Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->AHL20(1)            ------>MYB46(1)            ------>MYB83          <---------MYB59       <-----------GT1<---------AHL20(2)      --------->KAN4(2)               --------->bZIP60(2)     <---------KAN4(1)--------->ARR11(3)     <----------TaMYB80<---------AHL20(2)                                                         ---     --------->KAN4(1)<---------ARR11(3)        <---------ANAC46                                  <--    ---------->TaMYB80--------->AHL20(2)        <---------ANAC58                            ---------    <---------KAN4(2) <---------AHL20(1)        <---------ANAC58        <-----------GT1   <---------ANAC46   gcccagaatataccaaatatgaaatatatttatcaaggccatgtcaattttcttggaaggcatgtacaaagtttttactgaaaacatatttgatgtgtaa  12237500             --------->AHL20(2)             <---------AHL20(2)            <---------AHL20(2)            --------->AHL20(2)                                    --------->YAB1        --------->HSFB2a(2)                                       --------->AHL20(2) --------->ARR11(3)                                             --------->AHL20(1) <---------ARR11(3)                                             --------->AHL20(2) <---------AHL20(1)                                            --------->YAB1                      -- --------->AHL20(1)               <---------AHL20(2)         --------->AHL20(2)       <----------DOF2 ------>AHL20(2)                  --------->AHL20(2)     --------->YAB1     --------->YAB1       ---- -------AHL20(2)              --------->YAB1            <---------ATHB12   <---------ATHB12      ---- -->GT1 <---------HSFB2a(2)  <---------ATHB12         --------->WOX13(1) --------->WOX13(1)      ----   aaaaatatttctaaaaaaatttagaacccaaatcatataaatatcaaacttgtcttcaatcaaaaaaataatattcaatcagcgttttctttcaaataca  12237600    --------->ANAC46         <---------ZAT2   ------->GAMYB --------->ANAC46                                                                <---  <---------ALFIN1    ---------->DOF2                                          ----------->HVH21 ---- --------->ZAT14 --------->ANAC58                                            <---------AtLEC2  ------ ------->ANAC46  --------->ANAC58                                       <<<<<<<<<<ABI3         ------ ----->ANAC58 <---------ZAT18--------->At4g35610                        >>>>>>>>>>FUS3    <---------- ----->ANAC58 --------->ZAT14<---------At4g35610    --------->AtLEC2    <<<<<<<<<<FUS3  --------->ARR14(2) ----->ANAC46 <---------REM1(2)<----------DOF2 <---------ARR11(3)      --------->AtLEC2 <---------ARR14(2)   cacaacacactatttgtacacgcttaaagacagctttgctaatgtacaatatccatgtaagtaatagagacccatgcatgcatgacagcatatttccact  12237700                            ----------->RAV1(2)                            --------->At4g35610                       --------->ANAC46  --------->ANAC58     ============================bZIP_DOF  --------->ANAC55(1)  --------->TGA1a    --------->ANAC46  --------->ANAC46  <---------ZAT18       --------->ANAC58  --------->ANAC58  --------->ZAT18       --------->ANAC58 ------ZAT14      <---------At4g35610   ---------->DOF2                              <-----------GT1 ----->ZAT14      --------->At4g35610  <---------ATHB12                <------------CBF --->ANAC46  <---------TOE2(2)        ------>MYB46(1)                --------->AHL20(2)          ---- --->bZIP60(2) <------ZmHOX2a(1)      ------>MYB83     --------->GLK1(2)        <----------DOF2 <---- -GT1      --------->TOE1(2)<---------At4g35610--------->AtLEC2      <---------AHL20(2)     ---------   tcacaagtaactacgtaggaagctcacttcacctgaaaccaaacaagccatccacaaattctattccctcatttattgtcttctttatttctctatatat  12237800      --------->ANAC55(2)      --------->ANAC46    <-----------GT1                                                                          <------- -------->CBF                                                                      --------->ANAC58 -------GT1                                                                        --------->ANAC58 -->TBP    --------->MYB46(3)                             *TSS                     --------->ANAC46   acaatttcacttaaccactgactctataactcaaaacttctaaactaattcgcacagttctatatacactcacaaacacacacacacacaatatagtgct  12237900                   -------->HAHB4                   <---------ICU4         --------->MYB52(1)                  --------->ICU4         <---------WRKY12                                         <--                  <---------ATHB51   --------->WRKY12          --------->DOF5.7(2)                ---                <---------ICU4       --------->WRKY38(1)      --------->TOE2(3)                  <---               <---------AHL20(2)   <---------MYB52(1)        --------->TOE1(3)                  ====               --------->AHL20(2) <---------ANAC58      <----------DOF2                          ====     <-----------GT1 <---------TOE2(3)   <---------WRKY38(1)<---------TOE2(3)               <--------  --------->YAB1--------->YAB1    <---------ANAC58 <---------At5g28300                    <---------- --ZAT6        --------->ICU4    <---------TOE2(3)<-----------GT1            ------>ZmHOX2a(1)<------NtERF2   actaaaataaccttgtattaattatggaaaacacttacgttggccaacgagattaccgcttcaacgttaaccagttgtcctacagaggcattcgtcggag  12238000                              <---------ARR14(2)                              --------->GLK1(2)                          <---------HSFB2a(2)                          --------->LBD16                          --------->HSFB2a(2)                        ------>ZmHOX2a(2)                       --------->CCA1(2)                        --------->CCA1(2)              ------                       <------ZmHOX2a(2)                       --------->TOE1(2)             <-------                      --------->ARR11(3)                      <---------HSFB2a(1)          ------>NtERF2                      <---------ARR14(2)                      <---------HSFC1(2)          --------->RAP2.6(2)                      <---------ARR11(3)                      --------->HSFC1(2)        --------->At4g35610                      --------->ARR14(2)                      <---------At4g35610       <---------At4g35610   <----------ID1    <---------GLK1(1)                        <---------ZAT2            --------->ATERF1(1) --------->ALFIN1    --------->GLK1(1)                        --------->At4g35610    <------NtERF2 -------ARR14(2)    ----------->ARR10 --------->ANAC58       --------->ANAC58        <---------ZAT14- ------>ARR14(2) <---------ANAC46     --------->ANAC58       --------->ANAC58        --------->At4g35610 ---ZmHOX2a(1) <---------ARR14(2)  <---------MYB52(1)  <---------ANAC58              <---------At4g35610 =============================HOX2a_HOX2a              <---------ANAC58              <---------ZAT2 < ==============================HOX2a_HOX2a             <---------ANAC46     <------NtERF2--------->ATERF1(1) -DEAR3(1)     --------->ARR14(2) --------->LBD16<---------ARR14(2)    <---------RAP2.6(2)<---------ZAT18 -HVH21       <---------GLK1(1) <---------LBD16  --------->ARR14(2)   --------->RAP2.6(3)--------->DEAR3(1)   gaaatggggcaaatgggtatcggagatccgagaacccggtaagaaaacaaggatttggcttggaagctacgagacggccgagatggctgcagcggcctac  12238100                             <---------PCF2                             <---------PCF5                             --------->TCP20                             --------->TCP15(1)                          --------->ALFIN1                         ------->PIF5                        <---------bZIP60(2)                        <---------TGA1a                        <---------ANAC58                        <---------ANAC46                ----------->HVH21                     ----------->HVH21                  --------->ETT(2)       --------->ARR14(2)<-------PIF5             --------->GLK1(1)       <---------ARR14(2)--------->TOE1(2)       --------->ARR14(2)     <---------RAP2.3(1)<---------O2           --------->LBD16     ------>NtERF2 <---------HSFB2a(2)        --------->ANAC46                  --------->ARR11(3)    <---------RAP2.3(2) =============================bZIP_DOF               ---------->DOF2    <---------DEAR3(1)  <---------ANAC58      --------->HSFB2a(2)          <------NtERF2   <---------LBD16 --------->HSFB2a(2)        --------->ANAC55(2)         <------NtERF2   <---------At4g35610<------ZmHOX2a(1)      <---------LBD16              --------->LBD16 --->SPL7          --------->LBD16------>MYB83<---------HSFB2a(2)        --------->RAP2.6(2) --SPL7<-----------ARR10--------->TGA1a   <----------DOF2              ------>NtERF2 -------->ZAT2    <---------TOE1(1) --------->TOE2(3)   <---------ETT(2)<---------LBD16 ---------ZAT2 --------->DEAR3(1) ------>MYB46(1)<---------ARR14(2) ------>ZmHOX2a(1)              --   gatgctgcggctcttcacctccgaggacgtgggaccaatctcaactttccggaactcgtcgacagttttcctcggccggaaagctctagttcggagcaca  12238200                                                        <---------At4g35610                                               <---------ANAC58                                               <---------ANAC58                                               <---------ANAC46                                          <------MYB46(1)                                          <------MYB83  --------->At4g35610                >>>>>>>>>ARR2                                         --------->MYB59--------->ZAT2                     >>>>>>>>>ARR1                    <---------At4g35610  --------->MYB46(2)                       --------->HSFB2a(2)        <------NtERF2<---------ALFIN1    <---------AtMYB61                    <----------DOF2       -        --------->ZAT18                 <---------MYB55(1)                 <------ZmHOX2a(1)      <--        <---------ZAT14                 <--------P--------->ZAT18          ==========================        --------->At4g35610            <---------MYB52(1)              <---------WRKY12    >>>>>>>>>ARR1     --------->At4g35610            <-----------RAV1(2) <---------ZAT2 <---------WRKY38(1) >>>>>>>>>ARR2     <---------At4g35610   <---------YAB1--------->MYB111(1)          --------->WRKY18(1) <------ZmHOX2a(1) -------->DOF2   <-------TEIL    <-----------GT1  <---------ZAT14    <-----------HVH21    ===========   ttcaagcggctgcacaagatgcagcacttatgtttaaaccaggtaggttgagtgaaccagctctcgagtctggtcaaggactttctcgagtaggattgtc  12238300                                                     <---------MYB46(3)            --------->ANAC46                        --------->ALFIN1         <-------TEIL                             <---------ANAC58   <------ZmHOX2a(2)                              <---------ANAC46  <---------ARR14(2)                              <---------ANAC58  --------->ARR14(2)                           --------->ALFIN1          <---------At4g35610 -------->LBD16                              <------ZmHOX2a(1)           --------->At4g35610 -------LBD16                             ------>NtERF2       --------->ARR14(2) =========HOX2a_HOX2a                     --------->LBD16     <---------ARR14(2)            <-------- =========HOX2a_HOX2a                    --------->DEAR3(1)  <------ZmHOX2a(1)           --------->YAB1   tccggatcagattcaagcgattaatgagtctccattagactcgccgaggatggggtggatgcaggatttggaagttgctgactacgaagaattatacgga  12238400  Previous    Next  AGI:  At1g33760.1    Description:  AP2 domain-containing transcription factor, putative. Identical to Ethylene-responsive transcription factor ERF022 (ERF022) [Arabidopsis Thaliana] (GB:Q9LQ28); similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT1G71450.1); similar to TINY-like protein [Populus trichocarpa] (GB:ABQ62982.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 12237858    to: 12238578    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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