Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------ANAC46                                                                  ----------->GT1          --------->HSFB2a(2)                                                                ----------->GT1            <---------HSFB2a(2)                                                               --------->ALFIN1            <---------HSFC1(1)                                                       <---------YAB1                <---------ICU4 -------AHL20(2)<-----------GT1                -------->P  <---------AHL20(2)  --------->YAB1   tttattctaatatgtgtttttctatactatattagtttagtttaagtgcaaccccttctaattaagtggtgtatatttgtataataaacatgtctagaag  11767100                                                                                                 <---                               --------->TOE1(2)                                            <--------                               --------->TOE2(2)                                            -------->ATHB1                              ----------->RAV1(2)                                          --------->AHL20(2)                        --------->GLK1(1)                                                  --------->ICU4                        --------->CCA1(2)                                                  <---------ATHB51                       <---------ARR14(2)                                                  <---------AHL20(2)                       --------->ARR14(2)          ------>NtERF2    ----------->GT1     --------->AHL20(2)                     --------->LBD16              <---------ALFIN1  --------->YAB1     --------->AHL20(2)                   <---------LBD16      --------->YAB1 <---------MYB52(1)              <---------AHL20(2)             <-----------GT1 ------->TEIL  ---------->DOF2         <---------YAB1  <---------ANAC55(2)   accaattctacatattcactatgcggatatgaacctgagtaatgacaaagcgacaccgttatcacatatatgataaaactatattacatataaattatta  11767200                      <---------YAB1                     --------->AHL20(1)                     --------->AHL20(2)                     <---------AHL20(1)               <---------AHL20(2)                     <---------ARR11(3)               --------->AHL20(2)                            <                     --------->ARR11(3)             --------->CCA1(2)                          ------          --------->GLK1(1)                        --------->ARR11(3)                         ------- --------->AHL20(2) <---------AHL20(2)         <------ZmHOX2a(1)                             -------- <---------AHL20(2)--------->ICU4   --------->YAB1 <---------ARR11(3)                   --------->ANAC58 ------TOE2(3)----------->GT1--------->ETT(2)<---------TOE1(3)                          --------->ANAC46 -ICU4    <---------GLK1(1)  <---------ETT(2)<---------TOE2(3)   --------->YAB1         --------->ANAC58   agtttaaatgtgatttctgtaaatatttttgtctacaaacaaaatttaaggaagatttaaaaaaaaatcatatcagtatttgtttattacaaggaaaaag  11767300             --------->AHL20(2)    <----------DOF2   <----------DOF2                            --------->GLK1(2)   <---------DAG2     <---------DAG2                            <---------GLK1(2)                 <-- -----------GT1    <-----------GT1                              --------->ARR14(2)              ----- ----->GT1 --------->ANAC46      <---------ARR11(3)     <---------ARR11(3)                     <----- -->DAG2   --------->ANAC58    --------->ANAC58         <<<<<<<ZML2                        <--------- -->DOF2   --------->ANAC58    --------->ANAC58   --------->ZAT6<---------ARR14(2)   <---------------   tataaccttttacaagaaaatatactttttctcaagaaatttgcctattttgccactagaacttcagattctcaaaaaaaaaacttgtttttttgttttt  11767400         <-----------GT1                                                           --------->ANAC46     <---------AHL20(2)                                                            <---------ALFIN1 - --------DOF2                                 ---------->DOF2                    <---------ALFIN1   < ----->ID1                             <-----------GT1                <---------ANAC46            --- ------GT1------------>CBF <-----------GT1<---------------AGL15     --------->ALFIN1   ------>ZmHOX2a(1) ---------------ANAC81 --------->AHL20(2) --------------->AGL15     <---------ANAC46*TSS  --------->ANAC55(2) ---------ANAC81    --------->TOE2(3) <---------AHL20(2)    ---------->DOF2   --------->PCF2 <-------   ctttttttttatttcaatttttcattaatataccctctatttaactgataaaggcaagttgcaaaagagggtgtgtgtttgccccactcctcacataatg  11767500      <-----------GT1    --------->YAB1                                                                                 <-    -------->HAHB4                                                                                 --   <---------YAB1                                                                               <---- --------->YAB1                                                                         --------->ANAC46 -------->ICU4                                                                          --------->ANAC58 ---------YAB1                             <-----------GT1                              --------->ANAC58 ------>YAB1                           <----------DOF2       <-------TEIL          <---------ARR14(2) --ICU4                        <-----------GT1  --------->ANAC46                   --------->ARR14(2)   tcataataatacaatcttcgaagttttcgcaattcacattccttttttccaagtcccaatacatacacatatacaaacacacacatatacacccaaacgt  11767600                                                          <-------TEIL<---------ANAC58            --------->AHL20(2)                           <----------DOF2  ------->TEIL                                        --------->ARR11(3)       ---------->DOF2 --------ANAC55(2)           --------->GLK1(2)        <---------ARR11(3)----------->HVH21 ------->ANAC55(2)          <---------GLK1(2)     ---------->DOF2     <---------ANAC46 -----MYB52(1)  --------->RVE1(1)                <---------WRKY45     <---------ANAC58   tatgtaactgcaaaaaaaatatcgaaacgagattctacaattagtctctagtcaaagagcttcatggcaatggtgtgaccccaaagttagtcttcacatg  11767700                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    -                                       ----------->GT1                                           ----                                  <---------YAB1                              --------->AHL20(2) ----                                --------->YAB1                                <---------AHL20(2) <---                             <----------DOF2                               --------->ARR11(3)   -----                          ---------->ID1                                   <---------ARR11(3)   <----                         <-----------GT1                                 --------->ICU4       -------                      <---------AHL20(2)                      --------------->AGL15   ------>ZmHOX2a(1)   tttcttaagtttcaaacattgaatttttttccttttataaatagttaagacttatcttcattttctaaaatagtcaagatttatattcctcttaaaaaat  11767800    <-----------GT1 <---------AHL20(2) ---------AHL20(2) ---------AHL20(1)             <---------AHL20(2) -------->AHL20(2)    --------->ATHB51 -------->AHL20(1)    -------->ATHB1 ----->AHL20(2)       <--------HAHB4                               <---------ARR14(2) ----->AHL20(1)       --------->ATHB12                             --------->ARR14(2) ------AHL20(2)       <---------ICU4  <----------DOF2             <------ZmHOX2a(1) ---->AHL20(2)       <---------YAB1<-----------GT1        ---------->DOF2 -----AHL20(2)       --------->ICU4<---------AHL20(2)   <---------YAB1                        <------ZmHOX2a(1) -->YAB1    ------>ZmHOX2a(1) --------->AHL20(2)    <---------WOX13(1)                    --------->TOE1(2)   aatttatttccttcctaagaagaattattagatttattttctttgctagtatagattgatgaaagtgaggaaatgggagaagaaatgaagaacacaggat  11767900                                                       <---------AHL20(2)                                                      --------->AHL20(2)                                                    <---------AHL20(2)                                                   --------->AHL20(2)                                                  <---------YAB1                                                 --------->AHL20(2)                                                --------->YAB1                                                <---------ICU4                                                --------->ATHB51                                                <--------HAHB4                                               <---------YAB1                                          --------->ANAC58                                  ---------                  <---------MYB52(2)      --------->ANAC58                                  ---------             --------->ANAC46         <------ZmHOX2a(1)<---------YAB1                       <--------      <<<<<<<<<TBF1             ---------->DOF2--------->ICU4                            --------->AHL20(2)   gtgtcttcttcttctaagtcactaacaaaatcaacaaagaggagaagccattattatataatagagagattgagagaagagatttatccaaaaaaatatt  11768000  Previous    Next  AGI:  At1g32540.1    Description:  LOL1 (LSD ONE LIKE 1). similar to LSD1 (LESION SIMULATING DISEASE) [Arabidopsis thaliana] (TAIR:AT4G20380.5); similar to LSD1 (LESION SIMULATING DISEASE) [Arabidopsis thaliana] (TAIR:AT4G20380.6); similar to LSD1 (LESION SIMULATING DISEASE) [Arabidopsis thaliana] (TAIR:AT4G20380.7); similar to LSD-One-Like 1 [Brassica rapa] (GB:BAD95789.1); contains InterPro domain Zinc finger, LSD1-type (InterPro:IPR005735) Range:  from: 11767484    to: 11769860    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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