Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------YAB1                                                              --------->ARR11(3)      --------->AHL20(2)                                                            <---------ICU4      <---------AHL20(2)                                                            <---------ARR11(3)     <---------AHL20(2)                                                             --------->AHL20(1) -------->YAB1                                                                   --------->YAB1 --------->GT1                                                         <----------DOF2 --------YAB1                   --------->LBD16                 <---------YAB1   --------->AHL20(2) ------ICU4                    --------->HSFB2a(2)      <---------AHL20(2)     --------->AHL20(2) ----->YAB1                    <---------HSFB2a(2)     --------->AHL20(2)     --------->YAB1 ---->ICU4                    <---------LBD16          <---------AHL20(2)----------->GT1 -----ATHB51       --------->MYB46(3)               --------->ATHB12<-----------GT1 <---------AHL20(1)   aatgaaaattattttttgttaacaaacatttttctggagaaagtttttaaaaattgattaaatattcttataactttgtaaaataatattttcaaaaact  11611700                                                                                    <---------ARR11(3)                                                                                    --------->AHL20(1)                                                                                    <---------AHL20(1)                                                                                    --------->ARR11(3)                                                                                  --------->AHL20(1)                        --------->AHL20(2)                                        --------->ARR11(3)                        <---------AHL20(1)                                        <---------AHL20(1)                        --------->AHL20(1)                                   ----------->GT1                   <---------AHL20(2)                                      ---------->DOF2                  --------->AHL20(2)                                      <---------ATHB12                  <---------AHL20(1)                                      --------->ICU4                  <---------AHL20(2)                                 --------->ANAC55(2)        <<<<<         ------>ZmHOX2a(1)                                           --------->ANAC58           <----        --------->TOE2(3)                                            --------->ANAC58           -----        --------->ANAC46<---------AHL20(2)                           --------->ANAC46   <-----------GT1        --------->TOE1(3)    <-----------GT1                     --------->TOE2(1)<---------ARR11(3)     --------->ARR14(2)--------->AHL20(2)                    --------->ARR11(3)--------->AHL20(2)   tctaaactatcctcaactaataaaattttatttgccacttgcaatacaactaaaactttgttagaccttgtacgcaataaagaaaatatttttcaatgtc  11611800                                                          --------->YAB1                                                         <---------ATHB12                                                       --------->WOX13(1)                                                     <---------YAB1                                                 --------->YAB1               <---------DAG2                                                 --------->TOE2(3)--------->LBD16                   < <<<<<AtTINY2         <------NtERF2             <<<<<<<<<ARR1    <---------ANAC46                   < -----ETT(2)        --------->PCF2              <<<<<<<<<ARR2    <---------ANAC55(2)             <--- ---->ETT(2)        --------->PCF5         <-----------GT1<---------ICU4      <----------DOF2   -----   gatagctatctccattccaatggcccccctagtctattcatcgattcacaatcttatcaatcatgttccgtcaatacacacttttctaatttcaacaatt  11611900                                 <---------YAB1                                --------->AHL20(1)                                <---------AHL20(1)               <---------ICU4                   <--                               --------->ICU4           <---------YAB1                    <---------ANAC58                          --------->YAB1                <---------AHL20(2)                <---------ANAC58    <---------ICU4    --------->AHL20(2)               <---------AHL20(1)                 <---------ANAC46    <-----------RAV1(1)   ----------->GT1           --------->YAB1               <---------ARR11(3) ---------YAB1        <---------AHL20(2)           <---------YAB1--------->ATHB51--------->ARR14(2) - ---------AHL20(2)   --------->AHL20(2)          --------->YAB1  -------->ATHB1  <---------ARR11(1)<- ------AHL20(2)    <---------------AGL15        <---------YAB1  <---------YAB1   <-----------ARR10<-- ---->AHL20(2)     --------------->AGL15     ------>ZmHOX2a(1)  --------->ICU4  <---------CCA1(2)----   ttataattgttgccctcgttacatttaattgtaatatttttgttctcctcatgataatattattccattattgtattcgaccatatctatctgcgtgtat  11612000                                --------->ARR11(3)                                <---------ARR11(3)                              <---------TOE2(3)          ---------->ID1                        --------->MYB46(3)               <---------CCA1(2)                        ------------>CBF               <---------REM1(1)                       --------->ANAC58              <---------ANAC46                       --------->ANAC46             ------>MYB46(1)                               *TSS                       ------>MYB46(1)              ------>MYB83                               ------                       --------->ANAC58          --------->DEAR3(2)                            ------                       ------>MYB83            --------->MYB52(1)                              ------          --------->WOX13(1) --------->YAB1   ----------->HVH21                          <---------ANAC58        ------------>CBF<---------MYB55(2)   <---------WOX13(1)                      <----------DOF2 ---------GT1        --------->DEAR3(1)    <---------WRKY18(1)                       <---------DAG2 ------->ZAP1        --------->AtMYB61    --------->WRKY12               <---------ALFIN1<---------ANAC58 --------At5g28300   <---------ALFIN1     --------->WRKY38(1)      ---------->DOF2  <---------ANAC58 -------WRKY18(1)   --------->MYB46(3)    --------->WRKY45      --------->YAB1      <---------ANAC58 ----->WRKY38(1)  <-----------GT1        --------->DOF5.7(2) <----------DOF2  --------->ATHB12 ------   tgaccgcctcttcaattaagtcaccacccaataagatttcgacgttgactgaccgacttgtagctttaataaagcccacatgatttgcttttcgtccaag  11612100                                                 <---------GLK1(2)                                         ------>NtERF2                                        --------->DEAR3(1)                                        --------->DREB2C(2)                                        --------->RAP2.3(3)                                       --------->ORA47(2)                                       --------->RAP2.3(1)                                     --------->DEAR3(1)                                    <---------ABI4(2)                                    --------->MYB46(3)                                    --------->DEAR3(2)                                    <------------AtMYB77                                    --------->ATERF1(1)                    <------ZmHOX2a(1)------->GAMYB      <---------MYB46(3)           <---------ATERF1(1) --->ANAC58        ----------->GT1<---------ARR14(2) --->AtLEC2        <----------ID1 --------->ARR14(2)             --------->At4g35610      <---------AHL20(2) --->ANAC46       ----------->GT1<------ZmHOX2a(1)      <<<<<<<<<TBF1                     --------->AHL20(2) --->ANAC58   ---------->DOF2 <---------LBD16    <---------ICU4<---------ICU4       --------->AHL20(2)   caaatttttggttagagaaagaggaaaaaaactcaggaaccgccgacttaagaatttcttcttcatcatctctccaatatcgccgattatatataaatga  11612200                                 <------NtERF2                                --------->LBD16                                ------>NtERF2                               <---------ATERF1(2)           <---------CCA1(2)                               <---------DEAR3(1)        --------->ARR14(2)                               --------->DEAR3(1)        --------->GLK1(2)                               --------->ATERF1(2)       <---------ARR14(2)                              --------->ATERF1(1)        <-----------ARR10                              <---------LBD16            <---------ARR11(3)                              --------->DEAR4(2)         --------->ARR11(3)                     <----                       <-----------HVH21                <---------ARR14(1)                    <------                 --------------------->WRI1             <---------CCA1(2)        <---------MYB52(1)               <<<<<<<<<TBF1--------->DEAR3(1)      --------->ANAC58         ------>ZmHOX2a(1)-------     --------->GLK1(2) <-----------TGA1             --------->ANAC46   <---------DAG2<-----------GT1    <---------GLK1(2)---------->ID1                 --------->ANAC58   <----------DOF2    <----------   ctcttcgattctgtttcttcttcgtcgtcatcgccggcttagggttttctctataagcaaatcttatcttctccttttcctccgttttttctggtcagct  11612300                                  ----------->GT1      <---------TOE2(3)          ------>ZmHOX2a(2)  <----------DOF2              <---------AGP1 <---------ANAC58           <---------------------WRI1 <---------ANAC58    <---------ANAC46                --------->ICU4 ------DOF2          <---------ANAC58             <---------MYB52(1)                    <-----------GT1 ---At4g35610        <---------ANAC58            <-----------HVH21                <---------MYB52(1) -->At4g35610   <-----------RAV1(1)    ---------->DOF2  <-------TEIL           ---------->ID1 -HVH21     <---------YAB1  <------ZmHOX2a(2)  <-------TEIL   <-------TEIL  <----------DOF2   tttgcttttagattacccttgttgcctgcgatcgatctgaaaaaagaggtccgtcatgttcatgttcatgttcagtttcttttcgttttgtttcaattct  11612400                 <---------AHL20(2)               <---------RVE1(1)              <---------ARR14(2)                                              <-------TEIL              --------->ARR11(3)                                             --------->ARR14(1)              --------->ARR14(2)                                    ------>ZmHOX2a(2)              <-              <---------ARR11(3)                                  <---------ARR14(2)       <---------ANAC58             <------ZmHOX2a(1)                                    --------->ARR14(2)     <---------YAB1           <---------TOE2(3)                              --------->ATHB12  <---------GLK1(2) <------       <----------DOF2                                   <---------YAB1   ----------->ARR10<---------ANAC58   tctcatgcgatttgaggatttttttttttatcttgaattgtttttttttgttgaagtcgatgattgtagatcggcttagattcgtttgattttgagtggt  11612500                                                  ------>ZmHOX2a(2)                                          <---------ANAC58                                        <---------YAB1       <---------ANAC58                                     --------->ICU4          <---------ANAC58                              <---------ANAC58   <------ZmHOX2a(2)          --------->ATHB12    <---------ANAC46  --------->ARR11(3)         <---------YAB1   <---------HSFC1(2)    --------->ARR14(2) <-----------RAV1(1)      --------->ATHB12<---------ANAC58 <-----------GT1                 ---------- --------ANAC46           <---------HSFB2a(1)   <---------ARR14(2)                      --------->GLK1(2) ---MYB46(3)<---------WOX13(1)<---------ANAC58  <---------ARR11(3)           <---------AHL20(2)   ---   tttgtgttgttttgattgagtttttggatgattcgtgtgattatgcttacgatctgtgttttttcgtctctgattttagtttattttgaaaatcagtgaa  11612600  Previous    Next  AGI:  At1g32230.1    Description:  RCD1 (RADICAL-INDUCED CELL DEATH1). similar to SRO1 (SIMILAR TO RCD ONE 1), NAD+ ADP-ribosyltransferase [Arabidopsis thaliana] (TAIR:AT2G35510.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81025.1); contains InterPro domain Poly(ADP-ribose) polymerase, catalytic region; (InterPro:IPR012317); contains InterPro domain WWE (InterPro:IPR004170) Range:  from: 11612098    to: 11616198    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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