Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           =============HOX2a_HOX2a                                        <------ZmHOX2a(2)                                        ==============HOX2a_HOX2a                                        --------->GLK1(1)                                        <---------GLK1(1)                                       <---------AGP1                                       --------->ARR14(2)                                       --------->AGP1                                       <---------ARR14(2)                                 <---------bZIP60(1)                    --------->YAB1     <---------ARR11(3)                   ===================================HOX2a_HOX2a                   <------ZmHOX2a(2)   <-----------ARR10                  <---------ARR14(2)   --------->ARR11(3)                  --------->ARR14(2)  <---------CCA1(2)       ------>ZmHOX2a(1)         --------->TGA2(1)                              <---------GLK1(2)       ===================HOX2a_HOX2a --------->At4g35610           --------->At4g35610   <---------ARR11(3)            --------->bZIP60(1)                --------->ZAT2                 --   <---------ARR14(2)            <---------TGA2(1)                  <---------At4g35610           ---   --------->ARR14(2) --------->At4g35610------>ZmHOX2a(2)       <---------At4g35610     <---------At4g35610 --ALFIN1 ---------->DOF2     ----------->HVH21------>ZmHOX2a(1) --------->At4g35610<----------DOF2--   ctcaaaatcctccaaagtcggatcatcagcaagtgacatcagatctctcctcaaactctgtaacataagctgctcccccatagatactttccgctcttca  12158500                                                    --------->MYB52(1)                                                    --------->ARR14(2)                                       <---------TOE2(2)                                    <---------ANAC46<---------ARR14(2)                        <------                                 ----------->HVH21--------->At5g28300                    --------->ARR14(2)                             <----------DOF2     --------->TOE1(3)                       <---------ARR14(2)      --------->MYB46(3)     <---------DAG2   <-----------GT1                       ---------->DOF2 ----->GAMYB            ------>ZmHOX2a(1)   <---------AHL20(2)                 --------------->AGL15 ------>MYB46(3)       --------->TOE2(3) <---------ARR14(2)                    <-----------RAV1(2) ------->RAP2.6(2) --------->YAB1----------->TGA1--------->TOE2(3)            <---------TOE1(1)   accgcatcaccaccaattgaatcatccttcactttctgacgcagatttaaaccgtaactgatattatcaggtttctcagtaccaggtaaaggaacctcag  12158600                  --------->TOE2(2)                  --------->TOE1(2)                 <---------HSFC1(2)                 --------->HSFC1(2)                 <---------HSFB2a(1)                 ----------->RAV1(2)                 --------->HSFB2a(1)               --------->ARR14(2)               <---------ARR14(2)            <---------HSFB2a(2)            --------->HSFB2a(2)                                                                    <-           <---------LBD16                       <---------GLK1(2)                                <--   <---------ARR14(2)                      <---------ARR14(2)                                    ----   --------->ARR14(2)                    <-------TEIL                                        <------ZmHOX2a(1) -----RAV1(2)--------->LBD16            <--------P--------->GLK1(2)               --------->TOE2(3)--   gctcgaattcgagtccggaacctgcgttaccagattgaagaggtagatcgagattcttcatcttcttgtgaggtctccatgtattctcaatcggaggaat  12158700                                                                                                    <                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             ------>NtERF2                                                                                            <--------                                                                                          <----------                                                                                       <---------DOF5.7(2)                                                                                       <---------At5g28300                                                                                      <-----------GT1      <---------LBD16                                                            <-------GAMYB<------NtERF2  ------->TEIL                                                                  <---------ANAC46<----  <---------ARR14(2)                                                            <---------DEAR3(1)---  --------->ARR14(2)                                                           <------NtERF2<-------- --------ANAC55(2)                             ----------->HVH21              ------>NtERF2 <-------- -------TOE2(3)                          --------->ARR14(2)                  --------->ANAC46<------- ----->MYB52(1)                          <---------ARR14(2)<-----------GT1   <---------DEAR3(1)<----- ------->ANAC55(2) <---------STY1(2)  ------>ZmHOX2a(2)  <----------DOF2  ----------->HVH21 <--------   aacgtatttggggatggaattagctagggttttcgatggatcgaattcggtgacgaactctttactagttccatcatcgacggcgttgttaccgtcggcg  12158800 <--------P -------GAMYB ------->ABI4(2) ------->MYB55(2) ------->MYB52(2) --------MYB46(3) -------AtMYB61 ----GAMYB ---NtERF2 ----DEAR3(1) ---ABI4(1) -->ATERF1(1) --ORA47(2) --DEAR3(2) --RAP2.3(1) -DREB2C(2)                                               ------->TEIL -HVH21                                              <---------ICU4                                 - -----MYB46(3)                                      --------->ICU4                                  - ------>ALFIN1                                      <---------YAB1                                  - -At1g77200                                      <-------TEIL ------>ZmHOX2a(1)                 <---- -RAP2.3(3)                                   --------->At4g35610                              ------ --ERF1----------->HVH21                     <---------ARR11(3)                                ------ ----DREB2C(2)                               --------->ARR11(3)                     --------->ANAC58- -DEAR3(1) <----------DOF2             ---------->DOF2 <---------YAB1               --------->ANAC58-   