Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------->LBD16                                                                              ------>ZmHOX2a(2)                                                                              <----------------------                                                                            <---------ARR14(2)                                                            --------->GLK1(2)<------ZmHOX2a(2)                                                      ----------->GT1       --------->ARR14(2)                                                     --------->DAG2      ------>ZmHOX2a(2)                                                    ---------->DOF2     <------ZmHOX2a(2)                                 <----------DOF2 --------->ANAC46      <---------ARR14(2)                             <------ZmHOX2a(1)   --------->ANAC58 <---------ARR14(2)       <---------LBD16 ---------->DOF2           --------->ANAC58 --------->ARR14(2)    --------->At4g35610 ---ZmHOX2a(1)       <---------HSFB2a(2)         <---------ANAC55(2)   --------->ARR14(2)  ----------   gaagagagacctggaaacatgttcccaaagaggagctttgagagtagcatcacgaaaagtagaatccatatcggatcggatccgaagaagagctaaagtt  12054100                                                                                          <------NtERF2                                                                                          <-------GAMYB                                                                                          --------->ATERF1(1)                                                                                          <---------At4g35610                                                                                          --------->At4g35610                                                                                          --------->ZAT2                                                                                         ------>NtERF2                                                                                         <---------ATERF1(1)                                                                                         <---------RAP2.3(1)                                                                                         <---------ERF1                                                                                         <---------DEAR3(2)                                                                                         <---------MYB46(3)                                                                                        <---------DEAR3(1)                                                                                        <---------ANAC46                                                                                        <---------RAP2.3(3)                                                                                        <---------ATERF1(2)                                                                                        <---------RAP2.3(2)                                                                                        --------->ATERF1(2)                                                                                        <---------RAP2.6(2)                                                                                       --------->DEAR4(2)                                                                                       --------->ATERF1(1)                                                                                       <------NtERF2                                                                                       ------>NtERF2                                                                                       --------->RAP2.3(1)                                                                                      ------>NtERF2                                                                                      <---------ATERF1(1)                                                                                      <---------RAP2.3(1)                                                                                     <---------DEAR3(1)                                                                                    <---------LBD16                                                                                    --------->LBD16                                                                                    --------->At4g35610                                                       <---------ALFIN1            --------->ANAC46                                                     ------>ZmHOX2a(1)            <---------LBD16                            >>>>>>>>>TBF1         ------>ZmHOX2a(1)           <---------MYB52(1)                   <---------HSFB2a(2)           <---------ALFIN1            <-----------TGA1                   <---------------AGL15       ------>ZmHOX2a(1)            --------->DEAR3(1)                   --------------->AGL15      <---------ALFIN1          --------->MYB46(3)<---------ZAT2                   --------->HSFB2a(2)      ------>ZmHOX2a(1)       ------>ZmHOX2a(1)--------->ANAC46                  <---------LBD16          <xxxxxxxxxxxxxxxxsmallRNA(se3) <---------At5g28300    ---- -TaNAC69(2)   <---------GLK1(1)           <---------ALFIN1  <---------ALFIN1<-----------HVH21------- >DOF2 ------>NtERF2--------->LBD16      ------>ZmHOX2a(1)--------->AtMYB61 --------->DREB2C(2) <----   tcttctctcggccatcgatttcccgatgaagaagaagcacttcctcctcctcctcctccacctccacctcctaatccaccgtcatccgcggcggctgaga  12054200                                                                                     ------>ZmHOX2a(1)                                                                                    <---------ALFIN1                                                                                 --------->AtMYB61                                                                                 <---------ALFIN1                                                          <---------ALFIN1    --------->DEAR3(1)                              --------->ARR11(3)          --------->ANAC46    --------->AtMYB61                              <---------ARR14(3)        ------>ZmHOX2a(1)     <---------ALFIN1       --------->ARR11(3)     <---------ARR11(3)  <---------HSFC1(2)         --------->MYB46(3)       <---------ARR11(3)  <------ZmHOX2a(1)      --------->HSFB2a(1)      <---------ALFIN1 ----->GLK1(2)          <-----------RAV1(2)       --------->HSFC1(2)       --------->DEAR3(1) ---->ARR10            --------->At4g35610        <---------At4g35610      --------->AtMYB61      --- -----GLK1(2)     <---------MYB46(3)          <---------REM1(1)           --------->MYB46(3)    <----   atctcataagctcttctaagttgttagcaggaggtcttgaactaataggtgaagcttcctccacaacttcattaccaccaccacctcctccttgctccat  12054300                                                                                                    -                                                                                                    <                                                                                                  ---                                                                                                 <---                                 <---------ALFIN1                                                ----                               --------->ANAC58                                                ------         <---------YAB1        <---------ALFIN1                                               <------ --------->YAB1                --------->ANAC58                                               ------- ------>WOX13(1)          <---------REM1(2)                              <---------AHL20(2)  <------- -----ATHB12       <----------DOF2        <----------DOF2------>ZmHOX2a(1)                  ---------   caatcttgatgatgtttcaatctttttctacacacacactctctctttctctctagctcctcaatgttttttgatataaatctcataaaaccattgatga  12054400   <---------YAB1 -------->ICU4 ---------YAB1 ------>YAB1                                                                                      --- ------YAB1                                                                                      ---- ----->ICU4                                                                                      <--- --->YAB1                                                                                      ------ ---YAB1                                                                  ---------->DOF2   <------ZmHOX2a(1) -->ICU4                                                               <------ZmHOX2a(1)<---------TOE1(1) --TOE2(3)                    <----------DOF2                     ----------->HVH21     <---------ANAC46 >YAB1          ---------->DOF2                           <------ZmHOX2a(1)        <------ZmHOX2a(1)<   tgatgatgagagaaataagaaagagaagcagtctttttttgtttgtttaaacagcaactaggaggggtctgaaggagaaaggagaggattacgaggatga  12054500                                                                                         <---------ALFIN1                                                                                     <-----------GT1                                                                                <---------ZAT6                                                                               <---------YAB1                                                                              <------------CBF                                                                             --------->ATHB51                                                                             -------->ATHB1                                                                             --------->ATHB12                                                                             <---------ICU4 <--------   <---------WOX13(1)                                                       --------->AHL20(2) ------>YAB1              *TSS                 <---------At4g35610          <---------AHL20(2) ----->ICU4               --------->ANAC58     --------->At4g35610          --------->ICU4------>MYB46(1) ------YAB1               --------->ANAC58   --------->DAG2                 <---------ATHB51<-------- --->YAB1               ---------->DOF2     ---------->DOF2            <---------At4g35610------>MYB83 ---------YAB1---------->DOF2        ----------->GT1             <----------DOF2----------->GT1   ---   tgatgatagatagagagaaagagaatgaaagcaaacaagaagttaataaagctgaagcctcttctaactttgcagcaaattattgttaaacccacttttc  12054600                        <---------AHL20(2)                                                <---------AHL20(2)                        <---------AHL20(1)                                      <---------AHL20(2)                    <------------------------ANAC81                            <---------AHL20(2)                    <---------AHL20(2)                                     <---------AHL20(2)       <                    --------->AHL20(2)              ----------->GT1        --------->AHL20(2)       - --DOF2            <---------AHL20(2)  <----------DOF2    ---------->DOF2 --------->AHL20(2) <------- -DAG2  <----------DOF2 --------->AHL20(2)     --------->AHL20(2)<---------ALFIN1        --------->AHL20(2) ------>ZAT14 <----------DOF2<-----------GT1  <---------AHL20(2)<-------TEIL   --------->AHL20(2)  <-   ttcactctctctttttctttatttattttattttcttccttcttttatattatttagaaaaaaaggtccacatctatttaattaaatccaattttatgtg  12054700                                                                <---------ARR11(3)           <---------YAB1                                       --------->ARR11(3)        <---------YAB1                                   --------->ANAC58      --------->ATHB51                                   --------->ANAC46     <---------YAB1                                     ------>ZmHOX2a(2)   <---------ICU4                          ----------->GT1--------->LBD16   --------->YAB1                         ----------->GT1--------->ANAC58  --------->ICU4                        ---------->DOF2 <---------LBD16  <---------YAB1              ================================HOX2a_HOX2a --------HAHB4      ---------->DOF2 <----------DOF2    <------ZmHOX2a(2)                --------->AHL20(2) -------->YAB1  --------->DAG2<------ZmHOX2a(1)       <---------ARR14(2)                <---------AHL20(2) --ANAC46----------->GT1    <---------TOE2(3)         --------->ARR14(2)               --------->AHL20(2) --------YAB1  ---------->DOF2=================================HOX2a_HOX2a        ------>ZmHOX2a(2) -   tattattattattgttataaagcaaagagtaaggaaggctttaaaagttaaatttggatccgcaaacatctcattgctcagtgatccgattaaattgttt  12054800                                                                                                   <-                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                               ------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                             ========                                                                                             --------                                                                                             ========                                                                            <---------ICU4   <-------                                                                            --------->YAB1   --------                                                                         --------->AtMYB61   --------                           --------->YAB1                               --------->MYB46(3)   --------                          <---------YAB1                              --------->ANAC46       <-------                          <---------AHL20(2)         <---------TOE1(2)<---------ALFIN1       <-------                         --------->AHL20(1)      ------>NtERF2       --------->MYB46(3)      >>>>>>>>                         --------->AHL20(2)   ------->TEIL       --------->At4g35610     <-----------     --------->ICU4      <---------AHL20(1) ------->MYC3         ------>ZmHOX2a(1)  <---------TOE2(3) ---------->GT1         --------->YAB1      <-------MYC3         <---------At4g35610<---------TOE1(3)   ttgggtaaaaattgtgttttggagaaatataataaacacaaaatcatgtgcctcccatgttgttgtcctctcccaccatcatgtctaaggtgtccacgtg  12054900 --------->WRKY38(1) ------GAMYB -------ANAC58 -------ANAC46 -------ANAC58 ---NtERF2 --->ALFIN1 -MYC4 >MYC3 >PIF5 -MYC3 -MYC2 >MYC2 -PIF5 >MYC4 ====================MYC_MYB ->PIF3(3) ======MYC_MYB <---------ANAC46 --PIF3(3)    <------MYB46(1)                                                                      -- ->O2       <--------P                                                                    <---------ZAT2 ->ANAC46 <------MYB46(1)            <---------LBD16                                      --------->ZAT2 ->TGA1a  <------MYB83         <---------GLK1(2)                                          --------->At4g35610 --O2<---------YAB1  ----------->HVH21   ---------->DOF2                                  <---------At4g35610 --TGA1a<---------WOX13(1)     --------->ARR11(3)      <---------GLK1(2)      <-----------GT1      -- >>HY5--------->ATHB12   --------->WOX13(1)      ----------->HVH21   --------->YAB1 --------->ARR14(2) -----PIF3(2) <------MYB83  --------->YAB1 --------->DAG2           <---------YAB1  <---------ARR14(2)   gcgttgtctgattggtagggtatgtgacaatcagatttttggggaaagggagggacagaattggaatttgataatagtttttacccgatttgagctggac  12055000  Previous    Next  AGI:  At1g33240.1    Description:  AT-GTL1 (Arabidopsis thaliana GT2-like 1); transcription factor. similar to GT2, transcription factor [Arabidopsis thaliana] (TAIR:AT1G76890.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO62851.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005) Range:  from: 12051451    to: 12054526    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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