Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                               ------                                                                                             <-------          <---------RVE1(1)                                                                  <-------         --------->ARR11(3)          --------->TOE2(3)       >>>>>>>>>RAP2.2              --------->GLK1(1)       --------->ANAC46              --------->YAB1        --------->ARR11(3)             <---------GLK1(1)     <-----------GT1                <<<<<<<<<ARR2          <---------ARR11(3)            <---------ARR11(3) --------AtSPL8                     <<<<<<<<<ARR1     --------->AHL20(2)                 --------->ARR11(3) ------->AtSPL8        <-----------GT1           <------ZmHOX2a(1)                     <---------TOE2(3)   acatattctacgatatttagactattttcgctctaacaatcttagaaaataggaaattcaatatctaaaaattttagaacatgtcttctaagatttcctg  12290800                                                                                   <---------AHL20(2) ------AtLEC2                                         ----------->GT1        --------->HSFB2a(2) >ZmHOX2a(1)                                   --------------->AGL15      <----------DOF2 <---------AHL20(2) --ANAC58                                      ====================================================== --ANAC58                        ------->TEIL  <---------------AGL15 <-----------GT1 <---------TOE2(3)   catgttctaaattatgtgcgaaattgttttctacgaatttctatagtttctgaaaacagtagaaaacgttttctctcttttagaattaatatttaaaaca  12290900                                                 <---------ARR14(2)                    <---------ANAC58                                                 ------->TEIL                          <---------ANAC55(2)                                                 <---------ARR11(1)                    <---------ANAC46                                                 --------->ARR14(2)                    <---------ANAC58                                 ------>ZmHOX2a(1)                                <---------ICU4                                 --------------->AGL15                         <---------AHL20(2)  <-                                 <---------------AGL15                        --------->AHL20(2)   --                                ----------------->AGL2                        <---------AHL20(2)   --                                =====================================================================                                <-----------------AGL2                     <---------AHL20(2)      <-                                ----------------->AGL3                    --------->ICU4        -----                                --------->TOE2(3)--------->GLK1(2)     --------->AHL20(2)     <------                                <-----------------AGL3                 <---------AHL20(2)  --------->AHL20(2)                            --------->GLK1(1)   <---------CCA1(2)   <---------AHL20(2) <---------ANAC55(1) <---------AHL20(2)         <---------GLK1(1)   <---------ARR14(1) --------->AHL20(2)  --------->ANAC55(2) --------->AHL20(2) --------->AHL20(2)    ---------->DOF2          <---------AHL20(2)<-----------GT1 =================================================MADS_MADS---------->DOF2--------->AHL20(2) --------   tatttaaaattttgtttctaaattacttagaattcctaaatatagaaagcgaatctttgaaaaaagaaattaaatatttattaaatattacgttttaatg  12291000            <---------TOE2(3) --------ARR11(3)                                                                                   - ------->AHL20(1)                                   --------->AHL20(2)                             -- ------->ARR11(3)        <-----------GT1            <---------AHL20(2)                            --- ===========================================MADS_MADS <---------YAB1                            <xxxx --------AHL20(1) <---------YAB1                    --------->ATHB51                   <---------AHL20(2) ---->YAB1  <---------TOE1(3)                       <---------ICU4             <----------ID1   <xxxx ---TOE2(3) <---------YAB1                      <---------YAB1        ----------->GT1  --------->AHL20(2) ->YAB1  <---------MYB52(1) --------------->AGL15  --------->ICU4   ---------->DOF2   --------->AHL20(2)   atatattttctgttaagattacgatttttactgggtttagaaaacaaattctaattatttttagaatacagaaagaaaaaaacaccaaaaaaatttgtaa  12291100                                        ------>ZmHOX2a(2)                                      --------->ARR11(3)                                      <---------ARR11(3)          --------->ZAT18        -------->ATHB1                                                 <----          <---------ZAT18        --------->ATHB51                                               ----- -------->MYB52(1)           ------------>ATHB5                                       --------->YAB1 ------->TOE1(2)          --------->ZAT18                               <---------ANAC58       <----- ------>MYB46(3)          <---------ZAT18<----------DOF2                <---------ANAC46     xxxxxxxx xxxxxxxxxxxxxxxxxxsmallRNA(fl3) --------->ATHB12                       <---------ANAC58<---------YAB1 xxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------YAB1 <<<<<<<<<TBF1 <----------DOF2        <-----------GT1   acaaacgatttgtgccctagtcaatttgtgccctattattgatcttttcttcttcacgttcttctttttccatctcgtgttctgtttttcattatacata  12291200                      <------------CBF                 --------->ALFIN1                <-------MYC3                ------->MYC2                                                     <---------------AGL15             <---------ANAC58                                                    --------------->AGL15             <---------ANAC46                      <---------YAB1               <-----------------AG        --------->ALFIN1                        <---------AHL20(2)              <-----------------AGL1       <------ZmHOX2a(1)                        --------->AHL20(1)              <-----------------AGL3 -----ARR11(3)  <-------MYC2             --------->ALFIN1                       <-----------------AGL2 ---->ARR11(3)  ------->MYC3<---------YAB1      <---------AHL20(1)       <------NtERF2 ----CCA1(2) <---------ANAC58         *TSS----------->GT1              <---------DEAR3(1) xxxxxxxxxxxxxx>smallRNA(se3)--------->YAB1     --------->AHL20(2)   <-----------HVH21             --   tctatgtgaggagtggcatgtggagattgtatgataacaaggagtggaaatttattgttgatgaaaaaaatcgtcggagattactgtttttggaattgac  12291300                                                                                                   <-                                                                                           ------>ZmHOX2a(2)                                                                                           ==========                                                                                          ===========                                                                                          <------ZmHOX2a(2)                                                                                         <---------ARR14(2)                                                                                         --------->ARR14(2)                                                                                         <---------ARR11(3)                                                                                         --------->ARR11(3)                                                                                         <-----------ARR10                                                                                        <---------CCA1(2)                                                                                      --------->ANAC46                                                                                      --------->ANAC58                                                                                      --------->ANAC58                         <-----------HVH21                                           <---------LBD16                  <---------At4g35610                                     <---------At4g35610   <----           --------->ARR11(3)                                            --------->ANAC58------->TEIL           <---------ARR11(3)                                    --------->ALFIN1    --------->LBD16- ------->REM1(1)  --------->At4g35610             --------->TOE1(2)      --------->ANAC58<---------AGP1   tacaactttcgaagagcttaagctgatggtcagagaagactatggaatagaacgtagtacaaacgatgtggagttaagctacttatccacggatcttagt  12291400                                                                                           <---------ANAC46                                                                                           <---------ANAC58  <---------WOX13(1)       --------->MYB52(1)                      >>>>>>>>>>GT-3b      ----------->HVH21 <---------ANAC58     <---------YAB1                            <----------ID1      <---------ANAC46 <---------ANAC58   --------->YAB1                            ---------->DOF2       <---------ANAC55(1) --------YAB1      <---------YAB1                   <---------ANAC46          --------->DAG2 =================HOX2a_HOX2a          ----------->GT1   ----------->GT1     ---------->DOF2 =================HOX2a_HOX2a        <--------P     <---------ANAC58       --------->At5g28300<------ -----ZAT6 ------>ZmHOX2a(1)  ------->GAMYB      <----------DOF2----------->GT1     <---------YAB1 -------->ATHB12   --------->ICU4  ----------->GT1  <---------ANAC58      ----------->GT1  <---------ANAC58   gttgattgtcttcctgttgttatgatgaataacagacaggttagtaattttctttcgtattgcaaaaagaaaaatacggtaaagttatgtgtgacgttca  12291500                                                                                         ----------->RAV1(1)                                                                                         <---------RAP2.6(3)                                                                                         ------>NtERF2                                                                                        --------->RAP2.6(2)                         ----------->GT1                                                <----------ID1                       ---------->DOF2                                                  --------->DEAR3(1)                   <---------------AtSPL8             <---------GLK1(2)            ---------->DOF2               --------->DAG2                         --------->ARR14(2)   <---------ANAC58              ---------->DOF2                      <-----------RAV1(2)     <---------ANAC58     -----             --------->CCA1(2)                 <------ZmHOX2a(1)       <---------GLK1(1)<---------ETT(1)    <---------ANAC46----------->GT1          <---------TOE2(3)         <---------At4g35610     ------ -TEIL      --------->ARR11(3)   <---------------------WRI1     ----------->HVH21<---------AHL20(2)   atggtggagttgaagataaaggaggtaaagaaaaattcgatttgaataaggaaccagatgctccaagtgatggagatgcttattttaaagccgacaaaaa  12291600            <---------MYB46(3)         <---------ANAC46    <------MYB46(1)                                                      --------->YAB1    <------MYB83                                                    --------->ANAC58                <   --------->MYB46(2)                                       ---------->DOF2                    ------   --------->MYB111(1)    --------->MYB52(1)      ---------->DOF2   --------->ANAC58         <-------   --------->MYB59   <----------ID1           <---------------------WRI1 <---------ICU4      <------- ---->DAG2 <---------AtMYB61         xxxxxxxxxxxxxxxx>smallRNA(i) ---------->DOF2      ----------->HVH21 ---->DOF2 --------->ALFIN1       <-----------HVH21 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     <-------   agtattaggtagagtggtggaagaagacaaacagtctgtcatcgatttggccaaaagtccaaaatagcgaaagcatcatcacggtgcaagtgatggagtg  12291700  Previous    Next  AGI:  At1g33855.1    Description:  transposable element gene. Mutator-like transposase family, has a 1.7e-18 P-value blast match to Q9SKL7 /23-182 Pfam PF03108 MuDR family transposase (MuDr-element domain) Range:  from: 12291238    to: 12292481    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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