Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------ZAT2                  <---------At4g35610                  --------->ZAT2                  --------->At4g35610          --------->GLK1(1)          <---------GLK1(1)                                                  <---------At4g35610       ------->GAMYB                                                         --------->At4g35610     <---------LBD16            ---------->DOF2                      <---------ATHB12    --------->MYB52(1) --------->LBD16                              ------>MYB46(1) <----------DOF2 <---------ATERF1(1)                                ------>MYB83               ------ -------GT1    ----------->RAV1(2)           <-----------GT1   <-----------GT1        ----------->GT1   tcggtttaacggaaatcgcctgctccccaaaaaaaaaagagtttttttaactgaaataagtctttctaccaatcttgttagcagaaaaatgtgacaatag  12004500                                                                            <-----------GT1                                                                <--------ATHB1                       <---------GLK1(2)                        -------->HAHB4                   <---------ANAC58                             --------->ATHB51                   <---------ANAC46   <---------TOE1(3)        <---------AHL20(2)                   <---------ANAC58   <---------TOE2(3)        <---------ATHB51         <---------AHL20(2)              <---------TGA1a   --------------->AGL15          --------->AHL20(2)     <---------YAB1              --------->TGA1a   <----------DOF2             <---------AHL20(2)     <---------AHL20(2)              =============================bZIP_DOF        <---------AHL20(2)      --------->AHL20(2)          --------->ANAC58      <---------------AGL15      --------->AHL20(2)      <---------AHL20(1)       <---------ARR14(2)     ---------->ID1       ----------->GT1     --------->MYB52(2)       --------->ARR14(2) <---------ANAC58      --------->ALFIN1<---------ICU4     --------->AHL20(1) --->YAB1 --------->ANAC58<---------ANAC58      <---------REM1(1)    <---------MYB52(1)--------->AHL20(2)   tagtagttcgatacgctcgtgacttgattcttgtctttttatggtttatggtgtagcaaaattaaataattgttagtttttctattttattatataaaac  12004600                   <---------AHL20(1)                   --------->AHL20(2)                   <---------AHL20(2)                --------->AHL20(1)               <---------AHL20(2)               --------->ATHB51               --------->AHL20(2)                                                         --------->AHL20(2)               <---------ICU4                                                     <---------MYB46(3)              --------->ICU4                                                    <---------WOX13(1)           --------->AHL20(2)                                                 --------->ATHB12           <---------AHL20(2)                                                 --------->ATHB51          --------->AHL20(2)                              --------->ANAC55(2)<---------AHL20(2)       --------->ATHB12                                   <---------ANAC55(2)<---------YAB1      --------->ICU4                              <----------DOF2         <---------AHL20(2)   aatatagaatgatttaattattttatttcttagaatgttttataagtttcaactttcaatacatgactatttgtattttataattggttgaatcaaatat  12004700                                                                                                   --                                    <-----------GT1                                                <-                                <---------AHL20(2)         <------MYB83                           ---                               <---------AHL20(1)          <------MYB46(1)                        <--                               --------->AHL20(1)         --------->MYB59                         ---                             <---------AHL20(2)           --------->MYB111(1)                     ---                            --------->AHL20(2)            --------->MYB46(2)                      <--     <---------AHL20(1)    <---------YAB1                <--------P         <---------AHL20(2)    <--     --------->AHL20(1)   --------->AHL20(2)        --------->TOE2(2)      --------->AHL20(2)    ----     --------->AHL20(2)  <---------ICU4       <---------YAB1               <---------AHL20(2)    <---     <---------AHL20(2) <---------YAB1 --------------->AGL15     <---------MYB52(1)            ------  --------->YAB1        --------->ICU4 <---------------AGL15   <---------MYB46(3)              ------ --------->AHL20(2)    --------->TOE2(3)   <---------AHL20(2)  --------->MYB52(2)      --------->AHL20(2)   caaataataaatttgtttactaaaacattattatatattttctatattatgaaacataggtaggtttgttagtcaaaataaatggtctataaaatgcaag  12004800         <------MYB83         <------MYB46(1) --------->TOE2(3) ------->ARR11(3)                                       <---------DAG2 --------ARR11(3)                                       <----------DOF2 ------>GLK1(1)                                     <---------RAP2.6(2) -------GLK1(1)                                    --------->RAP2.6(3) ------>CCA1(1)                                 <------NtERF2             <---------ICU4 ------>RVE1(1)                               <---------ANAC58          <---------AHL20(2) -------RVE1(1)                               <---------ANAC46         --------->AHL20(2) -------CCA1(1)                               <---------ANAC58         --------->YAB1 ----->ARR11(3)          <---------ATHB12<---------ANAC46             <---------ATHB12  --------->ANAC58 ------ARR11(3)      --------->MYB46(3)  <---------ANAC58         ------------>CBF      --------->ANAC58 --->ANAC58        --------->ANAC46      <---------AtLEC2   <---------ANAC58   <---------YAB1 --->ANAC58        <-----------GT1       <---------ANAC58   <---------ANAC58----------->TGA1   atatcttagctaggtgtctataaaccactcactgctacttgctgcttggcgtagacggcttttcgtttcccaataaaaatgacgatttttaagcaaacaa  12004900                   ----------->RAV1(1)                                           <----------DOF2                  <----------ID1          --------->YAB1                        <--------------------       *TSS  ---------->DOF2             <---------YAB1                      ------>ZmHOX2a(1)      <   --------->TOE2(3)        --------->MYB52(1)                      --------->ZAT14       ------>NtERF2   aaaaacattaatctataaagacaacaaaaaaaacagagttgttctcataaaccaattcatacacaaacactctagtctcctctctttttctctgccttct  12005000                                                                                            <--------                                                                                         ------>NtERF2                                                                                         <---------RAP2.3(1)                                                                                        <---------RAP2.6(2)                                                                                        <---------RAP2.3(3)                                                                                        <---------RAP2.3(2)                                                                                     ================                                                                                     ================                                                                                     --------->O2                                                                                     --------->ANAC46                                                                                     <---------TGA1a                                                                                     <---------O2                                                ------->GAMYB                        --------->TGA1a                                             ----------->RAV1(1)            <------ZmHOX2a(1)                                        <-------TEIL                     <------ZmHOX2a(1)<------NtERF2                                       --------->CCA1(2)               --------->ALFIN1 <---------DEAR3(1)                                      <---------ARR14(2)              <------ZmHOX2a(1)--------->RAP2.6(3)         <-----------GT1              --------->ARR14(2)           <------NtERF2   --------->MYB52(1)       <---------AHL20(2)        <-----------HVH21                <------NtERF2 <---------At4g35610  <---------AHL20(2)          ------>ZmHOX2a(1) ===============================================MYC_MYB ----ANAC81           ----------->RAV1(2)   --------->MYB46(3)    --------->LBD16 ----------->HVH21 ----------DOF2  ------>ZmHOX2a(1)   --------->At4g35610        <---------LBD16 --------->At4g35610   ctcttttatttattccctccttccctctggtcctccatcagatacaacaacagagactccaagatggccggaggaggaggagagctcacggcggctttgt  12005100                                                                                                  <--                                                                                                 ----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                              ------>NtERF2                                                                                              <------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <------NtERF2                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           <---------ATERF1(1)                                                                                           ------>NtERF2                                                                                           <---------DEAR4(2)                                                                                           <---------RAP2.6(1)                                                                                           <---------RRTF1(1)                    --------->LBD16                                                        <---------RAP2.3(1)                   <---------ANAC46                                                        <---------ORA47(2)                   <---------DEAR3(1)                                                      <---------ERF1                  <---------LBD16                                                         <---------RAP2.3(2)                  <---------------------WRI1                                              <---------RAP2.6(2)          --------->LBD16                                                                 <---------DREB2C(2)         <---------DEAR3(1)                                                               <---------RAP2.3(3)         <---------ANAC46                                                                 <---------ANAC46        <---------LBD16                                                                   <---------RRTF1(3)        --------->ATERF1(1)                                                               <---------RRTF1(2)        <------NtERF2<------NtERF2                                                        --------->ATERF1(2)       <---------RAP2.3(1)                                                                <---------ANAC58      <---------RAP2.3(2)                                                                 <---------ATERF1(2)      <---------RAP2.3(3)                                                                 <---------ANAC58      <---------DEAR3(1)                              --------->DAG2                      <---------DEAR3(1) ---------->DOF2<---------DEAR3(1)         <-------GAMYB                                 <---------ABI4(1) --DOF2<---------ORA47(2)                <---------TOE2(3)                               --------->ATERF1(1) ==bZIP_DOF   --------->MYB52(1)         <---------TOE1(3)                           --------->ALFIN1 ==bZIP_DOF<------NtERF2        <------ZmHOX2a(1)   ---------->DOF2   ---------->DOF2<-----------RAV1(1)   tgaaaaagacggcggagaacggcggagaagagaaggatgagttagggttgaagcaaaaggtttggattgaatcaaagaagctatggattgtggcggcgcc  12005200   ------>ZmHOX2a(2)  <------ZmHOX2a(2) <---------ARR11(3) --------->ARR11(3) ----NtERF2 -->NtERF2 ---->DEAR3(1) -NtERF2 --->ATERF1(1) ---RAP2.3(1) ---ATERF1(1) ->RAP2.3(3) ->RAP2.3(2) ->DEAR3(1) --DEAR3(1) >ORA47(2)             <-------TEIL >RAP2.3(1)          <---------SPL7           <---------ATHB12 >ATERF1(1)  --------->GLK1(2)              --------->WOX13(1) >ERF1  --------->ANAC46            --------->YAB1                                --------->At4g35610 >RAP2.6(1) --------->ARR14(2)     <---------ATHB51  <---------At4g35610          <---------At4g35610 >DEAR4(2)  <---------GLK1(2)      <---------ATHB12  --------->At4g35610       <---------At4g35610  < >RRTF1(1)  <---------ARR14(2)   <---------------AGL15               ------>ZmHOX2a(1) --------->ZAT6   agcgatcttcacgagattctcaacgttcggagtttcaataataagtcaatctttcatcggccatcttggtcctatagagttggctgcttactctatcacc  12005300                                                      <-----------GT1                                                     <---------YAB1                                                   -------->ATHB1            ----------->GT1                                                   <---------ICU4         ------>MYB46(1)                                                   --------->YAB1--------->AHL20(2)                                                   <--------HAHB4<---------AHL20(2)                                                   --------->ATHB51       ------>MYB83             --------->LBD16                      <---------ATHB12        -------->P           <---------LBD16                        <---------ATHB51   <-----------GT1          ------>ZmHOX2a(1)              <----------DOF2        <---------AHL20(2)    <---------MYB52(1)             --------------->AtSPL8       --------->AHL20(2)   <---------ICU4 ---------At5g28300        --------->ARR11(3)     --------->ICU4<---------AHL20(1)  <---------ATHB12   ttcaccgttctcctccggtttagtaatggtatcttggtgagtactttcttcaattattactctcaatttttttaccaacaagttaaatcatttcttcaaa  12005400  Previous    Next  AGI:  At1g33110.1    Description:  MATE efflux family protein. similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G33080.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G33090.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G33100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45402.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 12004907    to: 12008813    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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