Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->ARR14(2)       <---------ARR14(2)      --------->ZAT2      <------NtERF2      <---------ZAT2      <---------At4g35610      --------->At4g35610     <---------ATERF1(1)  --------->ANAC46                                                                    --------->GLK1(2) -----------RAV1(2)                           --------->YAB1                      <---------ANAC55(2) ------ANAC58               ------>ZmHOX2a(1)<---------ATHB12             <-----------HVH21 ------ANAC58   --------->YAB1        --------->AtLEC2        <---------AHL20(2)  --------->ANAC55(2) --MYB52(1)     --------->ANAC46      ------>ZmHOX2a(1)  <-------TEIL    <----------DOF2     ------>ZmHOX2a(2)   cttcaggcagctccacaaacacaacttctcctaaatggtcctgcacaatcatcgacatatacatataatctctctctttcagacacataatctgatctaa  11739900                          --------->TOE2(2)              ----------->RAV1(2)                          --------->TOE1(2)   <---------------AGL15              <---------ATHB12                         <---------ANAC58     --------------->AGL15            ------>MYB46(1)                         ----------->RAV1(2) ----------------->AGL2            ------>MYB83                         <---------ANAC58    ----------------->AGL3           <---------ALFIN1                       <-----------GT1       ----------------->AGL1          <---------MYB55(2)                     XXXXXXXXXXXXXXXXXXXX>MIR4239 <---------REM1(1)       <-----------GT1--------->ARR14(2)                  <----------DOF2  <-----------HVH21     --------->At4g35610 --------->MYB46(3)             --------->MYB59   <---------AtLEC2   --------->YAB1 <---------RAP2.6(3)     <---------ARR14(2)   actagttctaagagttatgtctttgttacctgcgcatggtcagtgataccaattgtagcaactgagccttcatgtttcacccactcatgtgaatttgcat  11740000                                --------->MYB46(3)                               -------->P<---------GLK1(2)                  ---------->DOF2    ---------->DOF2                                            -----             <---------ALFIN1--------->MYB46(3)                      --------->MYB46(3)  <---------ANAC46       ------>ZmHOX2a(1)   --------->ANAC46                ------>ZmHOX2a(1)----------->RAV1(1) <----   acttaagtccttccaacacttaaaaccccaaacaaccactaaagaatttcagacaagagtcctaaaacagaaccaatgcaacatacaagttgtgtcaaga  11740100                        --------->At4g35610                     --------->HSFC1(2)                     <---------HSFC1(2)           --------->CCA1(2)          ----------->RAV1(2)           --------->ZAT2             --------->At4g35610         -------->P --------->ANAC58    --------->At4g35610        <---------At4g35610      <---------ANAC58  ----------->RAV1(2) <------NtERF2--------->CCA1(2)    <---------ANAC58      <---------ANAC58 --------->GLK1(2)<---------At4g35610     <------NtERF2 <---------ANAC58 ---->ARR11(3)      --------->ANAC58    <---------ZAT2----------->ARR10     --------->ARR11(3) -----ARR11(3)  <------ZmHOX2a(1)    ---------->DOF2<XXXXXXXXXXXXXXXXXXXXMIR773                     <   tgttgttttcttacctgaggagaagcatctggagatggagaaagctggcaagagatgagatttggaggcagaagaagagagcttgagagcatttgctgta  11740200                                                                                                  ---                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                                <----                                     --------->MYB52(2)                                 ---------->DOF2                          <---------DAG2                                     ----------->GT1   <-----                          <---------------AGL15                             --------->ALFIN1   ------         <---------GLK1(2)<----------DOF2                                --------->DAG2 <---------ZAT14      <---------ALFIN1   <-----------------AGL3                         ---------->DOF2 --------->ZAT14 ------ZmHOX2a(1)        <-----------------AGL2 <----------DOF2   ---------->DOF2    ----------->GT1<   gaggaagcccacattctcagtgccattcctttttctggtttgtttgtttactttgttttgagttttctcaaaggaaaagtgggaaaacagtaaagagaga  11740300         <---------YAB1       <----------DOF2      <---------ANAC46      <---------ANAC58      <---------ANAC58   <---------WOX13(1) <---------ICU4 --->ZmHOX2a(2) ---ZmHOX2a(2) ---->ARR11(3)                 <----------DOF2                                     --------->DAG2 ---->AGP1                     --------------------->WRI1                   <------NtERF2 -----ARR11(3)  <---------ANAC58                                    <-----------RAV1(1) ----------->HVH21 ----GLK1(1)    <---------ANAC58                               --------->TOE2(3)  ---------->DOF2 --->GLK1(1)    <---------ANAC46                           <------NtERF2  <---------ANAC46        <-- ---------YAB1 <---------TOE2(3)         *TSS       ---------->DOF2<---------TOE2(3)  --------->ALFIN1   tcttaattgcttttattgacgtttgtgttctatctttagatgtatggcagaaaacaaaggcctcatcttaatgttgtcgtcgaaaaaagtgtgacccaaa  11740400                                                                                                   --                                                                                                -----                                                                                                -----                                                                                               <-----                                                                                             --------         <-----------HVH21                  --------->YAB1                                  <--------  <---------HSFB2a(2)               ----------->GT1                                    <-------GAMYB  --------->HSFB2a(2)              --------->DAG2                                     ----------->GT1 --------DOF2                     ---------->DOF2     ---------->DOF2        --------->TOE2(3)<------   ctttctcgaccagtcagaaggttttgaatttgaacaaaaagtaaaatgaaaatgaataaagaaaccaaaaaaaaaaaaaacttaaacggggttatttcgg  11740500                                                   <------NtERF2                                                 --------->ETT(1)                                       --------->TOE2(3)     <---------At4g35610               --------->TOE1(3)  ---------->DOF2                      <---------DAG2                                        ======== --------->RAV1(1)                    ----------------->AGL1                                 -------- ---->PCF2                       --------->ANAC46<---------RAP2.6(2)                 <---------AHL20(2) ->NtERF2                        --------------->AtSPL8                              --------->AHL20(2) ------TCP11(1)              <----------DOF2    --------->RAP2.6(3)                 --------->ICU4 ->RAP2.6(3)              <---------TOE1(3)    <-----------HVH21               ----------->GT1 ---GT1                   <---------TOE2(3)   <-----------RAV1(1)            --------->ICU4  -------- ---RAP2.6(2) --------->ANAC46   --------------->AtSPL3                 ----------->GT1    <---------ALFIN1   cccacaaagctgataaacacaataacttgaggtttacggtaccttatagtgtcggccagaaattgaaatttagaaggtaatgagtaattaatcccacatc  11740600                                                                                    <xxxxxxxxxxxxxxxx                                                                                    <xxxxxxxxxxxxxxxx                                                                                    <xxxxxxxxxxxxxxxx                                                                                    <xxxxxxxxxxxxxxxx                                                                                   --------->ANAC58xx                                                                                   --------->ANAC58--                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                                  <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                                 <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                 <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                                <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                                --------->ZAT2    xxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                               xxxxxxxxxxxxxxxx>smallRNA(s)                                                                               <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                              <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                              --------->YAB1      xxx                                                                             <xxxxxxxxxxxxxxxsmallRNA(le3)                                                                             xxxxxxxxxxxxxxxx>smallRNA(i)                                                                             <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                            <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                            xxxxxxxxxxxxxxxx>smallRNA(i)                                                                            <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                           --------->WOX13(1)  xxxxxx                                                                           xxxxxxxxxxxxxxxx>smallRNA(i)                                                                          xxxxxxxxxxxxxxxx>smallRNA(i)                                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                          xxxxxxxxxxxxxxxx>smallRNA(s)             ------>ZmHOX2a(2)                                         --------->ANAC58 xxxxxxxxxxxxx            <------ZmHOX2a(2)                                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           --------->ARR11(3)                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           --------->ARR14(2)                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <-----------ARR10                                           xxxxxxxxxxxxxxxx>smallRNA(i)<-           <---------AGP1                                              --------->ANAC58 xxxxxxxxxxxxx           <---------ARR11(3)                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <---------ARR14(2)                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          <------ZmHOX2a(1)                          <-----------GT1  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <----------DOF2                             --------->AHL20(2)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->ARR11(3)                             --------->ICU4     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------ARR11(3) ----------->GT1             <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxx ==============bZIP_DOF                       <----------DOF2  <----------DOF2xxxxxxxxxxxxxxxxxxxxxxx ->O2   <---------TOE1(3)                   <---------ZAT18   <---------ANAC58<xxxxxxxxxxxxxxxxxxxxxx ->TGA1a<---------TOE2(3)                   --------->ZAT18   <---------ANAC58<---------ICU4 <xxxxxxx   ggagaactttaaggatctaatctagtatataagaagcatgagttagtgcattaattaacaattggcttttagcaagacaatcagcacggacattgtttaa  11740700                xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)             ---------->DOF2             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       ---------->DOF2 xxxxxxxsmallRNA(si3) xxxxxxxsmallRNA(fl3) xxxxxxxsmallRNA(se3) xxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----->MYC3  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxsmallRNA(i2) xxxxsmallRNA(fl3) xxxxsmallRNA(le3)         ---------->DOF2 xx>smallRNA(si3)   xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxxx>smallRNA(l2) xxxsmallRNA(le3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                    <---------HSFC1(2) x>smallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     --------->HSFC1(2) xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                   xxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxx>smallRNA(le3)        ---------->DOF2                     <-----------HVH21 xxxxxxxxx>smallRNA(se3)  <------ZmHOX2a(1)     <---------AHL20(2)        <xxxxxxxxxxxxxxxxsmallRNA(i) ------MYC3--------->ARR11(3)--------->ANAC58  <---------AHL20(2)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxx>smallRNA(fl3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)         --------->DAG2<xxxxxxxxxxxxxxxsmallRNA(fl3) xxxxsmallRNA(se3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              ---------->DOF2--------->At4g35610 >smallRNA(fl3)----------->GT1       <----------DOF2           --------->At4g35610--------->YAB1  xxx xsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  ---- xxxxxxxxxxxxxxxxsmallRNA(i2)--------->ANAC58  --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   acgtggaataaaagataaagaaaaacgaggaaagctagactttaaagaataaaattttctaactcagaagaaaaagcgggtcactcatcagaagtgtcca  11740800  Previous    Next  AGI:  At1g32470.1    Description:  glycine cleavage system H protein, mitochondrial, putative. Identical to Probable glycine cleavage system H protein 2, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q9LQL0); similar to GDCH (Glycine decarboxylase complex H) [Arabidopsis thaliana] (TAIR:AT2G35370.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76620.1); contains InterPro domain Single hybrid motif (InterPro:IPR011053); contains InterPro domain 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016); contains InterPro domain Glycine cleavage H-protein; (InterPro:IPR002930) Range:  from: 11739284    to: 11740341    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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