Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           ----------->GT1                  <-----------HVH21                                 XXXXXXXXXXXXXXXXXXXXX>MIR777                 <---------ANAC58                                <<<<<<<GRF7                 <---------ANAC58                              ----------->HVH21                 <---------ANAC46                            ----------->RAV1(2)                <------NtERF2                               ------>MYB83              <---------DEAR3(1)                            ------>MYB46(1)             --------->SPL7                               --------->AtMYB61            --------->MYB52(1)                            <---------ALFIN1                          -           ----------->HVH21                              --------->DEAR3(1)                        -          --------->MYB46(3)    ---------->DOF2          --------->MYB46(3)         <----------DOF2 -        ----------->RAV1(1) ---------->DOF2            --------->YAB1       --------->AHL20(2)   ----   acgtagacaacaccagacggcgtgagagagtaaagaaagtagacaagacgaccactatcaccaccctgacacattcaatttcatagctttcaagttcaac  12118400                   --------->CCA1(2)                                     ---------->DOF2                   <------ZmHOX2a(2)                                 --------->ANAC58                  --------->ARR11(3)                               ---------->DOF2                  <---------ARR14(2)             ------->TEIL --------->ARR14(2) -------->ANAC58  <---------ARR11(3)   --------->At5g28300    <---------ARR14(2)                  --- -------->ANAC46  --------->AGP1--------->At4g35610        <---------ANAC46     ---------->DOF2   --- -------->ANAC58  --------->ARR14(2)  ----------->GT1   <---------DEAR3(1)  <----------ID1        --- --->GAMYB    ---------->DOF2   <---------At4g35610--------->TOE2(3) --------->ANAC58        --------   acacacaaacaaaactaaaagatccaaaaaatgcagaagacagtgaaatcgaacctcatcggcgtatacaaaagcaaaaggagaaagagtctgagcaaag  12118500           --------------->AGL15           <---------------AGL15           ------>ZmHOX2a(1)          <-----------------AGL3   --------->ANAC58              --------->At4g35610   --------->ANAC58              --------->ZAT2 ---------->DOF2                 <---------ZAT2                                           ---------->DOF2 ------>ANAC58        <---------ARR14(2)<---------At4g35610                             --------->ANAC58 ------>ANAC46       --------->GLK1(1)  <---------ZAT2                                  --------->ANAC58 ------>ANAC58       <---------GLK1(1)  --------->At4g35610                           --------->MYB52(1) -->DOF2  <-----------------AGL2 <---------At4g35610                          <---------GLK1(2)  <---   acgaaacgcagtcctgttattggaaatccagacttagctgagagctgaagaagctcgagagcatttggactcgtcttgttgattctccaaacgaaagaga  12118600        --------->LBD16    --------->ARR14(2)    <---------ARR14(2)  <---------HSFB2a(1)  --------->HSFB2a(1)  --------->HSFC1(2)                            <---------ZAT2  <---------HSFC1(2)                            <---------At4g35610 <---------TOE1(2)                              --------->ZAT2                            --------->HSFB2a(2) <---------TOE2(2)                       ---------->DOF2                --------------->AGL15 ---ZmHOX2a(2)    --------->AGP1<---------ZAT6  --------->At4g35610 ------>ZmHOX2a(1)     <---------HSFB2a(2)   tcgaaggttccccaattacagagctagaagcgtagtcttcagacaaaggaagctgaacacactcattgtcctcacttgaattagcaccgatactagaaga  12118700                                                          <---------At4g35610                                                       <------NtERF2                                                      <---------ATERF1(1)                                                      ------>NtERF2                                                      --------->ANAC58                                                     --------->RAP2.6(2)                                                     --------->DEAR3(1)                                                     --------->RAP2.3(2)                                                     --------->RAP2.3(3)                                                     <---------ATERF1(2)                                                     --------->DREB2C(2)                                                     --------->RRTF1(2)                                                     --------->ATERF1(2)                                                    --------->RRTF1(1)                                                    --------->ATERF1(1)                                                    --------->ERF1                                                    --------->ORA47(2)                                                    <------NtERF2                                                    <---------LBD16                                                   --------->ABI4(1)                                                   ------>NtERF2                                                   <---------ATERF1(1)                                                  --------->RRTF1(2)                                                  --------->RAP2.3(3)                                                  --------->RRTF1(3)                                                  --------->ATERF1(2)                                                  <---------DEAR3(1)                                                  --------->DEAR3(1)                                                  <---------ATERF1(2)                                                  --------->RAP2.3(2)                                                 --------->RAP2.3(1)                                                 --------->ORA47(2)                                                 --------->ERF1                                                 --------->DEAR4(2)                                                 --------->ATERF1(1)                                                 --------->RRTF1(1)                                                 --------->RAP2.6(1)                                                --------->LBD16                                                --------->At4g35610                 <---------GLK1(2)                                                <---------At4g35610                 --------->ARR14(2)                                                <---------ATERF1(1)             <------NtERF2                                                ------>NtERF2                  ------>NtERF2                                                <---------RAP2.3(1)            <---------ATERF1(1)                                               --------->ANAC46                --------->MYB52(1)                                    <-----------GT1<---------RAP2.3(1)        ----------->HVH21                        --------->TOE2(3)     <---------LBD16                 --------->DEAR3(1)                      <---------ARR11(3)    <---------ARR14(2)               --------->SPL7                      --------->ARR11(3)    --------->ARR14(2)             <---------SPL7                     <---------GLK1(1)     <---------GLK1(1)   --------->ARR14(2)   <---------ARR14(2)                     <---------RVE1(1)<---------bZIP60(1) --------->At4g35610--------->DEAR3(2)                     --------->GLK1(1)--------->ETT(2)--------->ANAC58    <---------RAP2.6(2)       -                    --------->ARR11(3)--------->ANAC46--------->LBD16    --------->RAP2.6(3) --------         --------->ALFIN1          ----------->HVH21--------->RAP2.3(1)  --------->DEAR3(2)  <-------      --------->DAG2<---------ARR11(3)--------->bZIP60(1) <---------ZAT2--------->MYB52(1)   <-------   tgaaacagaaggtgaaggaacagatatctcaatccatttgacgacatttccgccgccggcaactggaacttccataccggccgacggattccgacgattc  12118800                                                                                   --------->ATHB12                                                                                  <---------AHL20(2)                                                                                  <---------YAB1                                                                           ------>ZmHOX2a(2)                                                                          <------ZmHOX2a(2)                                                                         --------->ARR14(2)                                                               <---------TOE2(3)<---------ICU4    ---                                                              ---------->DOF2  --------->ICU4     ---                                                      --------->ATHB12   --------->AGP1          <---                                                      <---------ICU4     <---------ARR11(3)     -----                                                     <---------YAB1      <---------ARR14(2)     -----                                                     <---------ATHB12    <-----------ARR10     ------ ----->ZmHOX2a(1) --------->TOE1(3)                  --------->ICU4      --------->ARR11(3)    ------ ->ARR14(2)       --------->TOE2(3) --------->ZAT14 <---------TOE2(3)    <---------AGP1        <----- --ARR14(2)     ------->TEIL     <<<<<<<<<TBF1    <---------AHL20(2)    <---------CCA1(2)    -------- --GLK1(2) <----------DOF2 <----------DOF2        --------->AHL20(2)  --------->YAB1<------------CBF   tcctccatttcttctttgaaccctaaacccttttcttcttcactcggacgaattaatgattttttaaagtaatcagatctaatttttattgggcctagat  12118900        <---------TOE2(3) <-----------------AGL1 ------>ANAC58 ------>ANAC58 ----TEIL                                    <---------TOE2(3)     --------->YAB1 ---->CCA1(2)                               --------->MYB52(1)     <---------ICU4 ---->ARR14(1)                              <-----------GT1    >>>>>>>>>GT-1 --->ARR11(1)                        --------->MYB52(1)     <---------MYB46(3)          --------->ARR11(3) --->ARR14(2)                        ------>MYB46(1)        ----------->GT1    --------->LBD16 ----ARR14(2)     <---------ANAC58   ------>MYB83        <----------DOF2 <----------DOF2<---------ARR11(3) --->ARR10        <---------ANAC58 <---------MYB59    <-----------GT1   *TSS <---------LBD16   <-----   acggcccatttaggcttcgtacttgtgaaactgaaaacctaactattaacgaaatttaactttggttaataatctctttccctgaacaaatgtcttcttg  12119000                 <---------ANAC58                                                 <----------DOF2   --------->DEAR3(1)                                                    <---------O2   ----------->HVH21     <<<<<<<<<TBF1                          ---------->ID1  <---------At4g35610  <---------At4g35610 <<<<<<<<<TBF1                    <<<<<<<<<TBF1   <-----------GT1 ------RAV1(1)   <---------ANAC58         <---------GLK1(2) <----------DOF2   <---------RAP2.6(2)----   ttgcagcgacgatgctattgcttcttcttcttcatcttcttcacgattcttctcttcttcttctttatcgttttcacatggctgcttctagtgccaaaaa  12119100                                         --------->KAN4(2)                                        <---------HSFC1(2)                                        <---------KAN4(1)                               --------->GLK1(2)                              <---------ARR11(3)                              --------->ARR14(2)                              <---------GLK1(2)                              --------->ARR11(3)                              <---------ARR14(2)                             --------->HSFB2a(1)                             <---------HSFC1(2)                        --------->ANAC46--------->HSFC1(2)                      <---------ICU4                        --------->ANAC58--------->HSFB2a(1)                     --------->YAB1                        --------->ANAC58--------->KAN4(1)              <---------ETT(2)                 <---------GLK1(1)      <---------HSFB2a(1)            --------->ETT(2)                 --------->At4g35610   <---------KAN4(2)              <------NtERF2          --------->CCA1(2)  --------->HSFC1(2)                      <---------RAP2.6(3)         --------->ARR11(3)  <---------HSFB2a(1)                     ------>NtERF2                <--         <---------ARR11(3) ----------->ARR10<----------DOF2        <---------ANAC46              <-- ----->ATHB12    <---------At4g35610   <---------TOE1(2)      <---------ATHB12 --------->ICU4 <------   cattggagaaagatactagagctcccaaggaagattcttcgaatgttcttttttcatcaattcaatcttgccgtcgagagaattatggtcttcgagggtt  12119200                                                                                             <-------                                                                                          ------>ZmHOX2a(2)                                                                                    --------->LBD16                                                                                   <---------ANAC46                                                                    <---------TOE2(3)   --------->ARR11(3)                                --------->WOX13(1)                  <---------TOE1(3)   <---------ARR11(3) -------TOE2(3)               <---------ATHB12          <---------LBD16        <---------ANAC58 -------TOE1(3)           <---------RAP2.6(3)           <---------HSFB2a(2)    <---------ANAC58 -GAMYB                  --------->RAP2.6(2)            --------->HSFB2a(2)  <---------YAB1<---------   agggttttcaattcttatgaagacgagccgaaatcaatctgttgaattcgatgattttctcggatgaatgaaggttgtgatgcttccgtcgatctttggt  12119300  Previous    Next  AGI:  At1g33410.1    Description:  SAR1 (SUPPRESSOR OF AUXIN RESISTANCE1). similar to Os02g0142500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045864.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48903.1); contains domain PTHR21286 (PTHR21286) Range:  from: 12109570    to: 12118808    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g33415.1    Description:  other RNA Range:  from: 12118972    to: 12126573    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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