Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            ------->TEIL                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                    <xxxxxxxxxxxxxxxxsmallRNA(i)                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                              --------->AtLEC2 --------->ZAT18                             xxxxxxxxxxxxxxxx>smallRNA(i) <-----------GT1           <---------At4g35610                             ------>ZmHOX2a(1) <---------ZAT14                    <xxxxxxxxxxxxxxxxxx                            <---------ANAC58   --------->ZAT14    xxxxxxxxxxxxxxxx>smallRNA(i)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <---------CCA1(2) <---------ZAT6       <----          ------>ZmHOX2a(1) <---------ANAC58---------->DOF2       ------>ZmHOX2a(1) --------->At4g35610   tgtgttctcttcctcttgagtaattcgagtccttgcagataaaactaagagcacagcatgtatccctccttctgctagagttagacatctaacaatctct  12338800                         --------->ANAC58               ------>NtERF2               <---------RAP2.6(3)              ------->GAMYB              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              ----------->HVH21              <---------ETT(1)                               ----------->GT1              --------->At1g77200                     --------->ANAC46              --------->ANAC46                        --------->ANAC58              --------->DEAR3(1)                      --------->ANAC58              --------->RAP2.6(2)                 --------->ANAC58              --------->RAP2.3(3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)              --------->DREB2C(2)          <---------------AGL15             --------->DEAR3(2)            --------------->AGL15            --------->ZAT2                ----------------->AG            <---------At4g35610           <-----------------AGL3            --------->At4g35610           ----------------->AGL2            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  --------->ANAC58           <---------ATHB12        --------->ANAC46 --------->ANAC58 ----------------->AGL3  <---------RVE1(1)                <- xxxxsmallRNA(i2)   ----------->HVH21     ----------------->AGL1 <---------ARR11(3)           <------ ------DOF2 <---------ZAT2             <-----------HVH21   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) -----   ttacttatatactcagccgacactgacaagtcaaacagacctgtcccatattaagcaagcaactggtgatatttttgaaatcaattggaatgacaaaatc  12338900                                                                                         xxxxxxxxxxxx                                                                                       <-------MYC3                                                                            <-----------GT1     <xxxx                                                 --------->YAB1            xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)        <---------ATHB12  <-----------GT1       <---------ATHB12          <-----------HVH21 --------- --------ICU4          --------->ANAC55(2)    --------->WOX13(1)      <----------DOF2  ------->MYC3 < ---ARR11(3)        <-------TEIL    <---------LBD16               xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ---->YAB1--------->WOX13(1)       ----------->RAV1(2)         <-----------GT1 <xxxxxxxxxxxxxxxxxxxxx   ataatcccaaatcaatccaagattcatgtaacaatatacctggagtatcaatcacattgattttgtgaccatcttttgtcacaactccatgtgtctgaca  12339000                                                                       <---------DAG2                                                                     <---------TOE1(2)                    ------->PIF5                                <-----------HVH21                    ------->MYC4                               <-----------RAV1(1)                    <-------PIF5                             <---------ANAC58                    ------->MYC2                             --------->ANAC55(2)                    <-------PIF4                             <---------ANAC58                    ------->PIF4                             <---------ANAC55(1)                    <-------MYC3                          <---------MYB52(1)      <---------ANAC58        --------->ANAC58                                 <-------GAMYB <----------DOF2        --------->ANAC58<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <---------ANAC55(2)  <---------ANAC58     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          <---------ATHB12  <---------ALFIN1    <-----------HVH21 ------->TEIL               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------RAP2.6(2) xxxxxxxxxxx>smallRNA(i2)<----------DOF2      xxxxxxxxxxxxxxxx>smallRNA(i) <-----------GT1------>NtERF2 xxxxxxxxxxxxxxxxxxsmallRNA(i2)             <-----------GT1  ----------->RAV1(2) <-----------------AGL1 -->HVH21           <-------MYC2        <----------DOF2 xxxxxxxxxxxxxxxx>smallRNA(i)   --------->SPL7 xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <---------DAG2   <---------MYB46(3)<-----------GT1--------->LBD16 xxsmallRNA(i2)     ------->MYC3    <---------ALFIN1   xxxxxxxxxxxxxxxx>smallRNA(i)  <-----------HVH21   tttcatggtcacaccagaagcatgtgcctttgaagcaaacaccttttttccaatgaggctgttacctgtcgcactttttccattccctgtccggcctact  12339100                    ----------->HVH21                  <----------DOF2         <---------At4g35610                          --------->At4g35610                 <---------ANAC58         --------->At4g35610                          <---------At4g35610                 <---------ANAC58    <-------GAMYB                              <----------DOF2            --------->ZAT2 ----------->HVH21                                    ------>ZmHOX2a(1)            <---------ZAT2<---------KAN4(2)                                    --------->TOE2(3)   <-            <---------At4g35610     <-----------RAV1(1)                     ------->TEIL        <----            --------->At4g35610 <----------DOF2            <---------ICU4--------->AtLEC2 <-------TEIL       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <---------ALFIN1        <-------TEIL    --------->MYB52(2)   aaaactatgttttcagcttgctttgacgaatgacctttctgttgagctccacccttgttcatcttcacaaaattcatgcatcctttgttagatgcataac  12339200                                              <---------AHL20(2)                                        <------ZmHOX2a(1)                                <---------ARR14(2)                                   <-------MYC3                                          --------->ARR14(2)                            ---------->DOF2  <---------AHL20(1)                 <---------AHL20(2)                         --------->HSFC1(1)  --------->AHL20(1)                 --------->AHL20(2)       --------->DAG2    --------->HSFB2a(2) <---------AHL20(2)           <---------AHL20(2)      ---------->DOF2    <---------HSFB2a(2) --------->AHL20(2)     <-----------TBP      <---------ARR11(1)    --------->YAB1       <---------HSFC1(1) --------->YAB1        --------->AHL20(2)     --------->ARR11(3)  <---------TOE2(3)  <----------DOF2   ----------->GT1            <---------AHL20(2)    <---------CCA1(2) --------YAB1   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            <---------AHL20(2)  <-------TEIL --- -------------AGL3--------->ZAT6   ------->MYC3        <----------DOF2  <---------AHL20(2)      <----   tattaatgaaaagttggctaacactttctagaaagcacatgaggaaatataatgtgtctttgcataatttatatataaaaatttaaattcatatctacta  12339300                               --------->YAB1                             <---------TOE2(3)                               ----------->GT1                          <---------AHL20(2)           ------------>CBF   ------------------------>ANAC81       --------->AHL20(2)      --------->YAB1--------->YAB1                    <------------CBF  --------->AHL20(2)  ---------->DOF2--------->WOX13(1)                ------------>CBF <---------AHL20(2)       <------- ------>YAB1    <---------AHL20(2)          ----------->GT1        --------->AHL20(2)   <------ZmHOX2a(1) --------CBF    --------->AHL20(2)        ---------->DOF2 <---------TOE2(3)     <---------YAB1   ttgtaaaagcataaacaataaatcaaaatgaaatcgtaaaacagaaaagaaaaatcaattgaagttagatttaattaatgttattatgcaggattaagat  12339400                        <---------ANAC46                        <---------ANAC58                        <---------ANAC58                 <------------CBF                -------->ATHB1                 <---------AHL20(2)                <---------ICU4                --------->AHL20(1)                --------->YAB1                <---------AHL20(1)       <---------ZAT18                --------->ATHB12              <---------ARR11(3)       --------->ZAT14               <---------YAB1           <-----------GT1                <---------ZAT14               --------->ICU4    <-----------GT1                       <---------ARR14(2)        <---               <---------ATHB12 --------->AHL20(2)                     --------->ARR14(2)       ----- --TOE2(3)  <---------AHL20(2)  <---------AHL20(2)         ------------>CBF  <----------DOF2---------   gtcattctaaatttttaatcattgtttcttgcatttaaacatttactatatattttctaaattcaatttgtagtatactcttttgtatgtattagcacta  12339500          ------->MYC2                                                                        <------          <-------MYC2                                                             --------->ARR11(3)          ------->MYC3   <---------ALFIN1                                    <---------AHL20(2)    --  --------->MYB52(1)    <---------WRKY38(1)                              <--------HAHB4   ----------- ------TOE2(3)  ----------------------->TaNAC69(2)                       <---------ICU4   ------->TEIL ----->DOF2--------->ALFIN1<---------ALFIN1                 --------->YAB1  --------->AHL20(2)------- >ZAT6    <-------MYC3  <---------ZAT18          <-----------GT1        <---------ATHB12  <----------   aagttaacagaacgtggtcatcttggtccacacttatctattggcattttgtttctcttcaaaaatagtattccatcattttatatatcatgtatgtaca  12339600         <---------AHL20(2)         --------->AHL20(2)     --------->AHL20(2)     <---------AHL20(2)   <---------AHL20(2)   --------->AHL20(2) --------->AHL20(2)                              <---------TOE2(3) <---------AHL20(2)                          --------->TOE2(3) -TEIL --------->AHL20(2)                   <---------YAB1 ------->AHL20(2)                          <---------TOE2(3)                                   ------ ---->AtSPL8                              <-----------GT1                              <---------AHL20(2) >TEIL <---------AHL20(2)     <-----------GT1--------->YAB1                        <---------DAG2 -----AtSPL8         <-------TEIL   --------->YAB1                 --------->YAB1  <----------DOF2   tatatatatatatatatatcaaatacatcgtttaacaattgtatttacgataatgttttacaaaaacaaacaaaatagttgaatactttttattttcaaa  12339700  Previous    Next  AGI:  At1g33950.1    Description:  avirulence-responsive family protein / avirulence induced gene (AIG1) family protein. similar to AIG1 (AVRRPT2-INDUCED GENE 1), GTP binding [Arabidopsis thaliana] (TAIR:AT1G33960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16380.1); contains InterPro domain AIG1; (InterPro:IPR006703) Range:  from: 12333026    to: 12339162    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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