Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------ARR11(1)             <---------ARR14(2)             --------->ARR14(2)             --------->GLK1(2)       --------->ARR11(3)             --------->ARR11(3)      --------->ARR14(2)             <---------ARR11(3)      <-----------ARR10                                   --------->ZAT2            --------->GLK1(1)        <---------ARR11(3)                                  --------->At4g35610            <---------CCA1(2)       --------->CCA1(1)             --------->AtMYB61      <---------At4g35610        ------>ZmHOX2a(2)      --------->YAB1                  --------->ANAC46      <-----------HVH21 -------->ZAT6     --------->HSFB2a(2)                   --------->YAB1             <----------DOF2 ------->HVH21     --------->YAB1   --------->RVE1(1)   <-------TEIL        <---------ARR11(3) <-----   tgacactagatcgcaaatctttcagaattgtcaacataatatcttccttcgtctcatattcatcaacaccatcagcaatttcttcactttcagctctctt  11665600                       <---------ICU4                                   <---------ARR14(2)   ------>MYB83                       --------->YAB1                         --------->ANAC46               ------>MYB46(1)                     <---------KAN4(2)                      <-----------GT1             <-----------GT1      --------->ARR14(2)        <<<<<<<ZML2              --------->ARR14(2)          <----------DOF2      <---------ARR14(2)  --------->ZAT6   ------->TEIL  <---------ARR14(2)      <-----------GT1 -----DOF2------>ZmHOX2a(1)     <---------AGP1      ------>ZmHOX2a(1)   --------->ARR14(2) <---------MYB59   taactccgattcctcacaattcgaatgatcactagaactgtgatgaaacttctcctccatattcaccgaatgcgaattctgtttcacctttaacctactc  11665700                                                                                                <----                                                                                                -----                                                                                              <------                                                                                          <---------ANAC46                                                            ----------->HVH21            <------NtERF2                --------->YAB1                            --------->ANAC46              <---------ATERF1(1)               <---------ATHB12                           <---------O2                 <---------DEAR3(1)              --------->ANAC58                            --------->O2                <---------At4g35610              --------->ANAC58                    --------->ARR14(2)                  --------->ZAT2             --------->WOX13(1)                   <---------ARR14(2)                  --------->At4g35610           <---------ATHB12                      <---------MYB52(1)                   <---------ZAT2          --------->ANAC46                  --------->DEAR3(1)                      --------->ANAC46          --------->ANAC58               <-----------GT1 <---------LBD16            --------->ANAC58          --------->ANAC58       <---------At4g35610    <---------ALFIN1            --------->ANAC58          --------->AtLEC2       --------->At4g35610   <---------REM1(2)           <---------LBD16   <---------At4g35610      --------->ARR14(2)  --------->LBD16<---------TOE2(1)  <---------ALFIN1  -   --------->At4g35610      <---------ARR14(2)<---------LBD16  <---------TOE1(1) ------>ZmHOX2a(2)<--   aattcatcagccaagcaatcaacaacatcggattcagcaaaattcacctccggtttctccacgggacgaggttttgaatttgatccacggctgcgtcgat  11665800                                                                          <---------At4g35610                                                                        <-----------RAV1(2)                                                                       <---------At4g35610        <----------DOF2                                             --------->ZAT2 -----ARR14(2)             --------->ATHB12                         <---------At4g35610 ---->ARR14(2)           <---------KAN4(2)<---------WOX13(1)        --------->At4g35610 ---DEAR3(2) <---------TOE1(3)  <---------TOE2(3)              --------->DAG2                 <------ -------->LBD16    <---------ANAC46<---------ARR14(2)         ---------->DOF2         --------->LBD16 -------LBD16<---------TOE2(3)------>ZmHOX2a(2)           --------->ANAC46--------->At4g35610 <------   tccggtgagactttgaaggttttgtagaatgatcgaggttttggattggctgagaagtagacggaaaagctgctgcagatgataaatccgtcgaagtcgt  11665900                                                                          <---------MYB46(3)                                                                      <---------DEAR3(1)                                                                     <---------At4g35610                                                                 <---------REM1(1)                                                               <------NtERF2                                                               <-------GAMYB                                                              <---------MYB46(3)                                                             <---------ANAC46<---------ANAC58                                       <---------ARR14(2)   <---------LBD16  <---------ANAC58                                       --------->ARR14(2) <---------O2<---------RAP2.6(2)                                 <---------WRKY18(1)      --------->O2<---------RRTF1(3)                                --------->WRKY38(1)       <---------TGA1a<---------DEAR3(1)                                --------->WRKY12          =============MYC_MYB                      <                                --------->WRKY45          =============MYC_MYB    --------->GLK1(1)--                               --------->DOF5.7(2)      --------->MYB52(1)<---------DEAR3(2)      <--                              <-------GAMYB            ----------->HVH21<------NtERF2             <--        <---------At4g35610   ======================================MYC_MYB<-------GAMYB          <--   <----------DOF2           ------>ZmHOX2a(2)        <-----------TGA1<---------RAP2.3(2)<---------ALFIN1 ---ANAC58                   <---------MYB46(3)       <-----------HVH21<---------RAP2.3(1)      ----- ---ANAC58                  <---------YAB1<-----------GT1 --------->TGA1a<---------AtMYB61<---------At4g35610   gtcttctttctgatgctctgattttggatgatcgttgactggattcacaatcccagcgtcacggcggatgtagcggcggtcgtgatttcttccactgcct  11666000        ------>ZmHOX2a(1) ---------MYB52(1)                                                           <----------DOF2 ------->LBD16                                                               <---------DAG2 -------ANAC58            ------>NtERF2                                  <---------ZAT18 -------ANAC46  <---------ANAC58                                         --------->ZAT18 -------ANAC58  <---------RAP2.6(2)     <---------HSFB2a(2)        --------->TOE2(3) ->NtERF2       <---------ANAC58      *TSS   <----------ID1----------->GT1 ------->TEIL   ccgtgtgttcctctcatggcggtcttgcagccaagtttgggtccagagagacaaacaaactctgttaaatgttaatgcactttctctacttgacgaaaac  11666100               <-----------GT1                                                --------->MYB52(1)           <---------DAG2                                                     <---------At5g28300           <----------DOF2                                                   <-----------GT1         ------->TEIL                                                ----------->GT1                <     --------------->AtSPL8                                          <------MYB46(1)                <     <---------------AtSPL8              <---------TOE2(3)           <------MYB83                   <  --------->AHL20(2)                 <-----------TBP --------->LBD16--------->MYB59          <------ZmHOX2a(1)   aaaaaaaaatgtacttttttctacttatgttttttgggtttttatggattgtgtccgaaaaattccaagtttggtttatttaccggttcgatagaggaaa  11666200                                                          <---------ANAC55(1)               --------->ATHB12                     --------->ICU4              <---------YAB1                        --------->AHL20(2)   --------->YAB1                                 --------->YAB1                     <---------TOE2(3)   --------->TOE1(3)                          ---------->DOF2                        <---------YAB1   --------->TOE2(3)                  <---------WRKY45    <---------ANAC58         <---------ICU4 ------->TEIL --------->ICU4          <---------WRKY38(1) <---------ANAC58         -------->HAHB4 --------->GLK1(2)                    <---------WRKY12    <---------ANAC55(2)      --------->YAB1 <---------ARR11(1)                  <<<<<<<<<<WRKY18<--------HAHB4               --------->ICU4 --------->ARR14(2)                  <<<<<<<<<<WRKY62--------->YAB1               <---------ATHB51 <---------ARR14(2)                  --------->WRKY18(1)  --------->ANAC55(2)     <---------YAB1 ---------GLK1(2)       --------->LBD16---------->DOF2  <-----------GT1         <---------ICU4 ---------ARR14(1)    <---------LBD16<<<<<<<<<<WRKY40--------->ATHB51           <--------HAHB4 ---------CCA1(2)<---------WOX13(1) <-----------HVH21<---------ICU4            --------->ICU4   ccgaatcttaaataccatgattgaaccggagaagacttggtcaaagagaaaagaataattacgtttcatgttcacatttgcataattatggttccatatt  11666300                                                                                                xxxxx                                                                                                <----                                                                                                <----                                                                                              -------                                                                                            <--------                                                                                           --------->LBD16                                                                                          --------->ANAC46                                            <----------DOF2                               <---------ANAC55(2)                           <---------ARR11(3)                                         xxxxxxxxxxxxxxx                           --------->AHL20(1)                                         <---------HSFB2a(1)                  <---------ANAC58       <---------ALFIN1                             --------->HSFB2a(1)             --------->ATHB12          <------ZmHOX2a(2)                       <---------ARR14(2)            ------>ZmHOX2a(2)         --------->ARR14(2)                       --------->ARR14(2)     --------->ATHB12      <---------AHL20(1)                                  --------->GLK1(2)-----    <---------YAB1<---------ANAC58 <---------TOE1(2)   --------->ARR14(2)----------->GT1  --------->ANAC55(2)   tttagtatcattgatcgattgctggacaaaatattcgttcgatccactttgactcggtattcgatttgattcgatttgaaaaatccgaacatccgtaaga  11666400                                                                                             --------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)                                                                                         <---------ARR14(2)                                                                                         --------->ARR14(2)                                                                                       ----------->ARR10                                                                                    xxxxxxxxxxxxxxxx>smallRNA(s)                                                                                   --------->At4g35610                                                                               --------->KAN4(2)                                                                               <---------ARR11(3)                                                                               --------->ARR11(3)        --------->ANAC58                                                       --------->ARR14(2)        --------->ANAC58                                                       <---------ARR14(2)      ---------->DOF2                                                         --------->HSFB2a(1)  <xxxxxxxxxxxxxxxxsmallRNA(i)                                                <---------HSFB2a(1) xxxxxxxxxxxxxxxxx>smallRNA(si3)                                              --------->KAN4(1) -----ARR11(3)                                                                <----------TaMYB80 -----GLK1(2)                                                                 <---------GLK1(1) ---->ARR10          <---------ARR14(2)    --------->ANAC58                   <---------KAN4(1) -MYB52(1)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             --------->GLK1(1) xxxxxxxx>smallRNA(i2)         --------->YAB1   <---------MYB52(2)           ---------->TaMYB80   <-- ---->ARR11(3)    --------->AHL20(2)       --------->ANAC58                  <---------KAN4(2)    ---   ttttggagcaaagcaaataagaaaatatggtattcataaaaatcgaagcaaataacaaatattgttttttaaaaaatcgaatatccgcttcgatccgtat  11666500  Previous    Next  AGI:  At1g32340.1    Description:  NHL8 (NDR1/HIN1-like 8); protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G14250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63374.1); contains InterPro domain RWD (InterPro:IPR006575); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 11663050    to: 11666038    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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