Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                     <-----------GT1                                            -----                                    <-----------GT1                                           -------                            <----------DOF2                                                   <------ ----ANAC55(1)              <---------DAG2                                                   -------- ----ANAC58              <---------DOF5.7(2)                                                 <------- ----ANAC58            <---------MYB52(1)                                                  <---------GLK1(1) --->ANAC55(2)         --------->DOF5.7(2)                                     --------->CCA1(2)<---- ----ANAC55(2)        --------->TOE2(3)                                <---------ZAT6      --------->GLK1(1) ----ANAC46           --------->TOE1(3)          <----------ID1        ----------->GT1   <------ZmHOX2a(1)   tgttcttcacaaatgtcactaaaacgttaactttatattttcccattgtaagggacaaaatagtatttctatggtgttaatatacaagtgaggaaatcat  11654700                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                 ----   <---------At4g35610                                                                           <--- ------ICU4                                                                                   ------- ---->ICU4                                                                                    ------- -->YAB1                                                                                      <------ ---ICU4                               <---------GLK1(2)                                      <------ ->ICU4 <---------ATHB12               --------->ARR14(2)              ---------->DOF2       -------- --ATHB12           <---------------AGL15                          --------->YAB1            -------- -----YAB1          --------------->AGL15                       <----------DOF2      <---------TOE2(3)   tattcggctaatgagtctattactcgaaaatgaaatttcaatattctcaagaatatagataatcaactttcatcaaagacaatttttaagtttgaataat  11654800                                                                                 --------->YAB1             <---------RVE1(1)                                                  <---------YAB1  <---------AHL20(2)                                                           <-----------GT1 --------->AHL20(2)                                                           --------->YAB1 <---------AHL20(2)                                                          --------->ICU4 -------AHL20(2)                                                        <------MYB83 ------>AHL20(2)    <---------ANAC58                                    ----------->GT1 ------AHL20(2)     <---------ANAC58                                    <------MYB46(1) ----->AHL20(2)   <-----------GT1                                      <---------TOE2(3) ------AHL20(1)  <<<<<<<<<<GT-3b                                       --------->MYB59 -->YAB1     <---------CCA1(1)                  --------->AHL20(2)--------->AHL20(2) -->ATHB51  --------->ARR11(3)                  <---------YAB1    --------->AHL20(1) ---ICU4    <---------ARR11(3)                  <---------AHL20(2)<---------AHL20(2) --HAHB4    <---------ARR14(2)               <---------DAG2<----------DOF2   <---------YAB1         - ->ICU4   --------->LBD16                    <----------DOF2     --------->AHL20(2)                <- ->AHL20(2) --------->ARR14(2)         --------------->AtSPL8    <---------AHL20(2)--------->At4g35610   taatttaaaatccagatatttttcttgattttttgtctaacttggtactttttattagttcctttaaaaaaattaggttattatcatcttcccaaaacaa  11654900                                            <---------AHL20(2)                                           --------->AHL20(2)              --------->ANAC58            <---------YAB1              --------->ANAC46          <--------HAHB4              --------->ANAC58          --------->ATHB51             ------->TEIL               <---------ICU4             <---------LBD16           <---------YAB1         <---------------AtSPL3        --------->ICU4                     <---------LBD16        ----------->TBP          --------->DAG2                      <---------AHL20(2)     ---------   <-----------GT1             ---------->DOF2                  <---------MYB59 ------------>CBF  --- -------->GLK1(2)      <---------------AtSPL8                  --------->ANAC55(2) <------------CBF --------GLK1(2)   ---------->DOF2----------->GT1            <-----------GT1 <------ZmHOX2a(1)    <--   agattctactatatgtacggaaaaagaagtaccaaaaggtcattattaaatcccaaaacttgtttacctatttttatcaggaatcaattgatcaccacta  11655000                                                                              ---------->ID1                                                                      <-------MYC3                                                                      ------->MYC2                                                                      ------->MYC3                                                                      <-------MYC4                                                                      <-------PIF5                                                                      <-------MYC2                                                                      ------->MYC4                                                                      ------->PIF5                                                                     --------->bZIP60(2)                                                                     <--------ABF1                                                                     <---------TGA1a                                                                     --------->TGA1a                                                                     <---------O2<----------DOF2                                                                     --------->O2------>ZmHOX2a(1)                                                    --------->ANAC46 <---------ANAC55(2)                                                    --------->ANAC55(1) <-----------HVH21                                         --------->O2                --------->ANAC55(2)         <---           <------------CBF              <---------O2                =======================bZIP_DOF     <----------ID1                <---------WOX13(1)                <<<<<<<<<<HY5             ------ >ZAT6--------->TOE2(3)      --------->ZAT6 <-----------HVH21        <<<<<<<<<<AtMYC2        -------- ------>TOE2(3)<---------ANAC58   <------------CBF  --------->ANAC58 <<<<<<<<<<ABI5          -------- -------MYB59  <---------ANAC58  --------->ATHB12   --------->ANAC58<<<<<<<<<<<<AtMYC2 --------->ANAC55(2)   cctaaaaaccacaaattgcttaagtttgttaacactgattgacaagtgtcatacaagtaatcccatttgccacgtgtcatgtcctttttatgtaacctag  11655100                                                                ------->TEIL                                                               --------->ARR14(2)                                                               <---------GLK1(2)                                                               <---------ARR11(3)                                                               <---------ARR14(2)                                                       --------->TGA2(2)                                                      <-----------TGA1                                                      <-----------HVH21                                                     <---------bZIP60(1)                                                     --------->bZIP60(2)                                                     --------->TGA2(1)                              -                                                     <---------TGA2(1)                              -                                                     --------->O2                                   -                                 ----------->HVH21   <---------O2                                   -                            --------->TOE2(3)        --------->TGA1a                                - ---ZmHOX2a(1)         <---------MYB52(2)            <---------TGA1a                               <- --->TOE1(1)      --------->ANAC58                   --------->bZIP60(1)                        <---- ->TOE1(2)        --------->ANAC58                   --------->ANAC46                  <---------ALFIN1 ->TOE2(2)        --------->ANAC46                  <-----------STF1    <---------ALFIN1       <-----   gacttgaaaaccacaagtgcaagcaaataacctagatgacacttgttagagaacgacgtcaccaagaacctctcacactctctattccaccacttattta  11655200         <---------DAG2       ------>NtERF2      --------->DEAR3(1)      --------->DREB2C(2)      <---------ALFIN1     --------->DEAR4(2)     --------->RAP2.3(1)     --------->ATERF1(1)     --------->DEAR3(2)     <------NtERF2     --------->ORA47(2)    ------>NtERF2    <---------ATERF1(1)   <---------ALFIN1  <---------ABI4(2)                                                         --------->HSFB2a(2) <-----------HVH21                                                          <---------HSFB2a(2) -------->bZIP60(2)                                                      ============================ -------->ANAC58                                                         ------>ZmHOX2a(2)         -- -------->ANAC58                                                        ============================= -------->ANAC46                     --------->ANAC58                   <------ZmHOX2a(2)          -- -------->O2                         --------->ANAC58                  <---------ARR11(3)      <----- --------LBD16        <---------At4g35610 ----------->HVH21    --------->TOE2(3)      <-------------- -----At5g28300 --------->LBD16    ---------->DOF2             --------->TOE1(3)      <-------------- ------GT1    <---------LBD16    <-----------HVH21--------->DEAR3(1)   --------->ARR11(3)     <------   ccacggcaccgccttctccgtggcatcttcttcatcgtcaagccctgaaacatcgccgattcaaaccttaaacgatctcgagaaactctccgttttagga  11655300                                --------->At4g35610                                <---------LBD16                                <---------At4g35610     <---------DEAR3(1)      ----------->HVH21     --------->ALFIN1       <-----------HVH21 =HOX2a_HOX2a               <-----------TGA1                                  --------->TOE2(3) <---- ------->ANAC58            --------->bZIP60(2)                              <-----------ARR10  ------ =HOX2a_HOX2a              --------->ANAC58                 ---------->DOF2<---------CCA1(2) <------- ------->ANAC58     --------->ANAC46                 --------->ANAC58  ------>NtERF2        <-------- -ZmHOX2a(1)     <---------ETT(2) --------->LBD16    --------->ANAC58 --------->LBD16       <-------- ---AG     <---------PCF2  --------->ANAC46          --------->ANAC46 ------>NtERF2       <---------- ---AGL1  ----------->HVH21--------->ANAC58      <----------DOF2    <---------LBD16--------->ANAC46 ----ID1--------->ALFIN1   --------->ANAC55(1)   <---------DAG2    ------>ZmHOX2a(1)  <---------ALFIN1   caaggaagcggtgggacagtctacaaaacccgtcaccggagaaccaaaacgctttacgccttaaaagtcctccggccaaatctcaacaccacggtcaccg  11655400     <---------RAP2.6(3)     ------>NtERF2     <---------DDF1 <-----------ARR10                                             <---------ANAC58    --------->DEAR3(1)                                                            <---------ANAC58    --------->RAP2.6(2)                                                           <---------ANAC55(2)   --------->DEAR3(2)                                 <---------MYB52(1)          <---------ANAC46  <---------At4g35610                                <---------RAP2.6(3)  ------>ZmHOX2a(2)  --------->At4g35610                    <---------AHL20(2)              <---------GLK1(1) -------HVH21       --------->GLK1(2)   <---------AHL20(2)               <------ZmHOX2a(2) --->DEAR3(1)  --------->ANAC58         --------->AHL20(2)    --------->MYB52(2)  --------->ANAC55(2) --At5g28300   --------->ANAC58       --------->TOE2(3)     <---------MYB52(1) <---------MYB52(1) -WRKY12     ---------->DOF2         --------->YAB1 <---------ANAC58    --------->ARR11(3) -WRKY38(1) ------>ZmHOX2a(1)        <--------HAHB4 <---------ANAC58    <---------ARR11(3) <---------At4g35610 -HVH21    --------->TOE2(3)        <---------YAB1  <---------ANAC46<-----------GT1    <---------REM1(1)   tcgaagccgacatcctcaagcgaatcgaatcgagttttatcattaaatgctatgccgtttttgttagtttatacgatctctgtttcgtgatggagcttat  11655500                     <-----------HVH21                    ----------->GT1                  <---------ANAC46               ----------->TGA1               ----------->HVH21        ------>ZmHOX2a(2)       --------->GLK1(1)       <---------GLK1(1)                                                                     <-------       <------ZmHOX2a(2)                                                        ------>ZmHOX2a(1)      --------->ARR11(3)                                                    --------->GLK1(2)--------      <-----------ARR10                                                     --------->ARR14(2)  -----      <---------ARR11(3) <---------ANAC58                                   <---------ARR14(2)  <----      <---------ARR14(2) <---------ANAC58                                  <---------GLK1(2)---------      --------->ARR14(2)--------->MYB52(2)            --------->YAB1    --------->YAB1     <---------ANAC55(2)     <------ZmHOX2a(1)<---------MYB52(1)       --------->ANAC46       --------->MYB52(1)   --------->ANAC55(2)   ggagaaaggatctctccatgacgcgttacttgctcaacaagttttctccgagccaatggtatcgagtctcgctaacagaatcctccaagggttacgttat  11655600  Previous    Next  AGI:  At1g32310.1    Description:  similar to unknown protein [Oryza sativa] (GB:AAL67597.1) Range:  from: 11653544    to: 11654774    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g32320.1    Description:  ATMKK10 (Arabidopsis thaliana MAP kinase kinase 10); kinase. similar to ATMKK9 (Arabidopsis thaliana MAP kinase kinase 9), kinase [Arabidopsis thaliana] (TAIR:AT1G73500.1); similar to double MYC-tagged mitogen activated protein kinase kinase 10 [synthetic construct] (GB:ABF55670.2); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 11655136    to: 11656053    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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