Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->TGA1a                                                           --------->ZAT14           --------->At4g35610                                                           <---------SPL7            <---------O2                                                         --------------->AtSPL8      --------->ZAT2                                                    --------->AtMYB61                ----------->RAV1(2)                                                    ------->GAMYB                    <---------ZAT2                                                    ===========================================MYC_MYB         <---------At4g35610                      -------->P --------->SPL7          --------->O2         --------->At4g35610                      =============================================MYC_MYB     <-------GAMYB                             ================HOX2a_HOX2a           ================    <---------MYB46(3)                         ==============================HOX2a_HOX2a      <------ <---------ANAC46                    --------->REM1(2)  ------>ZmHOX2a(1)            <---------At4g35610 <------MYB83                     <---------ANAC46------->TEIL                      ------>NtERF2 <------MYB46(1)               <-----------GT1 <------ZmHOX2a(2)                   <---------ALFIN1 -------->MYB111(2)        <----------DOF2    <---------ARR14(2)                --------->ANAC46 ---------AtMYB61         =====================================HOX2a_HOX2a      --------->ANAC58 -------->MYB55(2)        ------>ZmHOX2a(2)   --------->ARR14(2)                --------->ANAC58 -------->MYB46(2)      <---------ARR11(3)    <-----------ARR10             --------->ZAT6  --------- -------->MYB111(1)     --------->ARR11(3)   --------->At4g35610  <---------ALFIN1--------->MYB46(3) ---------MYB46(3)<---------YAB1<---------At5g28300--------->MYB46(3) ------>ZmHOX2a(1) <-----------HVH21   gtttggtggttatctgaaccatgtttgatcttttcaccgtgtatagcagatcaacctcctccgtactccctcctctaaacactagccacctgtcatgcat  12284900                          <---------YAB1                       <---------YAB1                      <---------ARR11(3)                                                           --                      <-----------GT1                                                             <--                  ------>MYB46(1)                                                          <---------AHL20(1)             --------->YAB1            ---------->DOF2                                     --------->AHL20(1)            <---------ATHB12        --------->YAB1                                         --------->AHL20(2)     --------->At4g35610 <----------DOF2                                     --------->ZAT14   ------    <---------ARR11(3)--------->ARR11(3)--------->DAG2           <---------ARR11(3)        <---------AHL20(2)  --------->ICU4  ------>MYB83  <---------YAB1                   --------->ARR11(3)     --------->YAB1 ===================================bZIP_DOF                    <---------CCA1(2)      <---------AHL20(2) ---AtLEC2  --------->MYB46(3)--------->YAB1            <---------AHL20(2)   --------->ZAT18   <----- >AtLEC2  --------->WOX13(1) <---------YAB1             <---------YAB1       <---------ZAT14   <-----   ggtcattatctgcaatcaccaaattatctttattatactaataaagctagctctattttttattgtatatctagttatgtgctctgtttttaataaattt  12285000                                                   ------>ZmHOX2a(1)                                                   =================================HOX2a_HOX2a                                                <------ZmHOX2a(2)                                                ==================================HOX2a_HOX2a                                               --------->ARR14(2)                                               <---------ARR14(2)                                               <---------ARR11(3)                                               --------->ARR11(3)                 <---------ALFIN1                                               --------->ARR14(3)               ------>ZmHOX2a(1)                                               --------->AGP1                 ------>ZmHOX2a(2)       <----------DOF2                         <---------ARR14(3)           --------->ARR11(3)      <---------------AGL15                    <---------GLK1(2)            <---------ARR11(3)   ------>MYB83                         --------->WOX13(1)                  <---------ARR14(2)   ------>MYB46(1)            --------->HSFB2a(2)------>ZmHOX2a(2)          --------->ARR14(2) ----->TEIL---------->DOF2    <---------HSFB2a(2)=================================HOX2a_HOX2a ---------GT1            --------->MYB52(2)  ----------->ARR10         ---------->DOF2 --------->AtSPL8     --------->TOE2(3)--------->MYB46(3)   --------->REM1(2)<------ZmHOX2a(2) ----------AtSPL3   <---------ARR11(3)------>MYB83 ==================================HOX2a_HOX2a ----------AtSPL8   --------->ARR11(3)------>MYB46(1)    <---------ANAC46  <------ZmHOX2a(1)       <-   gtaccttccctttcaaagtcaagaccttagttccaaaaccatccatcaagatcctcttctcgtgaagactaaaaaaaggatccttcaccttgaacaacaa  12285100                                                            ------>ZmHOX2a(2)                                                           <------ZmHOX2a(2)                                                     <---------SPL7                                                     --------->LBD16                                     <---------ARR11(3)--------->SPL7                                   --------->DOF5.7(2)<---------SPL1(1)                                   <---------MYB52(1)<---------SPL1(2)       --------->ZAT14                                  <-------GAMYB     <---------ANAC46         <---------ZAT14                               <---------MYB52(1)   <---------ANAC58         --------->At4g35610  ---                              <---------SPL7        <---------ANAC58         <-------TEIL  <---------                            --------------->AtSPL3<------------------SPL14   <---------At4g35610 <---                           <---------DOF5.7(2)    ------>MYB46(1)            --------->ZAT18    <----                           <---------At5g28300    ------>MYB83    <---------ARR14(2)<---------ZAT14       --------->LBD16    <-----------GT1        ------------------>SPL14   --------->ALFIN1    -----     <---------LBD16    --------->HSFC1(2)   <---------ALFIN1     <---------ARR11(1)--------->ZAT18 ----------GT1<---------MYB52(1)--------->SPL7  --------->AtMYB61 --------->ARR14(2)--------->ZAT14   gtttccttccgcattcgttatcacgaagttaccgtccgttatcttcaacaccttccgtacgatcgccaaatctacagggtgcagagagcagtactttgga  12285200                                  --------->ATERF1(1)                                  <------NtERF2                                 --------->At4g35610                                <---------ARR14(2)                                --------->ARR14(2)                               --------->ATERF1(1)                               <------ZmHOX2a(1)                              <---------ATERF1(1)                            --------->ATERF1(1)                            <------NtERF2                          <---------DEAR3(1)                          --------->ALFIN1                         <------NtERF2                         <---------ABI4(1)                         <---------At4g35610                         --------->ATERF1(1)                         <---------LBD16                         --------->At4g35610                        <---------ATERF1(1)                        <---------RAP2.6(1)                        <---------RRTF1(1)                        <---------ERF1                        <---------DEAR4(2)                        <---------RAP2.3(1)                       <---------ATERF1(2)                       <---------DEAR3(1)                       <---------DREB2C(2)                       <---------RRTF1(2)                       <---------RRTF1(3)                       <---------RAP2.3(3)                       <---------RAP2.3(2)                       <---------RAP2.6(2)                       --------->ATERF1(2)                       --------->ALFIN1                      <------NtERF2                      <---------ABI4(1)                      ------->GAMYB                         --           ------>NtERF2<---------ORA47(2)                  --------------->AtSPL3                 <-           --------->LBD16<---------ANAC46                --------->MYB52(1)<---------ZAT2        <--     --------->ZAT6   --------->ATERF1(1)                 <---------DOF5.7(2)        <----------DOF2 --->ZmHOX2a(2)      <---------RAP2.3(1)             <---------ANAC46       --------->At4g35610   <-- -DOF2   <---------LBD16------>NtERF2            <---------ANAC58           --------->ZAT2<----------DOF2 ---ZmHOX2a(2)       <---------ATERF1(1)         <----------DOF2            <---------At4g35610   --- -----ARR14(2)      <---------DEAR3(1)           <---------ANAC46          <---------ATERF1(1)    --- ---->ARR14(2)<----------DOF2--------->ALFIN1    <---------ANAC58         <---------DEAR3(1)     ----   tccactatcactccggcttttggaggcggcggaggagccgaagggccagtgccttgtgggtaacggtactcatagggctgctgcattcttttctttttcc  12285300        <---------GLK1(2)        --------->ARR14(2)        <---------ARR14(2)  <---------ARR14(2)  --------->ARR14(2) ------------->AGL15                                                   ---------->DOF2 --------------AGL15                                               ----------->GT1 ---------------AGL1                                            <---------MYB52(1) ---------------AGL3                                           --------->LBD16 -------------->AGL2                                          <---------ANAC58     <-------TEIL   --- -------------->AGL3          *TSS    <----------DOF2         <---------ANAC46 <---------TOE2(3) ---- -->ZmHOX2a(1)        <---------MYB52(1)                      <---------ANAC58 <---------TOE1(3)-----   tccaaatatggatactctctctcagttttgttttgatatgcttttttttttgggtctggttatgccgtgaagttaaagtgtaaggttcttagaatttata  12285400      <---------At4g35610      ---------->DOF2      ----------->RAV1(2) <---------------AGL15  ----------->GT1      --------->At4g35610 <----------DOF2      --------->LBD16    <-------TEIL -------->GT1     --------->ARR11(3)          <---------ANAC46   <-----------GT1 ----->DAG2     --------->ARR14(2)           <---------LBD16 --------->AHL20(2)        <---------YAB1 ----->DOF2     <---------ARR14(2)    ---------->DOF2       <---------YAB1 <----------DOF2   aagtaaacatctgcctcgaatatgttgacttttaaaagagaaaagtctacggggataaacttattatatacatttttcttttaaaaattctaatagtttt  12285500                    ---------->DOF2                 <---------AHL20(2)           <---------AHL20(2)           --------->AHL20(2)       <---------CCA1(1)       <---------RVE1(1)      --------->ARR11(3)                                                                 <---------ANAC58      <---------ARR11(3)                                                                 <---------ANAC58      <---------AHL20(1) ----------->GT1                                     ------>ZmHOX2a(1)    <--    ----------->ARR10  <----------ID1                        --------->TOE2(3)   <---------MYB52(1)    <---------TOE2(3)  ----------->GT1         ----------->GT1    <---------ATHB12       <---------ANAC46   taaactaagatatttatatataaaaaggagaaaaaaaaaacaatatgtatggaaataagagaaccctaatcacttgttcctctgttatgttccttgtgac  12285600                                                                 ------->GAMYB                                                                --------->MYB46(3)              --------->ANAC58          ------->MYC3       --------->ANAC55(2)                     <-              --------->ANAC58          <-------MYC3       --------->ANAC46                   <------            ---------->DOF2       <---------ARR14(2)       <---------ANAC55(2)                -------  <---------ANAC55(2)             --------->ARR14(2)       --------->ANAC55(1)                ------- ---------HVH21                  <---------CCA1(2)  --------->AtMYB61                     --------->AHL20(2)   tgtcacttaaacacataagcacacatttcaaaaccatatccacatgtttaaaaaccaaaacacataaccacaagtttgagaaccaaaacacataaatttt  12285700           --------->AHL20(2)           <---------AHL20(2)       --------->AHL20(2)      --------->AHL20(1)      <---------AHL20(1)      <---------ARR11(3)  --------->TOE2(3) ----------GT1                                 --------->TOE2(3)          ----------->GT1 ---AHL20(2)                     --------->AHL20(2)             --------->ATHB12 -->AHL20(2)                     <---------AHL20(2)       <---------ARR11(3)      --------->TOE2(2) -->AHL20(1)        <---------GLK1(2)        ------->TEIL --------->ARR11(3)      --------->TOE1(2)--   ttaaccaaaatatttaaacacaaattcttacaaatttaaattttaagaacctcattagaagttctaccattggactaagtaaaacataagaactcatggg  12285800  Previous    Next  AGI:  At1g33840.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G01750.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO48825.1); contains InterPro domain Protein of unknown function DUF567 (InterPro:IPR007612) Range:  from: 12283842    to: 12285330    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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