->GT1--------->ICU4--------->ARR11(3) -->ICU4         <---------ANAC58   <---------MYB52(1)       --------->ANAC58 ----------->ARR10 ---ATHB12 ---------->DOF2        <-----------RAV1(1)        --------->ANAC58<--------P       ------- ===========bZIP_DOF           <-----------GT1  ---------->DOF2   <---------ATHB12 <---------AHL20(2)   tcccacgcgcgttgaaagcgcgtgtaatagttttaactgttgtttgacttgaaagctaaaaccaagtaatgatgattgggtagatttttttttaagagct  12359100                                              <---------MYB52(1)                      ----------->ARR10      <-------GAMYB                    ---------->DOF2         <---------MYB46(3)                                     <-                  --------->LBD16           <---------DEAR3(2)                                     --                <---------LBD16            --------->ETT(1)                                    <-----              ------>MYB46(1)           <---------MYB46(3)                                     <-----            <---------MYB59           <-------GAMYB                                        <------MYB83            --------->AtMYB61         <---------ANAC58                      ---------->DOF2<------MYB46(1)          <-----------------AGL1      <---------ANAC58          --------->DAG2            <---------AtMYB61     <---------MYB46(3)              <------MYB83 --------->MYB46(3)  <---------MYB46(3)  --------->MYB59 ---At4g35610 ------>MYB83  ----------->GT1<---------DREB2C(2) ---------->DOF2          <---------MYB52(1) -->At4g35610 --------->MYB52(1)     <------MYB46(1)---------->DOF2--------->ALFIN1--------->GLK1(2)   gaaactttggttaaccaaaccggaaagagccggtttatttggttgtcggttaaccaaagtatttgtaaagtgttgttgaaaagaaattcggtttggttct  12359200                                                         ----------->GT1 --------ANAC46                            <---------AHL20(2)                         --------->MYB46(3) --------->GT1                             --------->AHL20(2)                       <-----------GT1 ----ANAC58                  <----------DOF2<---------YAB1     <-----------GT1      --------->MYB52(1) ----ANAC58          ---------->ID1   <---------YAB1<----------DOF2       <---------YAB1  -----------   tgggtaaattcgatttgttttttgtttttttctttaaaatttgattaaaattggctattttgtataaaccggtcttatttttgtattaaccgatgtaaat  12359300                                 <-----------GT1                              <---------KAN4(2)                    <---------------AGL15                                                --------->ZAT14                    --------------->AGL15                 ----------->GT1                <---------ZAT14                   <-----------------AGL3               <---------ZAT18         --------->TOE1(2) ---                   <-----------------AGL2          <---------ZAT14           --------->AHL20(2)   --- >GT1              ------>ZmHOX2a(2)               --------->ZAT14<---------TOE2(3)      --------->ZAT18   tagagtattggtgataactgatctaattttggaataaaccggtctcattttagtatagtccagttattaagaaaaacaattacatgggaactggactgaa  12359400  Previous    Next  AGI:  At1g34000.1    Description:  OHP2 (ONE-HELIX PROTEIN 2). similar to chloroplast one-helix protein 2 [Brassica rapa] (GB:ABV89664.1); contains domain SSF103511 (SSF103511) Range:  from: 12357890    to: 12358946    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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