Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    -                                                                                                    -                              <---------GLK1(1)                                                     <                             --------->ARR14(2)                                                    <-                             <---------ARR11(3)                                                    <-                    <------NtERF2                                                                  <-                    --------->ATERF1(1)                                                            <-                    --------->RAP2.3(1)                                                            --                   ------>NtERF2                                                                  <--                   <---------ATERF1(1)                                                           ----                   <---------RAP2.3(1)                                                           ----     <------NtERF2 <---------ORA47(2)                                                            <---    --------->LBD16<---------DEAR4(2)                                                            <---   --------->DEAR3(1) <---------ZAT18                                                           <----  <---------LBD16  <---------ERF1                                                               <---- ------>NtERF2    <---------ANAC46                                                              <---- --------->LBD16  <---------RAP2.3(3)                                                          <----- ------->MYB46(3) <---------RRTF1(3)                                      ------->GAMYB     --------- ---->ZmHOX2a(2)  <---------DEAR3(1)               <---------ARR11(3)    --------->MYB46(3) --------- ----->ARR14(2)   <---------RAP2.3(2)           <---------DAG2         --------->YAB1      <---------LBD16 ------ARR14(2)   --------->DEAR3(1)   <---------ANAC46                <-----------GT1   <---------ZAT2 >ZmHOX2a(1)     <---------ABI4(1) <-----------HVH21                --------->YAB1       --------->ZAT2 --->RAV1(2) --------->MYB52(1)------>ZmHOX2a(2)<----------DOF2<----------DOF2    <---------ALFIN1---   atccgccggagtagaaaacggcggcgaactcgatctccgtctcgggtttgctttatcttcttcacctttgtaataaccatctccccatccgagcacggag  11800600           --------->TOE2(2)       --------->GLK1(1)   <------NtERF2  --------->LBD16 --------->DEAR3(1) <---------ANAC46 ---------LBD16                                  <---------ANAC46 -------->RAP2.3(1)                              <---------ANAC58 -------->ATERF1(1)                              <---------ANAC58 ------NtERF2                                 --------->TOE2(3) --------ATERF1(1)                            --------->TOE2(2) --------DEAR4(2)                            <---------HSFC1(2) --------RAP2.3(1)                           --------->HSFC1(2) --------ORA47(2)                            <---------HSFB2a(1) ---->NtERF2                                 --------->HSFB2a(1) -------DEAR3(1)                             --------->MYB46(3) ----->ATERF1(1)   <-------GAMYB            ------>MYB83 ----->RAP2.3(1)  <---------DEAR3(2)        -------->P ---NtERF2 --------->TOE1(2)                ------>MYB46(1) ------ABI4(2)--------->ANAC46        <------MYB83                           <---------TOE2(3) -----ATERF1(1)   <---------MYB46(3)  <------MYB46(1)                       <---------DOF5.7(2) -----DEAR4(2)----------->HVH21      --------->SPL7                   <---------ANAC58 -----RAP2.3(1)------------>AtMYB77  <---------TOE1(2)            ---------->DOF2                   - ----DEAR3(1)--------->SPL7       <---------ANAC58               --------->YAB1                  ---- >ANAC58  --------->YAB1          <---------ANAC58              <---------ATHB12  --------->At4g35610 >ANAC58 <---------ATHB12         <---------ANAC46  <---------TOE1(2) <---------ANAC58          <---- ------>DEAR3(1) <---------DEAR3(1)  <---------AtMYB61        --------->WOX13(1)  <---------At4g35610   gcgccggagaaatcatacgacggttgccagaatatagcgtaggtccaaccttcgtgtgttccttcaatcaaagcttgtaaacgttgctgaagagtctctt  11800700                                                                                   --------->ANAC58                                   ------>NtERF2                                   --------->ANAC58                                   <-----------HVH21                             <------NtERF2                                  --------->DEAR3(1)                             --------->ATERF1(1)                                  <---------ANAC46                              --------->LBD16                                  <---------DEAR3(1)             <-------GAMYB  <---------ATERF1(1)                                 --------->ATERF1(1)            <---------MYB46(3)--------->SPL7                                 <------NtERF2               <---------ANAC46   <---------SPL7                                 --------->RAP2.3(1)        <------NtERF2     <---------LBD16                                --------->LBD16            ------>NtERF2  <---------ATERF1(1)                                ------>NtERF2              <-----------HVH21  --------->ATERF1(1)                               <---------ATERF1(2)         <---------RAP2.6(3)<------NtERF2                    --------->ARR14(2)                    --------->DEAR3(1) ------>NtERF2                   --------->ARR14(2)  <------NtERF2     <------NtERF2  <------NtERF2                   <---------GLK1(2)<------NtERF2        --------->ATERF1(1)--------->DEAR3(1)                   <---------ARR14(2)<---------DEAR3(1)  --------->RAP2.3(1)--------->ANAC46                 <---------RAP2.6(3)--------->ATERF1(1) <---------RAP2.3(1) <---------DEAR3(1)                 --------->LBD16<---------ATERF1(1)     ------>NtERF2 <---------ANAC46              -         ----------->RAV1(2)   <---------DEAR3(1)       <---------ATERF1(1)--------->ATERF1(1)     <-        --------->LBD16        --------->DEAR3(1)      <---------DEAR3(1)<---------DEAR3(1)        --        ------>NtERF2         <---------LBD16          --------->DEAR3(1)----------->HVH21         --      <---------LBD16       --------->DEAR3(1)        <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --------->DAG2 -------->AHL20(2)<------NtERF2--------->ATERF1(2)    --------->ATERF1(1)--------->DEAR3(1)       --- ----->ATHB12   <---------ANAC46<---------RAP2.3(1)   <------NtERF2<---------MYB46(3)    ---------->DOF2 -----YAB1     <---------LBD16--------->ATERF1(1)    <---------ATERF1(1)--------->ATERF1(1)       <--   gattaaatcccgcctgtgccggaatctccatcgccggcgtcggagttgtttcagtcgtcgccgtcgtggttgtcgtcgacgccggaggccataaagttga  11800800                                                                              <---------MYB52(1)                                                                      <---------MYB46(3)                                                                      <---------REM1(1)                                                                    <-------GAMYB                                                                    <---------ANAC58                                                                    <---------ANAC46                                                                    <---------ANAC58                                                       <---------ATHB12      --------->LBD16                                                <---------MYB46(3) --------->MYB55(2)                                               --------->ALFIN1    <------MYB46(1)                                               <---------AtMYB61   <------MYB83                           --------->YAB1     <-------GAMYB        <---------MYB46(3)              <---------YAB1                 <---------MYB46(3)    --------->MYB52(2) -------->MYB52(1)        <---------YAB1     <---------DEAR3(2)   <---------TOE2(2) --------GLK1(1)   --------->HSFC1(2)       <---------DREB2C(2)   <---------AtMYB61 ------->CCA1(2)   <---------HSFB2a(1)      <---------DEAR3(1)    <---------TOE1(2)   <---------ATHB12 ------->GLK1(1)   <---------HSFC1(2)       <---------At1g77200  <---------MYB52(1) --------->WOX13(1) ------>ARR11(3)   --------->HSFB2a(1)     <------NtERF2       --------->ATHB12   <---------ATHB12 -------ARR11(3)---------->DOF2          --------->ETT(2)  <-------TEIL    <---------ANAC46    ------   gatatcggaagagctcatgaaagcttccatcatagaagcgttgtcgtcggtggtccaaagattcatcgttggttgtagccggtaatcagtcattccataa  11800900                                                                                               <-----                                                                                              -------        --------->At5g28300                                                                  <-------       ----------->GT1                                                                     --------->YAB1     <---------ANAC46                                                                      <--------HAHB4  --------->WRKY12                                                                         <---------ICU4  --------->WRKY38(1)                                                                     --------->ICU4  ----------->HVH21        <---------AHL20(2)   <------ZmHOX2a(1)                         <---------YAB1 <-----------HVH21    ------->MYC3           --------->CCA1(2)      *TSS                  <---------ATHB51 ---->DOF2            <-------MYC3         --------->CCA1(2)       ----------->GT1  <---------DEAR3(1)   accggtgaccggtaaaaaaaaacacgtttttaatgagagagagagagataggagaaagtcttcgtagtggagaaaaatggagagcgtctgcgattattat  11801000                                                           --------->GLK1(1)                                                      <---------ANAC58                                                      <---------ANAC58                                                      <---------ANAC46                                                     <------NtERF2                                                   --------->ALFIN1                                                 <---------bZIP60(2)                                                 <---------ANAC55(1)            <-------GAMYB                                                 --------->ANAC55(2)           <------MYB83                                                 <---------ANAC55(2)           <---------MYB46(3)                                                 <---------ANAC46         --------->ALFIN1                                                 <---------ANAC58        ------->MYC3                                                 <---------ANAC58        <-------MYC3          ------>ZmHOX2a(2)                      <---------O2           <---------O2        <---------ARR11(3)                     <-----------GT1          <---------ANAC46          --- ----AHL20(2)           ----------->GT1    --------->ARR11(3)  <------------CBF<------MYB46(1)    --- -->AHL20(2)     --------->At5g28300       <---------ARR11(3) --------->ATHB12 ----------->GT1    <-- --YAB1 --------->ARR11(3)              <---------TOE1(3) <---------ARR11(3)  <---------AtMYB61   <--   atgtgtaactgatcttgagggtgaatgtgtaaatttgttgttagggatattacgtggcgagatttcattgggaaacgtggatggttgtaagagagagaga  11801100                                                                                               <-----                                                                                              <------MYB46(1)                                                                                              <------MYB83                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                           <---------MYB52(1)                                                                                         <---------MYB46(3)                                                                                         ============                                                                                         <----------DOF2                                                                                    --------->SPL7                                                   --------->At5g28300             <---------SPL1(1)                                                ------>NtERF2                      --------->SPL1(1)                                            ----------->HVH21                     <---------SPL7-----        ------->TEIL                 <-------GAMYB----------->GT1               <---------------AtSPL3 ------>HSFC1(2)                    <---------MYB46(3)                          <------ZmHOX2a(2) ------>HSFB2a(1)          ------->GAMYB    ------>ZmHOX2a(2)     --------->LBD16------>ZmHOX2a(2)  < -------HSFB2a(1)       <-----------GT1   --------->ARR14(2)    <---------LBD16<---------ARR11(3)  <- -------HSFC1(2)  --------->LBD16   <-----------RAV1(1)--------->ICU4          --------->ARR11(3) <--   agcttcgatgaactcacatcccgatttaaccccatcgactgttggatcgacgcggtaagaattaagaccggaagtgagtgagatcgtacggctgtttggt  11801200     <---------CCA1(2)  ------->PIF5  ------->MYC3  <-------MYC3  ------->PIF4  ------->MYC4  <-------PIF4  <-------MYC2  <-------MYC4  <-------PIF5  ------->MYC2           <---------WOX13(1) ===========================bZIP_DOF <---------TGA1a       <--------ATHB1 <---------O2          -------->HAHB4 --------->TGA1a       --------->ATHB12 --------->O2          <---------ICU4                                        --------->ZAT2 ------HVH21          --------->ICU4                                         <---------At4g35610 ->MYB59              <---------ATHB12                                       <---------ZAT2 --MYB46(3)           <---------YAB1                                       <---------ZAT18 --AtMYB61  --------->ANAC46                 <---------WOX13(1)          <-----------HVH21     ------ ==========bZIP_DOF  <---------TOE2(3)     --------->ATHB12         --------->ZAT14            <----- ---->PCF2  --------->ANAC58           <-----------GT1              --------->ZAT18           <------ ---------TOE1(2)   --------->YAB1<---------ARR11(3)            --------->DAG2 <---------ZAT14<------ --------ALFIN1  <----------DOF2  --------->ARR11(3)         ---------->DOF2 --------->At4g35610 -------SPL7--------->ANAC58    ----------->ARR10   <----------DOF2 <---------ZAT14 ----------->GT1   cgcacgtgtatcacacgctctttaatgattgacttagattttaactgattgtttcttttgtaccaaagagtgaactgtgagctcagtggaaaaacacttt  11801300                                                           <---------AHL20(2)                                                         <---------AHL20(2)                <---------TOE2(3)                                                        --------->AHL20(1)      <---------ANAC55(2)                                                        --------->ARR11(3)      --------->ANAC55(2)                                                        <---------AHL20(1)    <-----------GT1     <---------DAG2                                     <---------ARR11(3)    <---------AHL20(2)     <----------DOF2        <---------YAB1              <---------AHL20(2) <---------ICU4 --------->YAB1 --->ZAT14                --------->AHL20(2)   <----------DOF2     <-----------GT1    <---------AHL20(2) ----ZAT14         <-----------GT1---------->ID1  --------->HSFB2a(2)     --------->AHL20(2)       <- ---DAG2         <---------AHL20(2)  <---------MYB52(1) --------->AHL20(2)<---------AHL20(2)--------- ----DOF2<-----------GT1  <---------AHL20(2)   <---------DAG2   --------->YAB1--------->AHL20(2) <---   actataacttttcacctattttttcgatttatatttgtcgttttgtcaacttttagaatatattttttataacagattaattacttattttataatgtta  11801400                                                                                               <-----                                                                                     <---------ARR11(1)                                                                                     <---------ARR14(2)                                                                                    <---------CCA1(2)    --------->AHL20(2)                                                       --------->ARR14(2)<-----    --------->AHL20(1)                                                     <---------TOE2(3)   <-----    <---------AHL20(1)    --------->ARR11(3)                        <---------AHL20(2)         <-----    <---------AHL20(2)  <---------TOE1(3)                          --------->AHL20(2)--------->ARR14(2) --------->AHL20(2)     <---------TOE2(3)--------->YAB1            <---------AHL20(2)<---------ARR11(3) --------AHL20(2)    --------->AHL20(2) <---------ATHB12           <---------AHL20(1)--------->ARR11(3) -->GT1  <---------AHL20(2)             --------->ICU4       --------->TOE2(3)--------->CCA1(2)------ ------YAB1    --------->YAB1      --------->TOE2(3)        --------->At4g35610   <---------AtLEC2   ttttaaaatattaaaaatcaaaatttaagatttgtaatctcaattatcaaatactgtgtcttagcttaattaattttgagatttgcatatctatataacg  11801500  Previous    Next  AGI:  At1g32640.1    Description:  ATMYC2 (JASMONATE INSENSITIVE 1); DNA binding / transcription factor. Identical to Transcription factor AtMYC2 (BHLH) [Arabidopsis Thaliana] (GB:Q39204;GB:O48644;GB:Q8W2F4;GB:Q9LPJ8); similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT4G17880.1); similar to phaseolin G-box binding protein PG1 (GB:AAB00686.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 11798790    to: 11800968    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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