Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ANAC58                                                       --------->ANAC46                                                       --------->ANAC58                                                    --------->TOE1(2)                                                    --------->TOE2(2)                                      --------------->AGL15           --------->ANAC58                                      <---------------AGL15           --------->ANAC55(2)                                     ----------------->AG             --------->ANAC58         <---------AHL20(2)          ----------------->AGL1           --------->ANAC55(1)      <---------ARR11(3)       <---------TOE2(3)    --------->TOE2(3) <---------ANAC55(2)      <---------AHL20(1)    <---------MYB52(1)      --------->TOE1(3) --------->ANAC46 --------->GLK1(2)      --------->AHL20(1)   <-------GAMYB    ----------->GT1       <-----------GT1  <------ZmHOX2a(1)   aatgtcaatatataaaaaatcgtttaggcagttaagttttccaaatttgtaaaacctaagccaaagttttacacgtatagaataaggagcatctgttccc  12159500                                                                  --------->MYB46(2)                                                                  --------->MYB55(2)                                                                  --------->MYB52(2)                                                                <---------MYB52(1)                                                               --------->TOE2(3)                                                          --------->MYB46(3)                                                         >>>>>>>>>>MYB80                                                        --------->ANAC46    <-----------GT1                                                    <-----------GT1--------->At4g35610                                                 --------->MYB52(2)<-------GAMYB  <----------DOF2<---                  ------>ZmHOX2a(2)            <---------MYB52(1) <---------MYB46(3)   <-----------GT1   ataaacttgtgtttgtttgatccctattgtttagtctctattactcgacgttatttacaaaccatcgttagttgaatgttacttcttttttactctctag  12159600                                                               --------->ZAT18                   <---                                                               <---------ZAT14                  -----                                                               --------->ZAT14                 <-----                                                     --------->YAB1                           -------                                                     <---------ICU4         ------------>CBF ------->GAMYB                                                    <---------ATHB12    <---------ARR14(2)<----------                          <----------DOF2         ------>MYB46(1)       --------->ARR14(2)--------->MYB52(1)                     ---------->DOF2              ------>MYB83 <---------ZAT18         --------->YAB1 ------ZAT6    --------->DEAR3(1)       ----------->GT1<---------YAB1   <---------KAN4(2) --------->YAB1   tcttaacttgaattaagccgagccaaagctttctaaaatcaaatgtaaaaccaaatcatgaaaactgcacatagaatatgcaatggccttaataacgatc  12159700         --------->LBD16        --------------->AGL15                    <----------DOF2        --------->ANAC46                        --------->TOE2(3)    --------->HSFB2a(1)                         --------------->AGL15    <---------HSFB2a(1)                         <---------------AGL15    <---------GLK1(1)                       <----------DOF2    --------->GLK1(1)                      <---------HSFB2a(1)   ------->TEIL                            <---------HSFC1(2)   --------->ARR14(2)                      --------->HSFC1(2)   --------->GLK1(2)                       --------->HSFB2a(1)                                      <   <---------ARR14(2)                    --------->ARR11(3)                                        <- ------SPL7                          ---------->DOF2                                         <------- ->ZmHOX2a(2)                       <------ZmHOX2a(1)     <----------ID1                  --------->YAB1 -ZmHOX2a(2)           --------->AHL20(2)<---------ARR11(3)                             <-----------TBP -->MYB52(1)   ----------->GT1    <---------TOE2(3)--------->AHL20(2)<----------DOF2  --------->AHL20(2) -GT1   ========================================================MADS_MADS       <-----------HVH21  <-   ggacgaatctccgaaataagaaaaaaaaaatcaaatgaggaaagaactttcctttaaatgaagacaaatttcttttatattctgtcaaatatttataacc  12159800              <----------DOF2        <---------ANAC46        <---------ANAC58      <-----------GT1    <---------AHL20(2)  <---------AHL20(2)                                                                  --------->ZAT18 ---------AHL20(2)                                                                    <---------ZAT18 --------AHL20(1)                                                <---------DAG2--------->GLK1(2) ----GT1<---------ANAC58               <------------CBF          <----------DOF2  <-----------RAV1(1) --------ARR11(3)                    <---------YAB1      ------------>CBF      <---------ARR14(2) ---   atatattttttcgtgtctttgtaatattctgctctagttgttattgcaaacttcatcaaaacaatgactttttcaattgagaaactggtggacttgaaga  12159900                                                                                              -------                                                                                              -------                                                                                   <---------ANAC58<-                --------->ZAT2                                    --------->At4g35610         -------                --------->At4g35610                               <---------At4g35610  --------->ANAC58     --------->ALFIN1       ---------->DOF2                     <-----------GT1    <---------ANAC58-- ------->DOF2   <---------At4g35610                    <-----------GT1  <----------DOF2--------->ANAC58   gaaagaagtggcagtcgaagctccaaaatacaaagaaacaggttttaggccgatgtttaacaaattttagcagacttttgagttttcgtaagaaacaaga  12160000                                                                                                -----                                                                                     --------->ANAC46         --------->DAG2                                                              <---------ANAC58        ---------->DOF2                                                              --------->ANAC55(2)   --------->ANAC58                                                                  <---------ANAC55(2)   --------->ANAC58                       <---------MYB46(3)                         --------->ANAC55(1) --------->MYB52(1)             --------->ANAC58         ------->GAMYB               <---------ANAC58 -->ANAC46                      --------->ANAC58        --------->MYB46(3)          <---------TOE2(3) -->ANAC58                 --------->ANAC58             <---------MYB55(2)         <-----------GT1--- --------MYB52(2)          --------->ANAC58         --------->MYB46(3)     --------->ICU4       ----- -->ANAC58               ---------->DOF2<-------GAMYB ----------->RAV1(1)  <---------YAB1--------->ANAC58 ------->MYB46(3)  <---------REM1(1)   <-----------RAV1(1)              --------->ICU4   --------->ANAC58   aacaaacggaaaaagccctagatgtagcaaagccacgcttgctgttgttgttcatccaacagccagtactacacatgatgattttttacgtaagaaacaa  12160100                                                             >>>>>>>ZML2                                                        <---------HSFB2a(1)                                                        --------->HSFB2a(1)                                                       --------->ARR14(2)           --------->DAG2                            --------->LBD16                     ----------->GT1          ---------->DOF2                          <---------LBD16                     <---------LBD16     ----------->GT1 <---------REM1(1)            --------->MYB52(1)                  --------->MYB52(1)    --------->At4g35610                           <---------At5g28300    --------->GLK1(2) ---->ANAC58       --------->ZAT2                <-----------GT1        <---------GLK1(2)--------->LBD16 ------->DOF2      --------->At4g35610     --------->ALFIN1  <---------HSFB2a(2)     <---------SPL7 ---->ANAC58       <---------ZAT2        <---------ANAC46    --------->HSFB2a(2) --------->ANAC46   -   gaaaggagcggaaaaagccctagctgtagcgaaacaacgcttgctgtggagttaccggatgttctagtagaagagattcttcaacgccttccggtgaaat  12160200                                               <---------At4g35610                                          <---------WOX13(1)                                        --------->ATHB12                                  --------->ARR11(3)     <---------YAB1               <---------ARR11(3) ----------->GT1                 <---------GLK1(1)                             --------->At4g35610 <------MYB46(1)           <------ZmHOX2a(1)  ------->TEIL                  <---------MYB52(1) <------MYB83 <---------ATHB12   --------->GLK1(1)                   --------->ARR11(3)  --------->DAG2 -------->MYB59        ---------->DOF2 <---------YAB1                <---------ARR11(3) ---------->DOF2   atttggtaagattgaaatcaatatcaaaaggatggaaatctttgattgaatctgaccatctagcagagaaacatctccgtctgcttgaaaaaaagtatgg  12160300                                                                                           --------->YAB1                                        --------->ANAC58                               --------->YAB1                                        --------->ANAC58                              <---------ATHB12                                       --------->DAG2                            --------->ANAC58                                      ---------->DOF2                            --------->ANAC58                              <---------ALFIN1                                   --------->ANAC46            <---------ICU4   <---------ETT(2)                                   ------->TEIL        <      ----------->GT1        <---------ZAT18                       --------->ANAC58  --------->ANAC58     ----------->GT1    --------->At4g35610                        --------->ANAC46  --------->ANAC58 ---------->DOF2        <---------At4g35610                        --------->ANAC58 --------->WOX13(1)   actcaaagagataaaaatcacagttgagcggtccacatcgaaaagcatttgtatcaagtttttctcaagacgcagtggaatgaacgcaatcaatagtgat  12160400  Previous    Next  AGI:  At1g33530.1    Description:  F-box family protein. Identical to Putative F-box protein At1g33530 [Arabidopsis Thaliana] (GB:Q9C800); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G62380.1); similar to predicted F-box and bHLH containing protein [Overexpression vector pFC12860OE] (GB:ABK41847.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 12159864    to: 12161294    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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