Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------ANAC58                                                       <---------ANAC58                                                    <-------MYC2                                                    <-------PIF4                                                    <-------MYC3                                                    ------->MYC2                                                    ------->PIF4                                                    ------->MYC3                                                    <-------MYC4                                                    ------->MYC4                                                    <-------PIF5                                                    ------->PIF5                                                   <---------TGA1a                 <-----------GT1                   ================================================bZIP_DOF              <---------bZIP60(1)                  --------->TGA1a              <---------GLK1(1)                   <---------TOE1(2)              --------->TGA2(1)                  <---------ALFIN1              --------->bZIP60(1)                <------------OsbHLH66            --------->YAB1                     --------->ANAC58                                   ---          <---------TOE2(3)               ----------->HVH21               >>>>>>>ZML2        <-------      --------->TOE2(3)                  <-----------HVH21<-----------HVH21       <---------WRKY18(1)   ----------->RAV1(1)          --------->MYB46(3)------------>OsbHLH66--------->AGP1   ---------->DOF2 -RAV1(2)--------->YAB1    --------->HSFB2a(2) --------->ANAC58   ------>ZmHOX2a(1)  <---------MYB59   atcaacaacattaatgatatcaccatcttcttgaacaactctctgtgactcgcacgtgcttgtcactcctacagttctagctcttgacctaaaagctttc  12350800                                            --------->PCF2                                           <-----------TCP11(1)                      <---------ALFIN1    --------->ANAC58                  <-----------HVH21      --------->RAP2.6(3)                 <-----------RAV1(1)     --------->SPL1(2)               <---------ANAC58          --------->SPL7               ----------->RAV1(2)     <---------SPL7                                   --------->ARR14(2)               --------->ANAC55(2)   <---------HSFB2a(2)                           --------->ANAC58               <---------ANAC55(1)   --------->HSFB2a(2)                           --------->ANAC58               <---------ANAC58   <---------ARR14(2)                             <---------TGA2(2)            <---------MYB52(1)   <---------MYB52(1)                           --------->YAB1      <---------ARR14(2)       <---------ANAC58    --------->ANAC58           <---------ICU4       --      --------->ARR11(3)       <---------ANAC58    --------->ANAC58  <---------TOE2(3)  <---------ARR14(2)      --------->ARR14(2)      ----------------->AGL1 <---------ARR11(3)      <---------YAB1      ----     --------->YAB1  <---------ZAT18 <---------------AtSPL3          <---------TOE1(3) <----------TaMYB80 --->ZmHOX2a(1)<---------ANAC55(2)--------->ARR14(2) --------->ARR11(3)      --------->ICU4   ------- ---DOF2  <---------ZAT6   <----------DOF2--------->ANAC58      <----------DOF2 ----------->TGA1<----   ctcccaaggatactgttacctgtcgcactctttccgtttccagtacggcccacaagaactagggttcttttagggtttgatgatgacgcaaattcccaat  12350900          --------->ARR11(3)                <---------CCA1(2)                            --------->O2          <---------ARR11(3)         --------->ARR14(2)                                  <---------ANAC46          <-----------ARR10          <---------ARR14(2)                                  --------->ANAC55(2)          <---------ARR14(2) ------->GAMYB <---------MYB52(1)                            --------->ANAC58          --------->ARR14(2)--------->MYB46(3)                                           <---------ANAC55(2)         <---------CCA1(2)  <------------MYB.PH3(2)                                      --------->ANAC55(1)       --------->YAB1       <---------MYB111(2)                                          --------->ANAC58 ------->At4g35610          <---------MYB55(2)                                       <-----------HVH21 ----->YAB1                 <---------MYB52(2)                  --------->ICU4  ---------->DOF2 -->WOX13(1)              ----------->RAV1(1) --------->At4g35610          ------>ZmHOX2a(2)--------- -----ATHB12   <---------ALFIN1     <----------TaMYB80          <---------YAB1<----------DOF2--------   catcttccatcatatctccacccatgtccaacaaactcatatacccttatctgaaaaaacagtgagataattgttgatcgcttaaagggtcacgtaaagt  12351000                                                            <---------ANAC58                                                            <---------ANAC58                                                            <---------ANAC46                                                        <---------ANAC58                             --------->ANAC58           <---------ANAC58         ----------------->AGL2 ->DOF2                      --------->ANAC58         <-----------GT1      <---------AHL20(2) ->DAG2                    ---------->DOF2    <------ZmHOX2a(2)            --------->AHL20(2)   -----   tctaatctttgatagagaaatcacaaaatcaaagcaaaaacagtgacgatcgaatattacttgcttgctaagaagaattaaacaccaaaaacagaacaaa  12351100                                                 <---------ATHB12                                --------->MYB52(1)  --------->ANAC58                       ------->GAMYB            --------->ANAC58                      --------->MYB46(3)        --------->ANAC58                                -----                    --------->MYB52(1)         --------->WOX13(1)                             <------                    ------>MYB46(1)         --------->ANAC58         --------->ANAC58 <---------ANAC46                    ------>MYB83----------->RAV1(1) <---------ANAC55(2)            *TSS      --------                  --------->AtMYB61 --------->At4g35610---------->DOF2 ---------->DOF2<---------ANAC58    ===============================RAV      --------->ANAC46      <----------ID1  <---------ANAC58    <-----------RAV1(2)----------->RAV1(1)  --------->ANAC58   --------->CCA1(2)  <---------ANAC58 ---->MYB52(1)    <---------MYB59 --------->MYB46(3)--------->ANAC58 --------->ANAC58 <---------ANAC58   acagagccagaagaatcaaacctaaccacagaatcaacagatgaataagcaatcaagtaaagaagatagagacgaaagaagattacttgcttaaaaaccg  12351200                --------->TOE2(3)                --------->YAB1               <<<<<<<<<ARR2              <----------DOF2               <<<<<<<<<ARR1        --------------->AtSPL8      --------->DAG2         <---------ARR11(3)     ---------->DOF2         <---------AHL20(1)  --------->At4g35610        --------->AHL20(1)                   <<<<<<<GRF7 --------->GLK1(2)           --------->ARR11(3)               ----------->RAV1(2)                  <- ---->LBD16   --------->GLK1(2) <----------DOF2        ----------->GT1                         ------ ---LBD16<----------ID1     --------->RVE1(1)       --------->GLK1(2)                          ------ ->MYB52(1)------------>CBF --------->CCA1(1)   --------->ANAC46----------->HVH21    --------->ANAC46   gagaagctaaagcgacaatcttagagaaaaatatcttttttggactttatacagaatcagtaaaacctgacaagaccagaagtctctgcgaaacaaactc  12351300                        <---------ANAC55(2)                     <------ZmHOX2a(2)                    <---------ARR14(2)               <---------O2            ----------->HVH21         --------->TOE1(2)                                     --------->YAB1         --------->TOE2(2)                                   <---------AHL20(2)        --------->ZAT2  --------->ANAC55(2)      <---------TOE1(1)        <---------At4g35610                      <---------TOE2(1)--------->YAB1 --------->ANAC58        --------->At4g35610                     --------->SPL7<---------YAB1     --------->ANAC58        ----------->RAV1(2)                   <---------SPL7 --------->AHL20(2) --------->SPL7 <---------DAG2<---------ANAC46             --------->ANAC46--------->YAB1    --------->At5g28300 <----------DOF2<---------LBD16           --------->ANAC46 <---------YAB1  --------->SPL7--------->YAB1 --------TOE1(2)------>NtERF2        <---------YAB1      <--------HAHB4   ------>ZmHOX2a(1)  -------- --------->AtSPL8   --------->ARR14(2)    <-----------GT1--------->YAB1  --------->TOE2(2)   -------- --------->AtSPL3 --------->LBD16<---------WOX13(1)     <---------YAB1   <---------SPL7 <---------ATHB12   gtactttatcacctgcgacgcggatcacctattagattgattatacaccgtacgatgtattattataatcttcatcctacggtaagcccaataacaagcc  12351400                                      --------->TOE2(3)                                      --------->TOE1(3)                                 <---------At4g35610                                 --------->At4g35610                               --------->SPL7                             <-----------HVH21                             <---------SPL7                             <---------RAP2.6(3)                             ------>NtERF2                          <---------YAB1                            <---------ANAC58                        --------->AHL20(2)                            <---------ANAC58             <-------GAMYB                           ----                            <---------ATERF1(2)         <---------MYB46(3)                      -----                            --------->DEAR3(1)          <---------DEAR3(2)                     <-----  <-----------GT1      --------->At4g35610   --------->TOE2(3)      <---------AHL20(2)   ------------ ->ANAC58           --------->ICU4  ------>NtERF2      <---------DEAR3(1)---------->DOF2<------------ ->ANAC58   --------->YAB1  --------->ATERF1(2)     ----------->HVH21   <---------ICU4  <------------   catttcacaaactatcagagtaattatctgccgtccgatgccttaaaacttaatccgacggttgaaacatataattaaggcccattagaggcccatatag  12351500                                                            --------->HSFB2a(2)                                                            <---------HSFB2a(2)                                                --------->AHL20(2)                                                <---------AHL20(2)  ---------->DOF2        --------->ATHB12   <---------AHL20(2) ------->GT1           <---------WOX13(1)  <---------AHL20(2) ------>GT1           <------------CBF     --------->AHL20(2)--------->LBD16 ----TOE2(3) --------->WRKY12         <---------MYB52(1)   <---------LBD16     <------ZmHOX2a(1) ----->AGL1  --------->WRKY38(1)   <---------ANAC46   <----------DOF2    *TSS ----------->GT1 -----AG     --------->ETT(2)     <---------LBD16  <-----------GT1---------->DOF2 -----AGL1--------->ANAC46      --------->ETT(2)<---------ICU4   <------ZmHOX2a(1)   gttaaaaagtccacgtagaccgaagattgatttgtctacgggtattttaattttttcttttcccagaggaaagggaagagaggaaacaaaaattagggca  12351600                               <<<<<<<<<TBF1                   <-----------GT1<<<<<<<<<TBF1                                       <---------TOE1(3)               <------------------------ANAC81                             --------->ANAC58    <---------ANAC46        <<<<<<<<<TBF1                --------->ATHB12  --------->ANAC58    <---------ANAC58  <---------DAG2              <---------ANAC58         --------->ANAC46    <---------ANAC58  <----------DOF2<<<<<<<<<TBF1<---------ANAC58 <----------DOF2    <---------TOE2(3)   aaattagcgtattgatgtgtttcacttttcttcttcttcttcttcatcgtgttcgtgtttgatttgcgactttctccaaggaaaatttagggttttcgat  12351700  Previous    Next  AGI:  At1g33970.1    Description:  avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putative. similar to avirulence-responsive family protein / avirulence induced gene (AIG1) family protein [Arabidopsis thaliana] (TAIR:AT4G09950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16380.1); contains InterPro domain AIG1; (InterPro:IPR006703) Range:  from: 12349443    to: 12351183    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g33980.1    Description:  ATUPF3/UPF3; nucleotide binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO46866.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Nonsense-mediated decay UPF3 (InterPro:IPR005120) Range:  from: 12351573    to: 12355003    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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