Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       ----------->GT1                                                                   <---------YAB1                                                                 --------->YAB1                                                                 <---------ICU4                                                                 <--------HAHB4                                                                 <--------ATHB1                                                                 --------->ATHB51                                                                 --------->ATHB12                                                        --------->YAB1 <---------ZAT6         -------                                           <---------WOX13(1)   --------->ICU4        --------->GLK1(2)                                         --------->ATHB12       <---------ATHB51     <---------GLK1(2)        --------->YAB1                  <---------AHL20(2)      <---------ATHB12     <---------ARR11(3)       <---------ATHB12             <---------ICU4 --------->ANAC46--------->ICU4    --------->ARR14(2) -------GLK1(2)                <-----------GT1 --------->CCA1(2)--------->AHL20(2)   <---------ARR14(2)   gaatttcaaatcaaaatccattctctaaccatttcacattatttcattgatatacgaatcaaaacaataattagtgaaactatacaagattctcaatttt  11749400                                                                       ----------->GT1                                                                       --------->ANAC58                                                                       --------->ANAC58--------->AHL20(2)            --------->ZAT2                                  --------->LBD16            <---------AHL20(2)            <---------At4g35610                       --------->ARR14(2)            ------>MYB46(1)            --------->At4g35610                  --------->At4g35610  XXXXXXXXXXXXXXXXXXXX>MIR863-3P            <---------ZAT2                       <------NtERF2       ---------->DOF2------>MYB83   <-----------GT1    <---------YAB1     ------->GAMYB<---------ARR11(3)          --------->TOE2(3) -->YAB1   <---------TOE1(2)        <---------ATHB12  --------->ARR11(3)          <---------MYB59   aaaattcacttcgcagcttgaattctcatagctatcaaatcaaccgtaggcagcaatatctccgaaaaatcgaaagtaacaaaacctaatttataaactg  11749500                                                                           --------->HSFB2a(2)              --------->YAB1                                               <---------HSFB2a(2)              <---------ICU4       <-----------GT1                  <---------TOE2(3)             <---------ATHB12   ----------->GT1                     <---------TOE1(3)          ------>ZmHOX2a(1)     --------->ANAC58                   <-----------RAV1(2)        --------->YAB1          --------->ANAC58             <---------TOE2(3)                -------       <---------YAB1      <----------ID1                   --------->MYB52(1)           <---------ARR11(3)      <-----------GT1  --------->MYB52(1)       <---------GLK1(1) <-------TEIL           --------->ARR11(3)   acacaaattatcctaatcatcgaactaatggaacaagttacaaaccctagatttcggtaaactaagggttcaggtttctcgagagtgagaagatttcgag  11749600                   --------->At4g35610                   <---------At4g35610                   --------->HSFB2a(1) --------->AHL20(2)                   --------->ZAT2     <---------ARR11(3)                   <---------HSFC1(2) <---------AHL20(1)      ------>ZmHOX2a(2)       --------->ZAT18     <---------GLK1(1)        <---------PCF2     --------->GLK1(1)      --------->ABI4(2)     <------ZmHOX2a(2)      <---------DEAR3(1)    --------->ARR11(3)      --------->MYB55(2)                                                  -----    <---------ARR14(3)      <---------MYB46(3)                                         ---------->DOF2    --------->GLK1(2)       <---------RAP2.3(3)                                <---------MYB46(3)    <---------ARR11(3)     --------->ALFIN1                                 <---------ANAC46<--------    <---------AGP1 --------->HSFC1(2) --------->ARR11(3)                    <------MYB83--------->DAG2    --------->ARR14(2)    <-----------HVH21                                 <------MYB46(1)<---------DEAR3(1)    <-----------ARR10     <---------MYB52(1)                               <---------MYB46(3)--------    <---------ARR14(2)-------->P------>NtERF2                              --------->MYB55(2)<------NtERF2   <------ZmHOX2a(1)  --------->MYB52(1)                                  --------->ALFIN1 <---------DREB2C(2) -->HSFB2a(2) <---------HSFB2a(2)<------NtERF2                    <-----------GT1     ---------->DOF2   agtgaggatctctgttttcgaagctaccggtgggcgcgaatatatatatcggagtctatcgaagtatttcacccgagtgggtggatagaaaaggcggtga  11749700                                           <------NtERF2                                           --------->At5g28300                                         <---------DEAR3(1)                                         --------->ALFIN1                                         <---------ANAC46                                        <------NtERF2                                        <---------ABI4(1)                                      <---------DEAR3(1)                                  --------->ALFIN1                                  --------->DAG2                                        <---------ANAC46     ------>NtERF2               --------->DAG2                                         <---------ANAC58    ----------->HVH21      ----------->GT1----------->GT1             --------->YAB1    <---------ANAC58    --------->DEAR3(1) <---------ATHB12 --------->ATERF1(1)  ---------->ID1          --------->DAG2 ------>ARR10        --------->MYB52(1)<---------ATERF1(1)  <-------GAMYB --------->GLK1(1) -DEAR4(2)          <---------WRKY12  --------->ALFIN1     <---------MYB46(3)       ---------->DOF2 ->At5g28300   <------ZmHOX2a(1)---------->DOF2        *TSS--------->MYB52(2)    --------->AHL20(2)   gagtctccgacgttgaaggaggccaacgatggagaaaagggaggcggtgaaaaacaagtgtttgttgttttatcagatttcaaataaaaagcgtgttgtt  11749800                                                                                        --------->ANAC46                                                                                        --------->ANAC58                                                                                        --------->ANAC58                                                                                       <---------ZAT18                                                                                     <---------ZAT18                                                                                     <---------ZAT14                                                                                     --------->ZAT14                                                                                 --------->GLK1(2)                                                                                 <---------ARR14(2)                                                            <---------DAG2       --------->ARR14(2)                             <------NtERF2               <-----------GT1  ---------->DOF2                      <---------ICU4         <---------At4g35610         --------->AHL20(2)     <----                --------->TOE2(3)            --------->At4g35610         <---------AHL20(2)    <-----   ttcaagttttacttaaatccataaacatcgcgtcgttttacttatacagatgcgaatagaaaccttttcccaaatttaaagagaaactgcacgctattta  11749900                     ---------->ID1                    <-------GAMYB                  <---------MYB59                   --------->MYB52(2)           <----------ID1                   <---------MYB46(3)      <---------AHL20(2)        --------->ANAC58                  <---------AHL20(2)                    <----------DOF2     -        --------->ANAC58                  --------->AHL20(2)                --------->ANAC58       <- -------GT1      <---------MYB52(1)   --------->AHL20(2)             --------->ATERF1(1) --------->ICU4 ------GT1  --------->MYB52(1)        <---------AHL20(2) --------->ZAT18    --------->ANAC58---------   actcatatagaagccaactgtttgttgttcttcttagtttttaattaaatgggccaaactggactatatgggcctcccaagcctttgagcagtaatgaac  11750000                                                                                    --------->bZIP60(1)                                                                                    --------->O2                                                                                    <---------ANAC46                                                                                    <---------ANAC58                                                                                    --------->TGA1a                                  <---------ANAC58                                  --------->ANAC55(2)                                  <---------ANAC58                                  <---------ANAC55(2)                                  --------->TGA1a                                   <---------TGA1a             ------->TEIL         <---------ANAC46                                  <---------bZIP60(1)         <---------TOE2(3)        <---------TGA1a                                   <---------ANAC58    --------->ATHB12              <------NtERF2                                  ----------->HVH21 <-   <---------YAB1                ------>NtERF2                                 <----------DOF2  <---- --------->YAB1                 <---------ANAC46                               ===============bZIP_DOF <------ZmHOX2a(1)          --------->DEAR3(2)   ------>ZmHOX2a(2)         --------->ANAC58     <---- ---------->GT1--------->YAB1 <---------DEAR4(2)<------ZmHOX2a(2)          --------->ANAC58  ------>ZmHOX2a(1) --------TOE2(3)          <---------ARR14(2)   --------->ARR14(2) <-----------HVH21 <---------O2<---- >ICU4<---------WOX13(1)  --------->ARR14(2) <---------YAB1      --------->ANAC46--------->WRKY12  <-   aaaggataattgacgaatcgtaagcgcaaaaccggcgcgtgagtatcacgatcggtttctgtgaaacacatcagagcaagcctttgacgtgattcctggc  11750100                       --------->HSFB2a(1)                       <---------HSFC1(2)                       <---------HSFB2a(1)                       --------->HSFC1(2)               --------->ARR14(2)             --------->LBD16           <-----------------AG           <---------LBD16           ----------------->AGL1           <-----------------AGL1           ----------------->AGL2           <-----------------AGL3                                                             -------        <---------GLK1(1)   --------->HSFB2a(2)                                               <------        --------->GLK1(1)   <---------HSFB2a(2)                                             ------->PIF5 -----MYB83<-----------------AGL2                       <---------YAB1                      <-------PIF5 -----ANAC58--------------->AGL15                     --------->CCA1(2)                 --------->TOE1(2) -----ANAC46----------------->AGL1                   <---------ARR14(2)               <------ZmHOX2a(2) -----ANAC58<---------------AGL15             ---------->DOF2 --------->ARR11(3)      --------->PCF2 -----MYB46(1) <---------ARR14(2)          ------>ZmHOX2a(2)  <---------ARR11(3)     <---------ARR14(2)   ttggtctctgatttcccgatttggaaacttctcgataacctctgatccaaaagacgatatgagagctcttcttgcagtctccaagtcgatcccacgagct  11750200                                                                                 --------->CCA1(2)                                                                                 --------->ARR14(1)                                                                                 --------->GLK1(2)                                                                                --------->ARR11(1)                                                                                <---------GLK1(2)                                                                                <---------ARR14(2)                                                                          ------>ZmHOX2a(2)                                                                         --------->At4g35610                                       --------->At4g35610              --------->ARR11(3)                                       --------->ZAT2                  --------->YAB1                                       <---------ZAT2                 <---------ATHB12                                       <---------At4g35610            --------->ICU4                                    <---------At4g35610        <---------At4g35610                                --------->YAB1                 --------->At4g35610<-------TEIL                          --------->ARR11(3)              --------->bZIP60(1)   --------->ARR14(2)  - -->ZAT2                  <---------ARR11(3)              <---------bZIP60(1) ----------->ARR10     < ---ZAT2 --------->ARR11(3)<------ZmHOX2a(2)           ----------->HVH21<---------ARR11(3)      <----   tggaaatagaagagctggtcttcttcaagatcactgatagcagctccatgagagcatttgacatcatctgcaatgatctgaagattcggttttatgttca  11750300  Previous    Next  AGI:  At1g32490.1    Description:  EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase. similar to MEE29 (maternal effect embryo arrest 29), ATP-dependent RNA helicase [Arabidopsis thaliana] (TAIR:AT2G35340.1); similar to RNA helicase, putative [Arabidopsis thaliana] (TAIR:AT4G16680.1); similar to ATP-dependent RNA helicase, putative [Arabidopsis thaliana] (TAIR:AT3G26560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64476.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ74568.1); similar to RNA helicase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD01767.1); contains InterPro domain Region of unknown function D Range:  from: 11742034    to: 11749755    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g32500.1    Description:  ATNAP6 (NON-INTRINSIC ABC PROTEIN 6); protein binding. Identical to Protein NAP6, chloroplast precursor (NAP6) [Arabidopsis Thaliana] (GB:Q9LQK7;GB:Q8LCI4); similar to ATABC1 (ARABIDOPSIS THALIANA NUCLEOSOME ASSEMBLY PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT4G04770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63426.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69419.1); contains InterPro domain SUF system FeS cluster assembly, SufBD; (InterPro:IPR000825) Range:  from: 11749803    to: 11752086    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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