Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->AHL20(1)                                <---------AHL20(1)                                <---------AHL20(2)                                --------->AHL20(2)                               --------->AHL20(2)                               <---------AHL20(2)                            -------->HAHB4                            <--------ATHB1                            <--------HAHB4                            --------->YAB1                            <---------ICU4                           <---------YAB1                           --------->ICU4                           <---------ATHB51                           --------->AHL20(2)                         --------->YAB1                     <---------TOE2(3)   <---------AHL20(2)               --------->AHL20(1)        --------->AHL20(2)               --------->AHL20(2)    <---------AHL20(2)               <---------AHL20(2)    --------->AHL20(2)               <---------AHL20(1)   --------->AHL20(2)                                            <--         --------->ANAC55(2)--------->ATHB51                      ---------->DOF2            <-------       <-----------GT1--------->YAB1<---------AHL20(1)         --------->YAB1         --------->AHL20(2) --------->AHL20(2)  <---------YAB1 <---------AHL20(2)      --------->YAB1  ---------->DOF2  -------- <---------AHL20(2) <-----------GT1 --------->AHL20(1)     <---------YAB1 <---------YAB1 ---------->DOF2   aatttaaatttacataataaattaacataataattaaatttatttaaatgtttctaatattctaataacaaagcttatgaaagtctcattaaaaagatag  11642200                                                                                =====================                                                                                <------ZmHOX2a(2)                                                                               --------->ARR11(3)                                               <---------ANAC55(2)         ---------->DOF2  <---------ZAT6                               --------->ANAC58     <---------MYB59  ----------->GT1                              --------->ANAC58     --------->TOE1(3)         ------- -------ZAT14                                  --------->ANAC46     --------->TOE2(3)   --------->YAB1 --ARR11(3)          <---------MYB46(3)       <---------LBD16 --------->YAB1   <---------ARR11(3) <-- ->ARR11(3)   <---------AtLEC2       <------ZmHOX2a(1)  <---------TOE2(3) --------->AHL20(2)  -------   tccagagttaaaatttacatggattgttggaactaataaggagataactacggaaactaatgaaacataacctaaataaaagatcaacacttataatcta  11642300                                                                                                    <                             <-----------GT1                                                       <-                            --------->AHL20(2)                                                 <-----         <-----------GT1    <---------AHL20(2)                                      --------->MYB52(1) ====HOX2a_HOX2a        --------->AHL20(2)             <---------AHL20(2)          <---------WRKY12-- -->TOE2(2)             <---------AHL20(2)    <---------MYB46(3)              --------->At4g35610  <- ----ZmHOX2a(1)  --------->TOE2(2)            --------->MYB52(2)         --------->DAG2   ----------- -->TOE1(2)      --------->TOE1(2)          <---------MYB52(1)          ---------->DOF2   <---------ZAT6   ggagaataatttttcaaaacataagattaattaactaaatcaaaccgttcgtttgattttttttttcacttgaaaaaagcagaggccaacgagtgttata  11642400                         <-----------GT1        --------->AHL20(2)   <-----------TBP    <---------MYB46(3) ---------AHL20(2)   <---------WOX13(1) --------AHL20(2)   <------------CBF ----YAB1     <---------YAB1 ------->AHL20(2)  --------->ATHB12        <---------ICU4         <-----------ARR10 --------AHL20(1) <---------YAB1          <---------ATHB12        --------->GLK1(2)     <-----------RAV1(1) >GT1   <---------AHL20(2)          <-----------GT1     ----------->HVH21              <---------TOE2(3)   attttttttataaattactagtgattgttacttcgttttcacaaatcattctcttaacatgacagacaaatctagccttggatactatttatgttggcct  11642500                                                             <---------ANAC46                                                             <---------AtLEC2                                                         <------------CBF                                                        --------->ATHB12                                                        <---------ICU4                                                  <-----------HVH21        ----------->ARR10                                                  <-----------TGA1         --------->MYB59                                                 <---------ANAC58     <---------YAB1           <---------AHL20(2)                <----------DOF2 <---------ANAC58   --------->TOE1(2)           --------->AHL20(2)           --------->At4g35610  <---------ANAC58 <------ZmHOX2a(2) <---------ANAC58             <---------MYB52(1) <---------ANAC58  <------ZmHOX2a(2)  ----------->GT1 <---------ANAC58 <---------ANAC46      <---------At4g35610 --------->ATHB12 --------->AGP1   tgtacttgtctgataaatttctgtgtatcactgttatttctcatctgctttgcgtcattcattgcttggatcatggttagatccaacgatgtgaaattcc  11642600               ----------->HVH21             <---------ZAT2             --------->At4g35610         --------->YAB1             <---------At4g35610      ----------->RAV1(1)             --------->ZAT2        --------->ANAC58         <----------CDC5           --------->ANAC58        --------->At4g35610      ---------->DOF2                <----------DOF2        <---------At4g35610   --------->HSFB2a(2)     <---------ZAT14    ----------->HVH21         <---------HSFB2a(2)     --------->ZAT14           --------->ANAC46    --------->ANAC46         ------>ZmHOX2a(2)        <---------ZAT18------->TEIL--------->LBD16   aagtctacgacgctgagctgacacatttcgatctcgaaagcaacaataacctccagtacagtctctctttgaatctctccatccgaaactcgaagagtag  11642700                                                          <---------At4g35610                            -------->P                    --------->At4g35610                        --------->ANAC58        --------->At4g35610                        --------->ANAC58        <---------At4g35610                        --------->ANAC46    ------->TEIL<------ZmHOX2a(1)         --------->TOE2(3)                 <------MYB83   --------->DOF5.7(2) <---------MYB52(1)   <---------MYB52(1)       ---                 <------MYB46(1)<---------MYB52(1)<---------MYB46(3)    <-------GAMYB   --------->ANAC58            <---------YAB1 --------->MYB52(1)  ------------>AtMYB77    <---------ANAC46 --------->ANAC58   tatcggaatccattacgataggtttgaagcaaccgtttactacatgaatcagcggttaggagctgttcccatgccgttgttctaccttggaagcaagaac  11642800   <---------ANAC58                                      --------->ANAC58   <---------ANAC58                                      --------->ANAC46  --------->HSFC1(2)                                     --------->ANAC58  --------->HSFB2a(1)                           ----------->GT1--------->DAG2  <---------HSFC1(2)                        ---------->DOF2   ---------->DOF2            <---------ANAC46 ------>ANAC46          <----------ID1  <-----------GT1 ------->TEIL            --------->At4g35610   acgatgcttctcagagcattgtttgaaggccaaactctagttttactaaagggtaatgaacgcaaaaagtttgaagatgatcagaagactggtgtttata  11642900                                                          --------->At4g35610                                                          <---------At4g35610                                                        <---------ANAC46                                                     ----------->HVH21                                                     --------->ALFIN1                                                    ------->MYC3                                                    ------->MYC2                                                    <-------PIF5                                                    ------->PIF5                                                    <-------MYC2          --------->At4g35610                       <-------MYC3          <---------ZAT2                           --------->ANAC55(2)          <---------At4g35610                      --------->O2          --------->ZAT2                           <---------O2      --------->ALFIN1                             --------->TGA1a      ----------->HVH21                            <---------ANAC58    <---------ANAC58             <---------TOE2(3) <---------TGA1a                --------->At4g35610    <---------O2                 <---------TOE1(3) ================================MYC_MYB    <---------TGA1a              <---------YAB1    <---------bZIP60(2)            <---------At4g35610    <---------ANAC46       <---------TOE2(3)       <---------ANAC58        <-------GAMYB    --------->TGA1a        <---------TOE1(3)       <---------ANAC46       --------->MYB52(2)    <---------ANAC58<---------AHL20(2)             <---------ANAC55(2)<---------MYB46(3)    --------->O2   <---------AHL20(2)             <-----------------------TaNAC69(2) ----------->HVH21 --------->AHL20(2)             ------------>OsbHLH66   <---------MYB46(3)      <--   gaattgacgtgaagctgagtattaattttagggttatggttttgcatttagtcacgtggccgatgaaaccagttgttcgttgtcatcttaagataccatt  11643000                                                        <---------MYB52(1)                                                       ------->MYC3                                                       <-------MYC3                                                      <---------TGA1a                                               --------->At4g35610                                               <---------At4g35610                                           -------->P --------->O2                                           =====================MYC_MYB      <---------AHL20(1)          ------>ZmHOX2a(1)               --------->WOX13(1)  --------->At4g35610      --------->ARR14(2)         <---------GLK1(1)    --------->TGA1a        --------->ARR11(3)      <---------ARR14(2)         --------->GLK1(1)    <---------O2           --------->AHL20(1)    <------MYB83      --------->LBD16    <---------WRKY38(1)  <---------At4g35610   --------->ANAC55(2)    <------MYB46(1)  ===========================================MYC_MYB --------->AHL20(2)<---------AHL20(2)   --------->MYB59   ------->GAMYB       <---------WRKY12   <---------ANAC58 <---------ARR11(3) -------YAB1        <---------LBD16     --------->WRKY18(1) <---------ANAC58<---------AHL20(2)    <--   agcattaggttcctctaactcaaccggagggtttgatttccagtcaaccagatgccacgttggcttctgaagttttaaatatttttaagtatttaatcta  11643100  Previous    Next  AGI:  At1g32270.1    Description:  ATSYP24 (syntaxin 24); protein binding. Identical to Putative syntaxin-24 (SYP24) [Arabidopsis Thaliana] (GB:Q9C615;GB:Q9LQN2); similar to SYP23 (syntaxin 23), SNAP receptor [Arabidopsis thaliana] (TAIR:AT4G17730.1); similar to SYP23 (syntaxin 23) [Arabidopsis thaliana] (TAIR:AT4G17730.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN75135.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847); contains InterPro domain t-SNARE; (InterPro:IPR010989) Range:  from: 11642573    to: 11644942    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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