gtggttgctgtgactttgggcttagatttagaagggagagagaaagagagcttcatgatgaatccttctcttctcttctctctcacacgaacaatagccg  12158900                                                   <---------ANAC58                                                   <---------ANAC46                                                   <---------ANAC58                                                  --------->ABI4(2)                                                  ------>NtERF2                                               <---------ANAC58                                               <---------ANAC58                                              <---------DEAR3(1)                                             <-------TEIL                                            --------->CCA1(2)             --------->At5g28300            --------->GLK1(2)     <---------ANAC46                       --------->ARR14(1)                               <-------    <---------LBD16                        <---------ARR14(2)                              -------->ATHB1   --------->MYB52(1)                      <---------GLK1(2)                               <---------ICU4  ----------->HVH21                        --------->ARR11(1)                              --------->ATHB51 <-----------TGA1                          --------->ARR14(2)                              --------->ATHB12 <-----------HVH21                        --------->HSFB2a(1)                             --------->AHL20(2) -------->O2----------->GT1               <---------HSFB2a(1)                             <---------AHL20(2) -------->ANAC58                          --------->GLK1(1)                               --------->ICU4 -------->bZIP60(2)                       <---------GLK1(1)                               <---------ATHB51 -----RAP2.6(3)           ----------->GT1----------->ARR10                             --------->AHL20(2) --->ANAC46<---------DEAR3(1)           <------NtERF2                                  <---------AHL20(2) --->RAP2.6(2)     --------->GLK1(2)   --------->LBD16                             <----------DOF2 -------->ANAC46  <---------GLK1(2)   --------->DEAR3(1)                   --------->At4g35610 -------->ANAC58----------->ARR10*TSS<---------LBD16  <---------ZAT14---------->DOF2  --------->AHL20(2)   aaacgtcacggagacggtgagaatcgcaaggttaaactcgccggagattcggtgcctgtagtagataaatgtaaagcagatgggccttttaaattattag  12159000                              ----------->TBP                        <---------RAP2.6(3)                        --------->ORA47(1)                        ------>NtERF2                       ----------->HVH21                           <------MYB83                       --------->DEAR3(1)                          <------MYB46(1)           --------               <---------ARR14(2)             ----------------->AGL2              <---------AHL20(2)    ----------->GT1   --------->DEAR3(2)      ----------------->AGL3<-----------HVH21      <--------- <------ZmHOX2a(1)    --------->ATERF1(1) --------->MYB59         <---------MYB46(3)    <---------GLK1(2) --YAB1        --------->ARR14(2)       <---------MYB52(1)        --------->MYB59--------->AHL20(2) -   tgaggaatgttaacaagtatatgggccgacctatataacacagttaggcccatattcagaaatggagttgggtcacaagaatataaaatggattatccaa  12159100                                                                ----------->GT1            --------->GLK1(2)                            <-----------GT1                  <---------DAG2  <---------TCP16(1)                                    <---------AHL20(2)       <---------ATHB51 --------->AGL1      <---------MYB52(1)            <---------YAB1   <---------AHL20(2)    <----------DOF2 --GT1  --------->YAB1                      <-----------GT1  <----------DOF2     --------->ICU4<----- -------->LBD16  <---------MYB52(1)   --------->LBD16   --------->AHL20(2)--------->At4g35610 <------   accgggtccaaaataatccgtctgttttgtctattttctccgagtttttcattactatttaaacttttgttaaatttgctgaaattattcaactttttta  12159200                                                                     --------->ZAT14                                                                     <---------ZAT18                                                           <---------ICU4                                                           --------->ATHB12                                                           --------->ATHB51                                                          --------->ICU4                   <---------AHL20(2)                     <---------YAB1                  <---------AHL20(2)                    --------->YAB1                  --------->AHL20(1)                   <---------YAB1<---------ZAT14     <---------ARR11(3)                               --------->ARR11(3)    ----------->GT1     --------->ARR11(3)                               <---------ARR11(3)  --------->ZAT14           -     --------->GLK1(2)                              <---------YAB1 <---------ZAT14            ------- ----AHL20(2)     <---------AHL20(1)             ------->TEIL<---------WOX13(1)     --------->TOE2(3) ---AHL20(2)      --------->AHL20(2)  ---------->DOF2--------->YAB1--------->ZAT14  --------->TOE1(3)   ttttcaaaatctagttcaaatttattagttttaagcgttggaaagtgaatgaatatgatcataattgactgtgctcttcagtaaaaccttcaatccaaaa  12159300                         ---------->DOF2    ------->TEIL        <-----------GT1     ---------->DOF2   <---------YAB1   <-------TEIL     --------->YAB1 ---------->GT1 <---------TOE2(3)       ------->TEIL    <---------YAB1  <-----------GT1 --->DOF2    --------->ICU4         <---------------AtSPL3   --------->YAB1   gagggtttaaaggtcattaagaaatattaaaggccctaaatgtacgtatatatgaactatcaatattcactatatcacggtttttctaagtttgatgaaa  12159400  Previous    Next  AGI:  At1g33520.1    Description:  MOS2 (MODIFIER OF SNC1, 2); RNA binding / nucleic acid binding / protein binding. Identical to Protein MOS2 (MOS2) [Arabidopsis Thaliana] (GB:Q9C801); similar to KOW domain-containing protein / D111/G-patch domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G25020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45656.1); contains InterPro domain KOW (InterPro:IPR005824); contains InterPro domain D111/G-patch; (InterPro:IPR000467) Range:  from: 12157136    to: 12158933    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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