Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <----------DOF2                                                                      <---------------AGL15                                                                      --------------->AGL15                                                                      <---------DAG2   --------->AHL20(2)                                                                     ----------------->AGL3                                                                     ----------------->AGL2                                                                     ----------------->AG    <-------                                                                     ----------------->AGL1  --------                                                                     <-----------------AG    <------- ----------->GT1                                --------->AHL20(2) <-----------GT1     <---------AHL20(2) ---DOF2                               <---------AHL20(2)    <---------AHL20(2)  --------->ANAC58  -- -DAG2                 --------->AHL20(2)  ----------->GT1   --------->AHL20(2)  --------->ANAC58  <-   gtttagtaaaatagacaatgtgcaaaaaattccaaacttcttaaattgaaaaaaatactatatttaaatttacctttttaagtaagaaattaaaagattt  11844500      --------->ANAC46    --------->ZAT6   --------->ZAT18                                                                   <---------AHL20(2)   --------->ZAT14                                                                   --------->AHL20(2)   <---------ZAT18                                                              <---------MYB52(1)   <---------ZAT14                                                             <-----------TGA1 --GLK1(2)                                                                     --------->LBD16<------ ->ARR11(3)                                                                    <-----------HVH21 --ARR11(3)             --------->MYB46(3)                  ----------->GT1   --------->ANAC55(2) <-- ------------->AtSPL8  -------->P               <---------WRKY38(1)           --------->ANAC46<------ --------------AtSPL8--------->MYB46(3)       <-----------HVH21           <---------GLK1(1)<---------   tgtagtacactacatgttttaaaacaaccactatccaaacaaaaacttggtcaccgaataaactgtagaaatatcgatttccgtcatttaaattcacttt  11844600                                                    =======================================bZIP_DOF                                                    =============================================bZIP_DOF                                                    --------->TGA1a                                                    =================================bZIP_DOF                                                    <---------O2                                                    --------->ANAC58                                                    <---------TGA1a                                                    --------->ANAC58                                                    --------->O2                                          ====================MYC_MYB             <----------ID1                                          <-------GAMYB                           --------->ANAC58    <-------GAMYB                        <---------MYB46(3)                       --------->ANAC58    <---------ANAC58                    <------NtERF2                            --------->DAG2    <---------ANAC58 ---------->TaMYB80 --------->ALFIN1                        ---------->DOF2   <---------MYB46(3)<---------KAN4(2)<---------ANAC58                    ---------->DOF2 ---DAG2       <---------ANAC46       <---------bZIP60(2)                ------>ZmHOX2a(1) -------YAB1   <---------ANAC58       <---------ANAC58               <---------ARR14(2) ----DOF2      <---------ANAC58       <---------ANAC46               --------->GLK1(2)---------->DOF2 --GT1<---------MYB46(3)      --------->YAB1      --------->CCA1(2)  --------->ARR14(2)   atttttggttgtttttttcttggaatatgcaagagtaatggcgtggttgaagacacgagagagagagagagaatcctaaagaaaaagccaaagcatatta  11844700                                ---------->DOF2                             --------->TOE1(3)                             ------->GAMYB                             --------->TOE2(3)                           ------>MYB46(1)                           -------->P                           ------>MYB83                          <---------ALFIN1                          ------>MYB46(1)                          ------>MYB83         <---------YAB1          ---------->DOF2   <-------TEIL                       --------->ANAC58      <--------HAHB4           <---------AHL20(2) --------->ZAT18                       --------->ANAC58      --------->YAB1 <---------AHL20(2)       --------->DAG2                       --------->ANAC46     <---------YAB1<-----------TBP          ---------->DOF2                   --------->MYB46(3)  --------->ZAT6--------->TOE2(3)--------->AHL20(2)--------->ALFIN1   agaagaagagaaccaaaacgaacaaacccaaccctaaagaaacactattattaaacctatatttatagacatttaaagagagagtgaaaggtgcagaaga  11844800                                   <---------YAB1        *TSS                                 --------->YAB1         --------->AHL20(2)                              --------->bZIP60(1)       <---------AHL20(2)                              <---------bZIP60(1)     <---------YAB1                           <------ZmHOX2a(2)         --------->TOE2(3)                          <---------ARR11(3)        --------->YAB1              --------->AtMYB61                          --------->ARR11(3)        <--------HAHB4           --------->ANAC46                    --------->TOE2(3)              <---------YAB1<---------At4g35610            -----                    --------->TOE1(3)       <----------DOF2      --------->At4g35610  ------>ZmHOX2a(1)   aaacagagacagagttcaaataccttaagatcacatcatcatatagcttttgtatcattaaaatggcagttcaagctcaacaccattcctccaatctcct  11844900                                            <----------DOF2                                           <---------ANAC58                                           <---------ANAC58                                   -------           ----------->GT1           --------->ATHB12                                        --------          --------->DAG2             <---------ICU4               <---------TOE2(3)    --------->ZAT18        ---------->DOF2              --------->ATHB51        --------->ATHB12          <---------ZAT14  ------>ZmHOX2a(1)                 --------->ICU4           <---------ICU4         <---------ANAC46 --------->TOE2(3)                  <---------YAB1     <---------ANAC58         <----------DOF2     - ->ZmHOX2a(1) <-------TEIL       <-------TEIL          <---------ANAC58   <---------YAB1     <-------   cttcctcaataaaaggttcattttctctctgtaaattcattatttgcttttagttttgcttattgattacggttttatgtttctttgtgtgaacagaaac  11845000                                                 --------->ARR11(3)                                                 <---------ARR11(3)                                                 --------->ARR14(2)                                                 <---------ARR14(2)                                          <---------At4g35610                                          <---------ZAT2                                          --------->At4g35610                                          --------->ZAT2      ---------->DOF2                     ----------->RAV1(2) -->MYB52(1)                          --------->ANAC46                                             <- ->ARR14(2)                           --------->ANAC58<---------ANAC58                         ------ --------->DOF2        <-----------GT1--------->ANAC58<---------ANAC58        <<<<<<<<<<<<<<<<<LFY -- --ARR14(2)    ----------->GT1    --------->YAB1 <---------GLK1(2)   <---------ARR11(3)   <-------TEIL   gggaaagagaaagaacatagtaattttacattacaatcacaagcagctggagattttcttgatcaaaccaatatgttattcaacaatggaagttcgtaaa  11845100                           <---------------AGL15                           <---------MYB59                           --------------->AGL15                          ----------------->AGL2                          ----------------->AGL1                          ----------------->AG                          ----------------->AGL3                        <-----------GT1           --------->GLK1(2)              --------------->AGL15           --------->YAB1                                ---------              =============================MADS_MADS                   --------->YAB1      ---------- --------ARR11(3) --------->AHL20(2) <----------ID1         ------->TEIL        <---------------AGL15 ---->DOF2 <-----------GT1======================================================================MADS_MADS ------->ARR11(3) <---------AHL20(2)<------ZmHOX2a(1)--------->ALFIN1 <---------YAB1--------->YAB1   agttctcttgttttttccattaaaatttaccaaaattaggagacaaaatgagaatgtgtgtgtatgtctcttattataggttctaatcagagaaaaagaa  11845200                     <---------ICU4                                                                <-                    <---------MYB52(1)                                                             --              <---------ICU4                                                                  <------              --------->YAB1                                                                 --------             <---------ATHB12                                                              <---------At5g28300           --------->WOX13(1)                                                            --------->MYB46(3)          --------->MYB46(3)                     ------>ZmHOX2a(1)                    --------->YAB1 --------------->ANAC81   <---------ANAC55(2)   --------->TOE2(3)         --------->ANAC46<---------ALFIN1 >DOF2<---------MYB52(2)<-----------GT1      --------->ARR14(2)   --------->ZAT6     <---------ATHB12   gaagagaaacgaacaatcatcagttattacctatgcagtctcatcagtttcctcaagttatagacttatctctattacacaactacaatcatccaccgtc  11845300                                                                       <---------ARR11(3)                                                            --------->ANAC55(2)                                       <------ZmHOX2a(2)    <---------At4g35610                                      <---------ARR14(2)    --------->At4g35610                                      <---------ARR11(3)    <---------O2                                      --------->ARR11(3)    --------->O2                                    ----------->ARR10       <---------TGA1a       <---------ZAT18                               --------->LBD16              ==============================RAV      <-------TEIL            <---------LBD16               <---------ANAC55(2)<---------At4g35610   ----------->GT1           <---------LBD16                ----------->RAV1(2)--------->At4g35610 --------ARR14(2)          <-----------GT1                  ========================================= ------->ARR14(2)      --------->AHL20(2)       ======================bZIP_DOF<-----------RAV1(1) -----HVH21   <------ZmHOX2a(1)------>NtERF2    ---------->DOF2        --------->ARR11(3) ->DEAR3(1)   ================================HOX2a_HOX2a <-----------GT1     <-----------GT1     ---   gaatatggttcatacaggactccgattattttccggcgaagatcaggcacaaaagattagtcacctgtctgaagatgtttttgctgcacatatcaatagg  11845400  Previous    Next  AGI:  At1g32740.1    Description:  protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G17680.1); similar to ATP binding / protein binding / shikimate kinase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G47050.1); similar to hypothetical protein 40.t00029 [Brassica oleracea] (GB:ABD65150.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro domain S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066) Range:  from: 11844857    to: 11846327    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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