Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                 <---                                                       <----------ID1                         <------                                                   --------->YAB1                          <------ZmHOX2a(2)                                         --------->ARR14(2)                               --------->ARR11(3)                                         --------->GLK1(2)                                <---------ARR11(3)                         <---------HSFB2a(2) ------>ZmHOX2a(1)                     ------>ZmHOX2a(1) ----->LBD16      --------->ARR11(3)     <---------ARR14(2)     --------->TOE2(3)  ===============HOX2a_HOX2a ---->HSFB2a(2)   <---------ARR11(3) --------->YAB1--------->AHL20(2) --------->YAB1  ---------->DOF2 -----HSFB2a(2) <---------ZAT6--------->MYB46(3)--------->YAB1  <---------MYB59   --------->TOE2(3) ----LBD16--------->AGP1 --------->HSFB2a(2) ----------->GT1    --------->TOE1(3) --------->TOE1(3)   agaagagaaacagagctagagatactactcgaacaactattagaatcctgtaataaaaaaacaaaacctaaatcagaaaaacatccttaaaagatcatgc  11589200                                                            <-----------GT1                                                           <---------YAB1                                                     --------->AHL20(2)                                                     <---------AHL20(2)                                                     <---------YAB1                                                  --------->AHL20(1)                             ----                                                  <---------AHL20(1)                             <---                                                <---------AHL20(1)                        --------->ARR11(3)                                           <---------AHL20(2)                             <---------GLK1(2)                                      <---------CCA1(1)  <---------ICU4                  <---------RVE1(1)                                      <---------RVE1(1)  --------->YAB1                 ----------->ARR10          ---------->DOF2            <---------ARR11(3) <---------YAB1          --------->ATHB12 ---- <---------YAB1              --------->ANAC58   --------->AHL20(1)             <---------YAB1  <----- ------DAG2                  --------->ANAC58  --------->AHL20(2)            --------->YAB1--------->GLK1(2) -------DOF2           --------->MYB46(3)  --------->AHL20(2)      ---------->DOF2 ------>ZmHOX2a(2) ---YAB1<---------ATHB12------->GAMYB--------->ARR11(3) --------->ICU4      --------->ICU4<---------ARR11(3)   tttatgacaaatcaaagtgtttgtaacagacacgactgagattttttaaatatatattattattaccgataaagagcgatgatgatcggagagattttga  11589300                                                                                            <--------                                                                                           <-------GAMYB                                                                                          <---------MYB46(3)                                                                                          --------->MYB52(2)                                                                                         <-------TEIL                                                                                        <---------MYB52(1)                                                                                    ------>ZmHOX2a(2)                                                                                    <---------LBD16                                                                                   <------ZmHOX2a(2)                                 --------->ANAC58                                  --------->ARR14(1)                                 --------->ANAC58                                  --------->CCA1(2)                             --------->ANAC58                                     --------->ARR11(1)                             --------->ANAC58                                     --------->AGP1                           ---------->DOF2                                        <---------ARR14(2)                    <---------ARR11(3)                                            --------->ARR11(3)                    --------->ARR11(3)                                          --------->MYB59                   --------->RVE1(1)                                            ----------->ARR10                   <---------GLK1(1)                                    =============================                   --------->CCA1(1)                       <---------TOE2(2)  <---------MYB52(1)                   <---------CCA1(1)                       ------>MYB83 ===========================MYC_MYB ----->bZIP60(1)   <---------RVE1(1)                       ------>MYB46(1)   <-----------HVH21     <- ------bZIP60(1)   --------->GLK1(1)                     --------->TOE2(2)  <---------MYB46(3)   <--- ----->ANAC46     --------->ARR11(3)              <<<<<<<<<TBF1         <---------TGA1a<---------MYB52(1) ------GT1        <---------ARR11(3)           <<<<<<<<<TBF1     <---------GLK1(2)--------->ARR14(2)   cgacacgagtaagagaataagatatcttggaaagcaaggtatcgtcttcttcttcttcacctacgttgattctcacatcggttagatccggttcgttgtc  11589400                                            ------>MYB46(1)                                     -----                                         --------->DEAR3(2)                                  --------                                       <---------ARR14(2)                                    <-------                                       --------->ARR14(2)                                    --------                                    --------->ANAC46                                       --------->LBD16                                    --------->ANAC58                                       <---------SPL7                                    --------->ANAC58                                      --------->DEAR3(1)                                   --------->SPL7                                        <------NtERF2                               <---------------AtSPL3                                    --------->ATERF1(1)                             --------->ARR14(2)                      <------ZmHOX2a(1)   <---------LBD16                             <---------ARR14(2)                     --------->LBD16     ------>NtERF2              --------->ARR14(2)  --------->MYB52(1)<---------WOX13(1)     --------->ATHB12----------             <------NtERF2<---------HSFB2a(2)     --------->ATHB12 --------->LBD16     --------->DEAR3(1)           --------->RAP2.6(2)--------->MYB52(1) <---------YAB1   <---------HSFB2a(2)  <---------O2    --------->At4g35610   --------->HSFB2a(2)    ------>ZmHOX2a(1)--------->HSFB2a(2)  --------->O2 -MYB52(1)<---------LBD16 --------->ANAC46  ------>MYB83          <---------LBD16      <---------DEAR3(1) =======bZIP_DOF         <---------LBD16 --------->MYB46(3)   --------->GLK1(1)       --------->ATERF1(1) ----------GT1<---------ARR14(2) <---------SPL7----------->RAV1(2)<-----------RAV1(2)<---------ATERF1(1) -------DOF2--------->LBD16--------->LBD16--------->DEAR3(1)  <---------GLK1(1) ---------->DOF2<-----   tttaccagatgagccggaaacgatgtctccggaaacggacggaaccgactcctgattggaatcgatttccaggagaacgattgaaagcgacgccggaccg  11589500                                                                                  <---------ANAC55(1)                                                                                  <---------O2                        --------->HSFB2a(2)                                       --------->TGA1a                       ------>ZmHOX2a(2)                                          <---------ANAC58                <------NtERF2                                                     <---------TGA1a               <---------SPL7                                                     --------->O2              <---------DEAR3(1)                                                  <---------ANAC55(2)             --------->ATERF1(1)                                                  --------->ANAC55(2)             <------NtERF2                                               <---------GLK1(2)            <-----------HVH21                                          <---------RAP2.6(3)         --------->LBD16<---------HSFB2a(2)                            --------->LBD16         <---------ATERF1(1)                                          --------->HSFB2a(2)       <---------LBD16<------ZmHOX2a(2)                               --------->LBD16     <---------SPL7  <---------ARR14(2)           <---------ZAT2    ------>NtERF2 <---------ANAC46 <---------MYB46(3)  --------->ARR14(2)           <---------At4g35610 --------->RAP2.6(2)     <------ ---->LBD16 ------>NtERF2          <---------ANAC58                --------->DEAR3(1)         ------- ->ARR14(2)--------->DEAR3(1)      <---------ANAC58        --------->LBD16        <---------ANAC58 --ARR14(2)<---------ANAC46 <---------TOE2(1)     --------->ZAT2 --------->At4g35610      <---------GLK1(2) ->SPL7--------->SPL7--------->ARR11(3)---------->ID1--------->At4g35610<------NtERF2  <---------ANAC46 ->HVH21<---------DEAR3(1)  <---------TOE1(1)     --------->At4g35610<---------LBD16   <------------- ----LBD16 <---------DEAR3(1)     <-------TEIL--------->YAB1 --------->ARR14(2)  <-------TEIL<-------   ggattgttgtccggcgtcggagggatctggacgaggtacttgttgtaatcagagctgcttccgaaatcgctgccggaatttgatacgtggctgattctgg  11589600                                                                ----------->GT1                                                            --------->ARR14(2)                                                            --------->GLK1(2)                                                            <---------ARR14(2)                                                           --------->ARR14(2)                                                           <---------ARR14(2)                                                           <---------GLK1(2)                                                          <------NtERF2                                                         --------->LBD16                                                        --------->LBD16                         <---------ICU4                <------NtERF2                         <--------HAHB4                <---------LBD16                        <---------ATHB12              ------>NtERF2                      --------->WOX13(1)              <---------ATERF1(1)            --------->ARR14(2)                       <---------DEAR3(1)                        ------            <---------ARR14(2)                       --------->DEAR3(1)                  --------->ZAT18            <---------GLK1(2)                       --------->ATERF1(1)                --------->ANAC58 ---HSFB2a(2)  <-----------GT1                     <-----------HVH21                   --------->ANAC46 -->HSFB2a(2)--------->GLK1(2)                    <---------ANAC58                     --------->ANAC58 ----AGL2 ----------->ARR10                       --------->ANAC46                   --------->MYB52(1) --LBD16 <------ZmHOX2a(1)        <---------ATHB12<---------ANAC58     ----------->GT1--------->RAP2.6(3)   gatgtcttagaggagattctccgtccatcattttcaataaatctcttgttttccgtcgccggaatctggagaaatgaaaaaaaaaaaaaacggcactgag  11589700                                                              <------------CBF                                                             --------->ATHB12                                                            <---------AHL20(2)                    ---------->DOF2   --------->AHL20(2)    --------->AHL20(2)     <---------GLK1(2)              <---------TOE2(3)       --------->AHL20(1)                 <----- ---------->DOF2   --------->YAB1<---------YAB1            --------->AHL20(2)      <---------GLK1(2) ----->GT1       --------->GLK1(2)<---------AHL20(2) ----------->GT1           ---------->DOF2 <-----   taaaaaagattatttggagaatcaaagtttcgatttttaatgaaatatgtgtgtgaagaaaattaattgggaatcaaatccaaaagaaactcttaccctt  11589800                                                                                   --------->GLK1(2)                                                                                 <---------HSFC1(2)                                                                                 --------->HSFC1(2)                                                                                 <---------HSFB2a(1)                                                                                 --------->HSFB2a(1)                                                                             ----------->GT1                                                                            --------->ANAC46                                                                          --------->MYB52(1)                                                                      --------->TOE2(3)                                                                      --------->TOE1(3)                                                                      <---------------AGL15                                                                      --------------->AGL15                                                                     ----------------->AG                                                                     <-----------------AG                                                                     <-----------------AGL3                                                                     <-----------------AGL2                                      <-----------GT1                ----------------->AGL2                         <---------GLK1(2)                           ----------------->AGL1      --------->WOX13(1) <---------ARR11(3)                          <-----------------AGL1    <---------AHL20(2)   --------->ARR11(3)                          ----------------->AGL3 ----DAG2--------->YAB1----------->ARR10 <----------DOF2            <---------At5g28300 -----DOF2   --------->GLK1(2)     ----------->GT1  <---------MYB52(1)--------->YAB1   tttgatataaatcagaatcagtgatgagattttcaaaatgttactttcttctctgttttgttttttcatttaccataaacggaaaattctgaagaattca  11589900                                      --------->CCA1(2)                                     <---------ARR14(2)                                     --------->ARR11(1)                                     --------->ARR14(2)                                     --------->ARR11(3)                                     <---------ARR11(3)                                   ----------->ARR10                              <---------ANAC46                                        <---------WRKY45                              <---------ANAC58                                        <---------WRKY38(1)                          --------->ZAT14                                             <---------WRKY12                       <---------ANAC58                                              <<<<<<<<<<WRKY11                       <---------ANAC46                                --------->GLK1(2)                       <---------ANAC58                                <---------ARR11(3)        <---                 ------->TEIL <---------ANAC58                   --------->HSFB2a(2) --------->WRKY18(1)              <---------YAB1<---------ANAC46                     <---------HSFB2a(2) <<<<<<<<<<WRKY6          <----------DOF2 <---------ZAT14                <---------TOE1(3)   <---------WOX13(1)  <---          <---------DAG2 --------->ALFIN1                <---------TOE2(3)<---------YAB1         <---   ctaagaacaaaactttatgaatttggagtgttgtgtgaagatatgggttttatgctattgaggttttctacaaaatctaattgaatggtcaacaaattgg  11590000                                                                   --------->AHL20(2)                                                                   <---------AHL20(2)         --------->GLK1(2)                                        --------->AHL20(2)        <---------ARR11(3)                                        <---------AHL20(2)        --------->ARR11(3)                                    --------->AHL20(2)                    -      ----------->ARR10      <-----------ARR10                <---------AHL20(2)              -------     <------ZmHOX2a(1)      <---------CCA1(2)                <---------YAB1                   <------ ------ANAC46      ------>ZmHOX2a(1)                      --------->ICU4                  <---------- ------ANAC58     --------->TOE1(3)             <---------LBD16   --------->YAB1      <---------YAB1- ------ANAC58     --------->TOE2(3)  <----------DOF2    ----------->GT1  --------->ALFIN1<---------TOE2(3)   tgtgagaggagattttgtttccttaatcgcatatattagctttgaaaatttgtggaaatagttattaattaaaatgtgttgaacagctattaatgctgca  11590100  Previous    Next  AGI:  At1g32180.1    Description:  ATCSLD6 (Cellulose synthase-like D6); cellulose synthase/ transferase, transferring glycosyl groups. similar to ATCSLD4 (Cellulose synthase-like D4), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G38190.1); similar to CSLD3 (CELLULOSE SYNTHASE-LIKE 3), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G03050.1); similar to ATCSLD2 (Cellulose synthase-like D2), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G16910.1); similar to cellulose synthase-like protein D4 [Populus tremuloides] (GB:AAO03579.1); simil Range:  from: 11586496    to: 11589631    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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