Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------ARR11(3)                 --------->ARR11(3)                 --------->ARR14(2)                                                           <------                 <---------AGP1                                                        ------>MYB83                 <---------ARR14(2)             <----------DOF2                        ------>MYB46(1)                <---------CCA1(2)<---------TOE1(2)                                     --------->MYB52(1) -------->AHL20(2)  <----------DOF2         <---------CCA1(2)   <----------DOF2    >>>>>>>>>>MYB80 ---------AHL20(2) ------>ZmHOX2a(2) <-------TEIL   <-----------GT1           --------->AtLEC2-------   ttttaatttttgatttttggatctttattttctctcatgttcatttctatcttttctctctctcaactttgttcgaattcattcaaaccaaacagaaaca  12287800                              --------->ARR14(2)                              <---------ARR14(2)                              <---------GLK1(2)              <---------ANAC55(2)                            <---------TOE2(2)                --------->ANAC58                            <---------TOE1(2)                --------->YAB1                           ------>ZmHOX2a(1)                 --------->ANAC58                           --------------->AGL15             ----------->GT1                           <---------------AGL15             --------->ANAC55(2)            <--------                  --------->ANAC58                           --------->ANAC55(1)          <---------ICU4                  --------->ANAC58                           --------->ANAC46             --------->YAB1                 <-------TEIL --------->ARR11(1)          ------->GAMYB                  --------->ICU4                --------->CCA1(2)              <-----------RAV1(1)                       <---------ATHB51               <---------ARR11(3)        --------->AHL20(2)--------->MYB52(1)   =====================       <-----------GT1    <-----------------AGL2          ================================MYC_MYB    <---------ARR14(2)    <-----------------AGL3         <---------MYB52(2)     <---------ANAC46    --------->ARR14(2)    <-----------------AG--------->ARR11(3)                <---------bZIP60(1) < ---HSFC1(2)   <---------ARR14(2)     --------->ATHB12   --------->MYB46(3)     --------->bZIP60(1)<- -->HSFC1(2)   --------->ARR14(2) ----------->GT1        <---------MYB55(2)     <---------TGA1a   <--   tcgccgtatttactcaagatacacaattcctagatttggataattgaatatgttgttcaacaaacgtaacatctaattagtgatgtgagaaattatgatt  12287900                <---------ANAC58                   --------->HSFB2a(2)         --------->LBD16                           --------->HSFC1(1)        --------->ANAC46                ----------->GT1    <----------DOF2            <---------TOE2(2)   <---------HSFB2a(2) -YAB1 <---------LBD16   --------->ANAC58        ------>ZmHOX2a(1) --------->YAB1 ==============bZIP_DOF  --------->ANAC46    <---------ARR14(2)  <---------TOE2(3) -----------------AGL1   --------->ANAC58    --------->ARR14(2) ---------->DOF2--------->ANAC46 --------At5g28300     ---------->DOF2 --------->LBD16     <---------------AGL15                    - ---------GT1   <---------ANAC58       ------>ZmHOX2a(1)   --------------->AGL15             --------   ttaccgctttgcgcaatttcttgatcaaagccataggtttcctggtaaatcctctagaaaaccttttaaagataacaaaacacatcatcagtctcacaaa  12288000                                                                                        <---------ETT(2)                                                                                        <---------ZAT18                                                                                     <---------ANAC46                                                                               <---------ARR14(3)                                                                               <---------ARR14(2)                                                                               --------->ARR14(3)                                                                    --------->ICU4  <---------DEAR3(1)                                                             <---------At4g35610 ------>ZmHOX2a(2)                                                        <---------ANAC55(2)    <-----------ARR10                                                       <---------LBD16         --------->AGP1                                                     --------->ARR14(2)        --------->ARR11(3)                       <------MYB46(1)               <---------ARR14(2)        --------->ARR14(2)  --                       <------MYB83    <---------MYB52(2)    --------->At4g35610<------ZmHOX2a(2)<--- -------->WOX13(1)    --------->MYB59 --------->At4g35610--------->LBD16       <---------ARR11(3)---- ->ANAC46---------->DOF2        ---------->DOF2   ----------------->AGL1     ----------->ARR10  <----   accaattagacaaaagcgttttgtttggttcaaagaaagaagctaaccttctgcgaatacgggaactgaaatgtttgacaagatcttcggtggacatgtc  12288100                                                                         -------->P                                                                        ------->GAMYB                                                                       --------->MYB46(3)                                                                       <---------MYB111(2)                                                                       <---------MYB55(2)                                                                   --------->LBD16                                                      <-----------GT1----------->RAV1(1)                                                 <----------DOF2  --------->ANAC58                                            --------->ARR14(1)    --------->ANAC46               ----                         ---------->DOF2    --------->GLK1(2)     --------->ANAC58              -----             ===============HOX2a_HOX2a    --------->ARR11(3)     --------->RAP2.3(2)      --------->LBD16             <------ZmHOX2a(2)             <---------ARR14(2)     --------->RAP2.6(2)      ------>NtERF2            --------->ARR14(2)       <---------HSFB2a(2)          --------->RRTF1(2)      --------->ANAC46 -------->DOF2         ----------->HVH21   <---------GLK1(2)     --------->RAP2.3(1)   <---------ARR14(2) ------HSFB2a(2)     ------>ZmHOX2a(1)     <---------ARR11(3)   <---------At4g35610    --------->ARR14(2) ----->HSFB2a(2)     --------->At4g35610   --------->ARR14(2)   --------->At4g35610   <---------GLK1(1) -----ETT(2)<---------ARR11(3)       --------->HSFB2a(2)       --------->ANAC46       <---------CCA1(2)   gagaagcgcatcgagatcgactcctctgaaagaaaacttcttgaagattctctttttcacaattccagccgcaacaacctctggttccatatccgcctat  12288200                                                     <---------AHL20(2)                                                    <---------AHL20(1)                                                    --------->AHL20(1)                 <-----------RAV1(1)                                                    <---------AHL20(2)                <---------YAB1         <---------bZIP60(1)                        --------->AHL20(2)               <------------CBF         --------->bZIP60(1)                  --------->ANAC46                      -------->ATHB1         <---------bZIP60(2)                  --------->ANAC58                      --------->ATHB12      ----------->TGA1                        --------->ANAC55(2)                   --------->YAB1      ----------->HVH21 ------------>CBF      <---------ANAC55(2)                   <---------ICU4    --------->ANAC55(2)--------->YAB1 --------->TOE2(3)                            --------->ICU4  <-----------GT1      ------->GAMYB  --------->TOE1(3)                            <---------YAB1 ----->AHL20(2)        --------->TOE2(3)      --------->ANAC58                     <---------ATHB12 ------>TBP           --------->MYB46(3)    --------->YAB1              <------------CBF       ------   aaattcacatgacgagacattacaaccacaatgttcgaaaccttaatcacgaaataaaatttcagagagacagagattggaactaatcattgttggatcg  12288300                                                                                          ------>NtERF2                                                                            <---------AHL20(2)                                                    --------->ANAC58       <---------AHL20(2)                                             ---------->DOF2               --------->AHL20(2)     ---                                        --------->At4g35610              ------>MYB83    --------->RAP2.3(3) ------->TEIL                  ---------->DOF2      --------->ANAC58     ------>MYB46(1) --------->DEAR3(1) >ZmHOX2a(2)     ---------->DOF2        <---------At4g35610   --------->TOE2(3)        <---------ZAT18   atgaaactctaaaaatccacaaagtctcaaaataaaagtgtctgctcaaaagacaaacaacttaacttaaacaccaaataaataggtagcgcagcctata  12288400                                  ----------->HVH21                                  --------->WRKY12                          --------->ICU4                                                           --                   <------------CBF                                                               <--                 --------->ARR11(3)                                    <------------CBF      <-------                 <---------ARR11(3)     <---------MYB52(1)   --------->ANAC58                <-------                --------->YAB1--------->AHL20(2)             --------->ANAC58                --------       <----------DOF2 <---------YAB1  <-------GAMYB        --------->DAG2                   <-------       <---------DAG2----------->GT1<---------At5g28300    ---------->DOF2            <---------AHL20(2) ------>ZAT6   <---------YAB1 <---------AHL20(2)   <---------YAB1 --------->AtLEC2   --------->YAB1<-   actctaaaactttttttatgatattgtgatatttatttgaccgttagaaaaatatgaatggaaaagccattcaaattggtctaactatattaatggggtg  12288500 ------->AHL20(2) --------DOF2 --ANAC58 --ANAC46                    --------->YAB1                      <---------ANAC46                 --- --->GT1                    <---------YAB1                       <---------YAB1            --------->ANAC58 --ANAC58       --------->AHL20(2) ----------->GT1               <---------ANAC55(1)       --------->ANAC46 --------AHL20(2) --------->AHL20(2)    --------->ICU4 <---------YAB1     <----------DOF2  --------->ANAC58   atttattgtttcattcatttttatatagttatgaaaattgtattaatgggctaagttattatctattatgtgtgttcttttgacattgctaacacacaaa  12288600                                                   <---------ANAC58                                                   <---------ANAC58                                                <---------MYB52(1)                                              <---------ANAC58                                -------                                              <---------ANAC58                              ---------                                          <----------DOF2                                <-----------GT1                                          <---------GLK1(1)                          <---------TOE2(3)                                         <---------ANAC58                --------->MYB52(1) --------- ------>AHL20(2)                         <---------ANAC58  <---------AHL20(2)     <---------YAB1   aaaaataaaacgttttgaaaacaatataaacatttgtaacatggctttccgtttcttacatttattcagtataactaatggactattaatgtaacattat  12288700  Previous    Next  AGI:  At1g33850.1    Description:  40S ribosomal protein S15, putative. similar to 40S ribosomal protein S15 (RPS15E) [Arabidopsis thaliana] (TAIR:AT5G43640.1); similar to At1g04270-like protein [Arabidopsis lyrata] (GB:ABY65213.1); contains InterPro domain Ribosomal protein S15, eukaryotic/archaeal; (InterPro:IPR005713); contains InterPro domain Ribosomal protein S19/S15; (InterPro:IPR002222) Range:  from: 12287893    to: 12288190    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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