Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <----------ID1                                                            <---------MYB59                                            ---------->DOF2--------->ANAC46           --------->TOE2(3)     --------->ICU4          <-----------GT1   ----------->GT1               <---------ATHB51<----------DOF2 ---------->DOF2    ----------->GT1   tggtttagttaaaccacaaattggacacccttgaaattatgcaaatgaaagctttttttataccgaataaagacaaacaaatggtgatgttaattcgttt  12261000               --------->LBD16              <---------HSFC1(1)              --------->HSFB2a(2)              --------->HSFC1(1)                                                                <----              <---------HSFB2a(2)                                                               <----        <---------YAB1                                                                          <----      <---------ICU4                                                                            <----      --------->ATHB51                                                                  -------->P      --------->ATHB12                                                                 ------->GAMYB      -------->ATHB1                                                                  <---------MYB55(2)     <---------AHL20(2)                                                               <---------MYB46(2)     <---------ATHB51                                              --------->ANAC46   <---------MYB52(2)     --------->ICU4                                   ----------->GT1                 --------->MYB46(3)     <---------YAB1             --------->DAG2        <---------MYB46(3)    ---------->DOF2   <------     --------->AHL20(1)        ---------->DOF2       <--------P    --------->ANAC58   <---------MYB111(1)   --------->YAB1    ---------->DOF2----------->GT1 <-------GAMYB  --------->ANAC58   <---------MYB111(2)   gacaaaaattattgttccagaaacaaagaaccaaaaagttgttaaatcaacttgggttgtttaaaatacaaggaaacacaaagttgcaactaccatgttg  12261100                                                                                            <--------                                                                                         <---------ANAC55(2)                                                                --------->YAB1           <---------ANAC58       <-----------GT1                                 --------->ANAC58                  <---------ANAC58  <----------DOF2                                      --------->ANAC46                  <---------ANAC55(1) -----MYB46(3)  <---------ANAC58                <---------------AGL15                    --------->ANAC55(2) -----DEAR3(2)  <---------ANAC46           <<<<<<<<<TBF1 --------->YAB1     --------->GLK1(1) --MYB46(1)     <---------ANAC58      <---------GLK1(2)--------->ANAC58     <---------GLK1(1) <------ --MYB83   ----------->RAV1(2)     --------->YAB1 <----------DOF2       --------->YAB1<---------MYB52(1) --P  <-----------GT1       <------ZmHOX2a(2)   =====================================================   gttcctttttaacacctgtcttgtttttggatcactatcaaattcttcttctctttcaagcatcaattttaaaatcagaaatctctccattacgtttcac  12261200                       <---------ICU4                      <---------AHL20(2)                      --------->AHL20(2)                      --------->AHL20(1)                   --------->AHL20(2)               ------->TEIL        <---------At5g28300 <---------YAB1                                          <-----------RAV1(1)       --------->YAB1 <---------AHL20(1)                                       ------>MYB83 ---HVH21   <---------YAB1<-----------GT1                                      ------>MYB46(1) -----GT1 --------------->AGL15                                        <---------ICU4 =========================MADS_MADS   <---------YAB1                   --------->YAB1<-------GAMYB   atcttccaattaccatgaatataaaatattactatacaatatgaaaaaaaacaattagttagtatatgtgtattcatcaccaacttctgttgtattggaa  12261300                                                --------->ANAC58                                           <--------ATHB1                                      ------                                           --------->ATHB12                              --------->YAB1                                           <---------ICU4                            --------->ICU4                                           --------->YAB1                          --------->YAB1                                          --------->ICU4                           <--------HAHB4                                          <---------YAB1                           <---------ICU4                <----------DOF2           <---------ATHB12                        <---------YAB1               <---------ANAC58       ------>ZmHOX2a(1)                           <---------ATHB12       --------->TOE1(3)              ------------>CBF--------->ARR14(2)          --------->ICU4<XXXX       --------->TOE2(3)     ------>ZmHOX2a(1)  --------->ANAC58       <-----------GT1  <---------YAB1     -------->P<---------ANAC58      --------->TOE2(3)<---------ARR14(2)        --------->YAB1 <-----  --------->At4g35610     ------>ZmHOX2a(1)<------------ATHB5      --------->AHL20(2)<---------YAB1*TSS   gaacagcaaccttagtagctttcatgtcctcctcaacttcctcaatgattaagccataacctctctatattatatacacttctcatcattatcaaaacat  12261400            --------->AGP1                                         --------->ARR14(2)       --------->YAB1                                              <-----------ARR10  ------>ZmHOX2a(1)                                                <---------ARR14(2)  ==================HOX2a_HOX2a                                   <---------CCA1(2) --------->TOE2(3)                                                ------>MYB46(1)                   - --->ARR11(3)                             <----------DOF2         ------>MYB83                      - XXXXXXXXXXXXXXXXMIR419     ----------->GT1      ----------->GT1<---------MYB59                    <- ----ARR11(3)<------ZmHOX2a(2)        <---------GLK1(2)      <------ZmHOX2a(1)              <--------   cttcctcattcatagatccaaaaacccaaatcgaaaaatcgattctttagtcagaaaaaatgaggaccaaatctccatcttctcttaatctcaaggtcat  12261500          ==================HOX2a_HOX2a         --------->TOE2(3)      <---------ARR14(2)      --------->ARR14(2)   <---------TOE2(2)       <---------ICU4           <---------ARR11(3)   <---------TOE1(2) ------>ZmHOX2a(2)              --------->ARR11(3)      <---------ARR14(2) -------->YAB1     <---------ARR11(3)         <------ZmHOX2a(2)             --------->ARR14(2) -------->ATHB12   --------->ARR11(3)         =========================HOX2a_HOX2a ------TEIL    --------->YAB1                --------->ARR11(3)      ---------->DOF2 -ARR11(3)------>ZmHOX2a(1)--------->YAB1    <---------ARR11(3) ------>ZmHOX2a(1)        <-----------ARR10   attcataggttcctcaatcttgatcttgatcatcatctacttagcaagatcaaacatctcttcttcctcttcaaagccaatctccaaaacaaatctctcc  12261600                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                         <-------TEIL                                                                              --------->At4g35610                                                                       ==============================                                         ----------->RAV1(1)       <---------DAG2<-------TEIL <------                                 --------->GLK1(1)      ---------->DOF2<----------DOF2<---------MYB46(3)       >>>>>>>>>TBF1           <------ZmHOX2a(1)    <---------ZAT18==================================    >>>>>>>>>TBF1--------->At4g35610    --------->MYB46(3)         <----------DOF2-------------------   caagaagaagaagaaactcagcataaacaagaaggatgtccaacaacacaacaatgcacaaagatgccactttctttatccgatgcattggttcattacg  12261700        <-----------TGA1        <-----------HVH21       --------->ANAC55(2)       --------->ANAC58       <---------ANAC55(2)       --------->O2       <---------O2       --------->ANAC58       ======================MYC_MYB       --------->bZIP60(2)       --------->bZIP60(1)       <---------bZIP60(1)       --------->TGA1a       ==================================================bZIP_DOF     <-----------GT1 -------HVH21 -------TGA1 ----bZIP60(1) --->bZIP60(1) --->TGA2(1) ----ANAC55(2) --->ANAC46          ------->GAMYB --->ANAC55(2)      <---------MYB52(2) ----TGA2(1)        --------->MYB46(3) ----ANAC58       ----------->RAV1(1)                                                            ---- --->ANAC58   --------->ZAT14                                                                 <------ --->ANAC58 --------->ANAC46                                                                  <------ ----ANAC58 --------->ANAC58                                                             <----------DOF2 ================bZIP_DOF                                                                ============ -----STF1  --------->ANAC58                                                       <---------ANAC58 ================bZIP_DOF                                                          <---------ANAC58<- ---->TaNAC69(2) --------->ANAC46             ---------->DOF2                <-----------GT1  <------   tcactagtaacgtcactccacaacaaacatttgatgaagtctctgtctcaaagagagtcttggacaagaagtctccttgtaacttccttgtctttggctt  12261800   <---------TGA1a                                                                           <-------   --------->ANAC46                                                               ===================   --------->ANAC58                                                               ------>ZmHOX2a(2)   <---------O2                                                                  <------ZmHOX2a(2)   --------->TGA1a                                                              --------->ARR14(2)   --------->O2                                                                 <---------ARR14(2)   --------->ANAC58                                  <---------ZAT14            <---------ARR11(3)   <---------bZIP60(1)                     ------->TEIL                         --------->ARR11(3) ----->MYB59                             <---------SPL7            ------>ZmHOX2a(1)   --------->YAB1 ---ANAC46                             <---------------AtSPL3      =====================HOX2a_HOX2a ---ANAC58    <-----------RAV1(1)      --------------->AtSPL8      ======================HOX2a_HOX2a ============bZIP_DOF <---------CCA1(2)--------------->AtSPL3  <-----------GT1  --------->AGP1      - ----------HVH21--------->ALFIN1     <---------MYB46(3)    <---------MYB52(1)   <---------AGP1      < ---ANAC58   <---------TOE2(3)      <---------AtMYB61--------->ZAT14            <-----------ARR10<---   aggtcacgacagtttaatgtgggcatctcttaaccatggtggtcgtacctgtaagtactctgttttttcctctgtttcaacagatctaatgaaaactttc  12261900  Previous    Next  AGI:  At1g33800.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G09990.1); similar to unknown [Populus trichocarpa] (GB:ABK93991.1); contains InterPro domain Protein of unknown function DUF579, plant (InterPro:IPR006514) Range:  from: 12261399    to: 12262697    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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