Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------DAG2                                                       <xxxxx                    ------>MYB83xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        ---------                    ------>MYB46(1)                                                       <---------WRKY12                    --------->ANAC46                                                      <---------WRKY38(1)                  --------->AtMYB61                              --------->AHL20(2)      --------->WRKY18(1)                  <---------MYB59<-----------HVH21      --------->AHL20(2)              <--------ZAP1                  <---------MYB111(1)                  --------->AHL20(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     --------->ANAC58     <----------DOF2             ------------------------>ANAC81   <-----------HVH21     --------->ANAC46    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->AHL20(2)     <---------DEAR3(2)     --------->ANAC58 --------->MYB46(3)           --------->AHL20(2)  <----------ID1 --------->ETT(1) ----->AHL20(2)   <---------MYB46(2)   --------->HSFB2a(1)  --------->AHL20(2)        <---------DREB2C(2)   aaaatccactcaaaccgataccaaaccactttatatgtcaaaccttcttaaaaaaaaataaaaaaaataaaaaaaaacaaaattgttgtcggtcaaacgg  11661400                                     --------->ZAT18                                     <---------ZAT18                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                  ---------->DOF2                             <xxxxxxxxxxxxxxxxsmallRNA(s)                            <xxxxxxxxxxxxxxxxsmallRNA(i)                            <xxxxxxxxxxxxxxxxsmallRNA(s)                            xxxxxxxxxxxxxxxx>smallRNA(s)                           xxxxxxxxxxxxxxxx>smallRNA(s)                           <xxxxxxxxxxxxxxxxsmallRNA(i)                    --------->ARR11(3)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            <---------ARR11(3)                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               ----------->ARR10                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            ---------->DOF2                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)              <xxxxxxxxxxxxxxxxsmallRNA(i)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          --------->LBD16                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          --------->LBD16                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          --------->ANAC46                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          --------->HSFB2a(2)                     --------->bZIP60(1)        xxxxxxxxxxxxxxxx>smallRNA(s)                     <---------TGA2(1)          <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                     --------->TGA2(1)        xxxxxxxxxxxxxxxx>smallRNA(s) <---------GLK1(2)                     <---------bZIP60(1)     <---------ICU4        <---------HSFB2a(2)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <------NtERF2                    xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             --------->LBD16                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <---------LBD16                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxsmallRNA(s)                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxsmallRNA(i)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxsmallRNA(s)              -----                <---------ICU4 <xxxxxxxxxxxxxxxxsmallRNA(s) <---------At4g35610                 -----                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxsmallRNA(s)        --------->AHL20(2)         <---------YAB1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<-----------ARR10          <---------AHL20(2) xxxxxxxxxxxsmallRNA(i)xxxxxxxxxxxxxxxx>smallRNA(s) <xxxxxxxxxxxxxxxxsmallRNA(i)  <---------HSFB2a(2) >MYB52(1)--------->YAB1<---------ICU4     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)    --------->HSFB2a(2)   tctatttctccatgataactatgacatcatgccagatagagccctaagtatgaccacaatccagatgtccccgaaaagatacttctcgatttatatttcc  11661500                                                                                               <xxxxx                                                                                               <-----                                                                                               <xxxxx                             <---------AHL20(2)                  --------->YAB1                <-----                            <---------AHL20(1)               ----------->GT1                <--------                            <---------ARR11(3)           ------>MYB83                    ------>MYB83                           <---------CCA1(2)             ------>MYB46(1)                 ------>MYB46(1) ------------>AG <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->AtMYB61               <---------MYB59 ------------>AGL1      --------->LBD16                <---------MYB59    --------->AtLEC2 <---------ATHB12   caaaatcgatagttttcatctatttccccatatatttgggtttaatcggttttctgaccaaacccgataaaaatccattcaaactgataccaaatcactt  11661600                              ------------------------>ANAC81                             xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                            xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                            xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                           xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                           xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                          xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                         xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                         xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                        xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                       xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                       xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                     xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                    xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <-----------HVH21 xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                            <- xxxxxxxxxxxxxxxxxxsmallRNA(s2)                   <------------CBF                             <----- -----DOF2         xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                       -------- xxxxxxxxxxxxxxxxxxsmallRNA(si3)           <----------ID1      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ----DAG2          xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     <---------DREB2C(2)           <---------GLK1(1) ---GT1           xxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <-----------RAV1(1)              --------->GLK1(1)   tatatgtcataccttcttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaaattgctgtcggtcttgtcttctccattcttcccatagaattccagat  11661700                                              <---------ANAC58                                              <---------ANAC46                                             <---------MYB46(3)                                         <---------YAB1                                   <---------WOX13(1)             <<<<<<<<<GATA-2                                  <------------CBF                <<<<<<<<<GATA-4           <--------                                  >>>>>>>>>ARR2  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     <---------TOE2(3)   <---------AHL20(2)            --------->ATHB12<-------GAMYB    <<<<<<<<<GATA-3       <---------MYB52(2) --------YAB1        <-----------GT1<---------MYB46(3)      <----------DOF2        <---------ANAC58<- ----GLK1(2)    ----------->GT1 <---------YAB1<---------ANAC58    <<<<<<<<<GATA-1 ---------->ID1 ---- ->LBD16   --------->AHL20(2) <----------DOF2--------->MYB55(2)  --------->ARR14(2)<---------ANAC58--   tatgtttatttgaaaaaatagtttatctctctctttgattgttacgatgggtgttagatttactttgaatccacatacaaatttgtcgtaactaatgaag  11661800                                                         <xxxxxxxxxxxxxxxxsmallRNA(s)                                                        --------->WRKY38(1)                                                        --------->WRKY12                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                             <---------DOF5.7(2)                                           --------->DOF5.7(2)             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                               <---------WOX13(1)xxxxxxxxxxxxxxxx>smallRNA(s) -ATHB12---------->DOF2     <---------YAB1--------->TOE2(3)         <xxxxxxxxxxxxxxxxsmallRNA(i) --------ARR11(3)    --------->ANAC58     --------->TOE1(3)        xxxxxxxxxxxxxxxx>smallRNA(i) ----- ------->ARR10       --------->ANAC46     <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         --------->GLK1(2) ------->ARR11(3)    --------->ANAC58   <---------TOE2(3)<---------WRKY18(1)      <---------TOE2(3)   agatattcaacaaagcattttaaacgcattctaattgctaataacgttaacatcgacattgacctgaaaactggaatcgttgctaagaatatggctaaga  11661900                                                                                   <---------AHL20(2)                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(2)                                                                                 <---------YAB1                                                                               -------->ATHB1                                                                               --------->ATHB51                                                                               <--------HAHB4                     --------->LBD16                                           <---------ICU4                   <---------LBD16                       --------->AHL20(2)    --------->YAB1               <---------At4g35610                      <---------ATHB12       --------->AHL20(2)      <------ZmHOX2a(2)                             ------->GAMYB             <---------ATHB51     --------->ARR11(3)        <-----------GT1    -------->P                  <---------ATHB12     <---------ARR11(3)    ------->TEIL         --------->MYB46(3)     <---------ARR11(3) ----->DOF2    --------->At4g35610        ---------->DOF2<---------AHL20(2)   --------->ICU4  <------   aagagaagatcaaggtgagcttccgcatgaattttacaattcacaaaagaacaacccaattaaacaaaatcaacatctcaattattaaataagttttatc  11662000                                                      --------->ANAC46                                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                --------->YAB1                                               --------->ICU4                    <xxxxxxxxxxxxxxxxsmallRNA(s)                                          --------->LBD16    <xxxxxxxxxxxxxxxxsmallRNA(i)                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    XXXXXXXXXXXXXXXXXXXX>MIR169G*                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     --------->YAB1                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <---------ATHB12                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->ANAC58        <xxxxxxxxxx                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --------->ANAC58    --------->ETT(2)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)   --------->WOX13(1)   <---------ETT(2)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<<<<<<<<<<<<<< -----GT1     <----------DOF2        --------->WOX13(1)----------->RAV1(1)    --------->WOX13(1)   caattctattactgttctttcaattgctcatcttaaaatcaatctgggaattataaacaccagaaaacaatcaacacaatccatcaagtcgacaatggct  11662100                                                                --------->ARR11(3)                                                                <---------ARR11(3)                                                               <------MYB46(1)                      <                                                            <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     xx                                                         --------->ALFIN1                      ------                                                ----------->GT1<------MYB83                   xxxxxxx                                             <---------ANAC46<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)xxx                                <---------ANAC55(2) --------->ICU4                           xxxxxxxx           --------->WOX13(1)   --------->ANAC55(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      xxxxxxxx    <---------ZAT6--------->HSFB2a(2)       <---------MYB46(3)<---------AtMYB61            xxxxxxxxxx xxxxxxsmallRNA(i)<---------HSFB2a(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)             xxxxxxxxxxxxx <<<LFY  <---------YAB1     ------->TEIL   xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     --------->YAB1 <--   gattcagtgttatcaatcttctacaaaatgaatcaagtgatttcaatgggtggaataatgtgggaaggtctcaattcgagtttaatcaaaatcgatgaag  11662200                         --------->At4g35610                 <xxxxxxxxxxxxxxxxsmallRNA(i)                 xxxxxxxxxxxxxxxx>smallRNA(i)                ======================HOX2a_HOX2a                ------>ZmHOX2a(2)               <xxxxxxxxxxxxxxxxsmallRNA(s)               --------->CCA1(2)               =======================HOX2a_HOX2a               <------ZmHOX2a(2)              --------->AGP1              <---------ARR14(2)              <-----------ARR10              --------->ARR14(2)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)             xxxxxxxxxxxxxxxx>smallRNA(s)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <---------GLK1(1)             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)             --------->GLK1(1)            ----------->ARR10           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          xxxxxxxxxxxxxxxx>smallRNA(i)          <---------At4g35610          --------->At4g35610         ----------->RAV1(1)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <---------At4g35610     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <xxxxxxxxxxxxxxxxsmallRNA(s)  <---------ANAC58    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <---------ANAC58  <xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxx>smallRNA(s) ->TEIL--------->At4g35610                 ----------->GT1 xxxxxxxxxxxxxxx>smallRNA(i2)            ----------->GT1      <------ZmHOX2a(1)            <---------YAB1 xxxxxxxxxxxxx>smallRNA(s)           ---------->DOF2     --------->CCA1(2)               --------->YAB1 xxxxxxxxxxxxxxx>smallRNA(fl3) <------ZmHOX2a(1)        --------->ARR11(3)      ----------->GT1 xxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxsmallRNA(s)       <---------ARR11(3)     --------->DAG2  ------ xxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            ---------->DOF2--------- xxxxxxxxxx>smallRNA(si3)<---------At4g35610        ---------->DOF2   ----------->GT1<---------YAB1 --------DOF2--------->At4g35610------------------------>ANAC81   >>>>>>>>>TBF1<---------TOE2(3)   ctttgcttaagcagcagatccgagcggagatgaggaataaaaagagagaaaaaaaaaagatataggaagaagaagtaaaaaaaggttatatttatgatta  11662300  Previous    Next  AGI:  At1g32337.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G46390.1) Range:  from: 11661795    to: 11662102    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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