Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  ----------->GT1                                <---------ANAC58                                                    <                                <---------ANAC58                                                   <-                                --------->ANAC55(2)                                               <--  <---------ANAC46        <---------MYB46(3)                                                    <---- ----------AGL15      <---------ANAC46                                                          <---- ----->RAV1(1)        <---------ANAC58    <---------------AtSPL8                             <------- --------->AGL15      <---------ANAC58   ---------->DOF2      <-------MYC3                  ------>ZmHOX2a(1) ---------->AG<------ZmHOX2a(1) <---------ANAC55(2)           ------->MYC3                  <-------- -----------AGL2    ------>MYB46(1)--------->ATHB12  --------->ANAC58      ---------->DOF2------>ZmHOX2a(2) ---------->AGL1    ------>MYB83<---------ANAC46     --------->ANAC58---------->DOF2--------->CCA1(2)   cattgggggaagaataggaacctagcgtttgatggcgtgattagaaagtacaagaacgcaaacacgtttttgaaagtaaaagagagatttgatcctttag  11653100                           --------->GLK1(2)       <---------YAB1                         ------>MYB83           ----------->HVH21                       ------->GAMYB          ========================bZIP_DOF                       <---------MYB59        ========================bZIP_DOF                      --------->MYB46(3)      <---------ANAC55(2)                     ------>MYB83             --------->TGA1a                     -------->P<---------TOE1(2)----------->TGA1                     ===================================MYC_MYB ---------MYB46(3)   ------>MYB46(1)          --------->O2 -------P--------->ANAC46------>MYB46(1)      <---------O2 ---------->DOF2       <------ZmHOX2a(1) -----GAMYB        <---------MYB59            <---------TGA1a            <---------ANAC46 -----TOE1(3)      --------->AtMYB61          --------->ANAC55(2)        <---------ANAC58 -----TOE2(3)      <---------MYB111(1)==================bZIP_DOF         <---------ANAC58 --MYB52(1)        --------->MYB46(3) ---------->DOF2    <---------YAB1------->TEIL         <-------- --DOF2 <---------LBD16=================================MYC_MYB   <------ZmHOX2a(1) <----------DOF2   ggttgttttcgacggaatggaccaaccaaattctaggtttaaaaggaaacgtgacgattgtgaaagaaggatgtgccttggaaggactttgtgtttgttc  11653200                         ----------->GT1        ----------->GT1                      ---------->DOF2         ---------->DOF2                    --------->ANAC58     <-----------RAV1(2)             <---------ZAT18 --------->MYB52(2)--------->DAG2             <---------At4g35610     --------->WRKY38(1)      <---------YAB1--------->ANAC58 <---------ETT(2)                                               - -MYB46(3)   --------->At4g35610     --------->ETT(2)                         ----------->GT1      --   ggatgatgctcattgtgctcccaagaaaggttatttgtgtcgaccaggtaaagtttatacaaaggctagagtttgtactcatgtaaaatcagtaaatggc  11653300                 --------->AHL20(2)                 <---------AHL20(2)                --------->AHL20(1)                <---------AHL20(2)             ------>MYB83                                                                        ----             ------>MYB46(1)                  ----------->GT1                                    ----           <---------MYB59                   --------->DAG2                                    ------      --------->YAB1         <---------AHL20(2)                               <----------DOF2  ------     <------ZmHOX2a(2)  <---------TOE2(3)   ---------->DOF2       --------->HSFB2a(2)     <---------YAB1 -------->YAB1  <---------AHL20(1)  <---------ARR14(2)            <---------HSFB2a(2)   <---------ICU4 --------->HVH21--------->AHL20(2)  --------->ARR14(2)          <-----------GT1        --------->ICU4   tatgacgatcataccaaatttaatttgatgtttaatcgtatatgagaaaagtgaaaacagaacattttacagaacaacgtcttttgttcattatgacaag  11653400                       --------->ANAC46                                                          <---                     <---------ALFIN1                                                            ----                  ----------->HVH21                                                             <----                 <-----------HVH21                                                              -----                <------MYB46(1)<-----------RAV1(1)                                             <-----                <------MYB83 <----------DOF2     ----------->GT1                      --------->HSFB2a(2) ----->TOE2(3)  <---------DEAR3(2)             <---------LBD16                        ------>ZmHOX2a(1) ----->TOE1(3) <---------DEAR3(1)         <----------DOF2    ------------>CBF         <---------HSFB2a(2) --->ANAC58    <---------MYB46(3) <---------MYB46(3)      <------MYB83         <--------P   --------- --->ANAC58   <---------ORA47(1)  <-----------RAV1(1)     <------MYB46(1) <---------AtLEC2  <--------   cttaacaagttttatggtcggtcacacgggcctttgttgttgggctttagccggtttatttggttcaattcggtttacatggttagtcctcgaataaaat  11653500                               <---------WRKY12                              <---------MYB52(1)                              ------------>CBF                             --------->LBD16                            --------------------->WRI1                         <---------ALFIN1                        --------->ATERF1(1)                       ------>NtERF2                       <---------ATERF1(1)                      <---------ARR14(2)                      --------->ARR14(2)                   <---------ANAC55(2)         <---------TOE2(3)------>ZmHOX2a(1)         <---------TOE1(3)==============================HOX2a_HOX2a ------ICU4        --------->ANAC55(2) ----->AHL20(2)    <---------RAP2.6(2)       --------->WRKY12 -----AHL20(2)    <---------At5g28300       *TSS      <<<<<<<<<CBP60g                               < ---->AHL20(2)    --------->RAP2.6(3)      <-------GAMYB    <---------At4g35610                   --- ----AHL20(1)    <-----------GT1          <---------MYB46(3)--------->At4g35610         <----------CDC5 >AHL20(2)    <---------------AtSPL3 ------->TEIL     <<<<<<<<<SARD1                   <---------At4g35610 -AHL20(2) --------->ARR11(3)<-----------HVH21   ------>ZmHOX2a(2)               --------->ARR14(2)--   aatttcggtttaagatttgttacggctcctccgtcaatgtatcgtcgttgatcccaaatttcttctgaacaatttcgattttgaattcgcgctgagtgat  11653600                                                                          <---------MYB52(1)                                                                         --------->At4g35610                                                                         <---------At4g35610                                                                         ------>NtERF2                                                                        --------->DEAR3(1)                                                                       --------->ATERF1(1)                                                                       <------NtERF2                                                                       --------->DEAR4(2)                                                                       --------->RAP2.3(1)                                                                      <---------ATERF1(1)                                                                      <---------RAP2.3(1)                                                                      ------>NtERF2                                                                     <---------DEAR3(1)                                                                     --------->DEAR3(1)                                                                     <---------ATERF1(2)                                                                     --------->RRTF1(3)                                                                     --------->RAP2.3(3)                                                                     --------->RAP2.3(2)                                                                     --------->ATERF1(2)                                                                     --------->RRTF1(2)                                                                     <---------ALFIN1                                                                    --------->RAP2.3(1)                                                                    --------->DEAR4(2)                                                                    --------->ERF1                                                                    --------->RRTF1(1)                                                                    --------->ATERF1(1)                                                                    <---------ABI4(2)                                                                    <------NtERF2                                                                    --------->RAP2.6(1)                                                                    --------->ORA47(2)                                                                   <---------RRTF1(1)                                                                   <---------RAP2.3(1)                                                                   <---------ORA47(2)                                                                   <---------ATERF1(1)                                                                   <---------DEAR4(2)                                                                   ------>NtERF2                                                                   <---------RAP2.6(1)                                             <---------MYB46(3)    <---------ERF1                                            <---------ANAC58      <---------DEAR3(1)                                            <---------ANAC58      --------->TCP16(1)                                            <---------ANAC46      <---------RAP2.3(3)                                           <---------ZAT2         <---------RAP2.3(2)                                           <---------At4g35610    <---------PCF2<---------HSFB2a(2)            --------->LBD16            --------->DEAR3(1)         --------->DEAR3(1)          <---------LBD16           --------->DEAR3(1)            <---------RRTF1(2)      <----------DOF2              --------->DEAR3(2)             <---------RRTF1(3)    --------->ABI4(2)              --------->MYB46(3)            --------->ATERF1(1)    ------>NtERF2                ------>NtERF2  --------->ALFIN1 --------->RAP2.3(1)   <---------DEAR3(1)           --------->DEAR3(1)              <---------ATERF1(1) ---------DEAR3(1)      <---------MYB46(3) --------->ZAT2      --------->ALFIN1 --------->HSFB2a(2) ------>MYB52(1)    --------->ATHB12------->GAMYB     --------->ALFIN1--------->ABI4(1)             < ----->TEIL ------>NtERF2       --------->MYB46(3) <---------AtMYB61--------->DEAR3(2) --------->GLK1(1)   gaacggcgcttctccggctcattcattggtttcgacgaccgccgtagctggtggaggtggaagcagtggcgccgccgctggtctagacgatttccatttt  11653700      --------->KAN4(2)     <---------GLK1(1)     <---------KAN4(1)                                                                 ------->TEIL     <---------HSFB2a(1)                                                               <---------ARR14(2)     --------->KAN4(1)                                                                 --------->GLK1(2)     --------->GLK1(1)                                                         <---------ICU4     <----------TaMYB80                                                        --------->ATHB12     --------->HSFB2a(1)                                                      --------->ICU4    --------->ARR14(2)                                                 <---------ANAC58<-----------ARR10    <---------ARR11(3)                        <-----------HVH21    <----------DOF2     <---------ARR11(1)    <-----------ARR10                     <---------ANAC58         <---------DAG2     <---------ARR14(1)    <---------ARR14(2)                    <---------ANAC58        <---------DAG2      <---------CCA1(2)    ---------->TaMYB80     ---------->DOF2<---------ANAC46     ---------->ID1 <---------YAB1  --------->LBD16       <----------ID1--------->CCA1(2)     <----------DOF2 --------->YAB1 ---------LBD16 --------->AtLEC2   ------->TEIL        <-----------GT1 <---------ANAC58--------->ARR14(2)   ccaccggatattccctcaatgcaagagcgaaaagacgaagctatgcgtggtcagttcttactcttttcccttttcgtttcatgatttcgaatcttagggt  11653800                               --------->YAB1                       <-------TEIL                      --------->GLK1(2)                      --------->CCA1(2)                      --------->ARR14(1)                     --------->ARR14(2)                     --------->ARR11(1)                     <---------GLK1(2)                     <---------ARR14(2)                  --------->YAB1                                                        <-----------GT1               --------->HSFB2a(2)                                            <---------TOE1(3)               <---------HSFB2a(2)                                   ----------------->AGL3       <---------TOE2(3)--------->MYB59              --------->CCA1(2)        <---------TOE2(3)    <-   ttcaaattagaggttttctataagattcggtaatcaaatttctcagtgatcagagatttgagtatcacatctccaaatttagggtttttgatactatctg  11653900                                          --------->ATHB12                                        <---------WOX13(1)                                      --------->ATHB12                                    <---------WOX13(1)                                    <--------P                                            --------->AHL20(2)                                   <-------GAMYB                                          <---------AHL20(1)                             <---------AHL20(2)            --------->At5g28300 <---------YAB1       -                            <---------AHL20(2)           --------->ZAT6      <---------ICU4       ---                  --------->LBD16 <------MYB83<---------MYB46(3)   <----------DOF2        <---------AHL20(2) --------GLK1(1)<---------LBD16   <------MYB46(1)      <-----------GT1      --------->ICU4--------->AHL20(1)   aaaatcccaattttgtttccctgagttttttttatttggttgattgatttgttgatttaacagtaacttctttagataattagtattgctaattaattac  11654000  Previous    Next  AGI:  At1g32300.1    Description:  FAD-binding domain-containing protein. similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G46750.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G46760.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G56490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24313.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030) Range:  from: 11651322    to: 11653345    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g32310.1    Description:  similar to unknown protein [Oryza sativa] (GB:AAL67597.1) Range:  from: 11653544    to: 11654774    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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