Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------AHL20(2)                   <---------YAB1                  --------->AHL20(1)                 <---------AHL20(2)                 <---------ICU4                 --------->ATHB51                 --------->AHL20(2)                --------->ICU4                <---------YAB1   --------->YAB1           --------->YAB1       <---------YAB1           ----------->GT1   <---------AHL20(2)                                  --------->DAG2          <---------YAB1     --------->AHL20(2)                           ---------->DOF2        <---          <---------TOE2(3)  --------->AHL20(1)                    ------------------------>ANAC81 <x ------>AHL20(2)XXXXXXXXXXXXXXXXXXXX>MIR830                 ----------->GT1 <----------ID1   -------- -->ICU4  <---------TOE1(3) --------->AHL20(2)  --------->AHL20(2)--------->YAB1---------->DOF2<-----   ttatatgtttttatggtaattattttaaaaaaaaattatagcaaaacaaactaaatatgtataagtaaaaataagaaaaagaaaaagtaagttttgtctt  11711700                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                            ==================================================MADS_MADS                                            <---------------AGL15                   --------->YAB1                         ----------->GT1    --------------->AGL15     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       --------->ANAC55(2)     ---------->DOF2       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------AHL20(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <- ------AHL20(2)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)---------->DOF2     --------------->AGL15<- xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    <-----------GT1         <- -->ID1<---------ANAC55(2)   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) -----DOF2xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)           <-   tatttgattacatgacaaaacaagagaaggttataaaggtcatttacaaattagagaagaaaaagaaatgtgtctattctccatatttataaaaaaaact  11711800            --------->AHL20(2)            <---------AHL20(2)                          <---------AHL20(2)           --------->AHL20(2)                          --------->AHL20(2)           <---------AHL20(1)                       <--------HAHB4           <---------AHL20(2)                       --------->ATHB12   <---------DAG2                           <---------ARR11(3)                        <-----------GT1   <----------DOF2          --------->ARR11(3)      --------->YAB1               --------->YAB1  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)       --------->ARR11(3)                  <---------YAB1 ------>MYB46(1)            <-----------ARR10       <---------ICU4             --------->AHL20(2) ------>MYB83               --------->ARR14(2)     <---------ATHB12           --------->YAB1   ------ --------MYB46(2)       --------->DAG2     --------->CCA1(1)             <---------DDF1        ------ --------MYB59<---------YAB1<---------ARR14(2)--------->TOE2(3)          ----------->RAV1(1)   ------ --------MYB111(2)     ---------->DOF2     --------->RVE1(1)            --------->DREB2C(2)<--------- --------MYB111(1)----------->GT1--------->ANAC46--------->WOX13(1)    --------->DEAR3(2) <----------DOF2   acctactttacaaattatttttgtaaaaagtatctacttcacaaaatatctcaatcatttaatctgattttagaccgacattataatcttacctttcaca  11711900                                                                                   --------->CCA1(2)     <-------TEIL                                                                 --------->ARR11(3) --->ANAC58                <-----------GT1                                        <---------ARR11(3) --->ANAC46             <---------------AtSPL8                 <---------------AGL15 --->ANAC58             --------------->AtSPL8   <----------DOF2           ---------->DOF2     <----- --HVH21      <---------MYB46(3)         --------->TOE2(3)     --------------->AGL15--------->AHL20(2)   caacaaattcgttcatttgttgaaattttgtacatttccatttcattaaaactttatagtatatactataaacagacaaaagaagatataatataaactt  11712000                                                                                    --------------->AGL15                                                                         ------>MYB83                                                                       --------->MYB46(3)                                                                       <---------MYB111(1)                                                                       <---------MYB111(2)                                                                       <---------MYB59                                                                       <---------MYB46(2)                            <-----------GT1                     ------->GAMYB       <---------------AGL15                       <---------ARR11(3)                      <------------AtMYB77------------>CBF                       <---------AHL20(1)               <---------ANAC46 ------>MYB46(1)                       --------->AHL20(1)             <-------TEIL --------->ETT(2)----------------->AGL2                  ----------->GT1                     <---------ZAT14 --------->ANAC46 --------->ARR14(2)    --------->ARR11(3)     <-----------RAV1(2)  <---------ETT(2)----------------->AGL3 -----DOF2   <---------TOE2(3)           ----------->HVH21   <-----------GT1   <---------MYB52(2)----   ttgtatatgcgaatttaggtgagaaaatattcactggttctctctgactcagagggttcagtgtaactgtctaccaaacaaacaaaccaatagaagaaac  11712100                            <---------ALFIN1                                                       --                          <---------ALFIN1                                                         <-                          <---------ATERF1(1)            ------>ZmHOX2a(1)              <---------ANAC46                        ------>NtERF2               <---------GLK1(1)                  <---------At4g35610                       <---------ALFIN1             <---------At4g35610      <---------At4g35610  <--                       --------->DEAR3(1)     --------->At4g35610            --------->At4g35610<----                       --------->ANAC46   *TSS------>ZmHOX2a(1)   <-----------RAV1(2)<--------------- ----->AtMYB61   <----------DOF2------>ZmHOX2a(1)  ------->TEIL  ------>ZmHOX2a(1)   <---------RAP2.6(2)   caaaaccctctctctctctctttctccgcccctccttctctgtctctcctctgcatctcctctgttcctcaggtttctctgctcatggctgcttatggtc  11712200                                                                                              -------                                                                                             <------NtERF2                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                            <--------                         ------>ZmHOX2a(1)                                                  <--------                       =========================HOX2a_HOX2a                                 <--------                       ------>ZmHOX2a(2)                                                    <--------                      <------ZmHOX2a(2)                                                     <--------                     --------->ARR14(2)                                                     ------>NtERF2       <---------HSFB2a(2)   <---------GLK1(2)                                             <---------DEAR3(1)      <---------LBD16<---------ARR11(3)                                                    --------->DEAR3(1)     ------>ZmHOX2a(1)==========================HOX2a_HOX2a                                <---------RAP2.3(2)     =========================HOX2a_HOX2a                                                 --------->ATERF1(1)     <---------LBD16 <---------ARR14(2)                                                  <---------RAP2.3(1)     ========================HOX2a_HOX2a                                                 <---------ATERF1(1) ------->ARR14(2)    <---------GLK1(2)      --------->LBD16                     <---------ZAT14 ----------ARR10     --------->ARR11(3)    --------->HSFB2a(2)                  --------->ZAT18 <---- -------CCA1(2)    ----------->ARR10       <---------HSFB2a(2)             --------->LBD16--------->RAP2.3(1) -----WRKY38(1)  <---------ZAT14         ------>ZmHOX2a(1)      <-----------HVH21--------->ZAT6------ --AGL2--------->HSFB2a(2)<-----------RAV1(2)    --------->ATHB12        <---------LBD16<---------DEAR3(1)   aaatctcctcgggaatgactgtagatcctcaggttctctcttcctccagaaacattggagtttccctatcacctctccggagaacactaatcggcgccgg  11712300  <------MYB46(1)  <------MYB83 --------->MYB46(2) --------->MYB59 -->DEAR3(1) ->ATERF1(1) --LBD16 ->RAP2.3(1)             <---------WRKY12                              --------->LBD16 -ATERF1(1)             <---------MYB52(1)                           <---------LBD16 -RAP2.3(1)            --------->LBD16                 --------->ARR11(3) -ERF1                 <-----------HVH21            --------->AHL20(2)--------->RAP2.6(2) -RRTF1(1)            --------->ANAC46              <---------AHL20(2)--------->ANAC46 -RAP2.6(1)  <---------ARR11(3)          <---------MYB52(1)       <---------GLK1(1) --NtERF2    --------->ARR11(3)         <-------GAMYB  <---------ARR11(3)      ---------->DOF2      - --->LBD16  <---------CCA1(2)           <-----------HVH21    --------->LBD16 --------->TOE2(3)-------   agttaggtctactagtatctctctccgtcaatgttctctctccgttagatcgattaaaatctccgaagatagccgcaaacctaaagcttatgcagagaac  11712400               ----------->GT1          --------->ALFIN1                                                   --------->ANAC55(2)          ----------------------->TaNAC69(2)                               <-----------GT1        ---  <----------DOF2                                                       --------->MYB52(2)    <------ <---------ANAC58        ---------->ID1                           <---------ANAC46          --------- <---------ANAC58        <---------CCA1(2)       <---------WOX13(1) <---------ZAT6          <-------- -------->ABI4(2)   <---------ARR14(2)<----------DOF2             <---------ANAC58      <---------GLK1(2) -->MYB52(1) <---------ANAC46<----------DOF2 <---------MYB52(1)   <---------ANAC58<---------YAB1  <--   ggtgcttttgatgtggtgagtgaattcgtctctttttcttctttccccttaattgctaatttttgttttcgtgttagtcacgttctgtttgattctcttt  11712500 ------>HSFB2a(2) ----DOF2 ------>AGL15   <------ZmHOX2a(1)  <---------YAB1             <---------ARR14(2)            <-------- -------AGL15  <---------YAB1    <-----------GT1           <---------ANAC46                --------->ATHB12 -------HSFB2a(2)             ----------->GT1       <----------DOF2         <---------GLK1(2)<-------   atagaaaatgtcttattaggattcaatctgatttgttactattttgaatttggggtttattgtgtatagggagttttggattcttcatcatatagattgg  11712600  Previous    Next  AGI:  At1g32440.1    Description:  PKP3 (PLASTIDIAL PYRUVATE KINASE 3); pyruvate kinase. similar to PKP-BETA1/PKP1/PKP2 (PLASTIDIC PYRUVATE KINASE 1), pyruvate kinase [Arabidopsis thaliana] (TAIR:AT5G52920.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77706.1); similar to Pyruvate kinase isozyme G, chloroplast precursor (GB:Q40546); similar to hypothetical protein [Vitis vinifera] (GB:CAN81451.1); contains InterPro domain Pyruvate/Phosphoenolpyruvate kinase, catalytic core; (InterPro:IPR015813); contains InterPro domain Pyruvate kinase; (InterPro:IPR001697); contains InterPro domain Pyruvate kinase, C-terminal-like (InterPro:IPR015795); contains InterPro domain P Range:  from: 11712142    to: 11715092    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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