Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <------MYB83                                      <------MYB46(1)                                   ----------->GT1                                    <--------P                                       ------>MYB83                              -------->HAHB4                                         ------>MYB46(1)      <-------PIF5            --------->YAB1                                    ------>MYB46(1)      ------->PIF5            <---------ICU4                                    ------>MYB83   ------->GAMYB             --------->ICU4                                     --------->MYB52(1)  --------->MYB46(3)         <---------ATHB51            <----------DOF2      <---------MYB59 --->CCA1(2)               --------->YAB1               <---------ANAC58      --------->AtMYB61    -- ---ARR11(3)            --------->TOE2(3)               <---------ANAC58   <-----------GT1  --------- -->ARR11(3)            <----------DOF2            --------->ATHB12----------->GT1   --------->MYB52(1)   tacaaccacgagcccaagttagacttctttaataatgggtaggctcagaccatcgattgctttaggcctgggtaaataaacctaaccaaatggatactaa  11578100                                                                <---------ZAT2                                                        <---------AHL20(2)   --------->ANAC58                                                    --------->YAB1           --------->ANAC58                                                <---------AHL20(2)       --------->ANAC58                                                --------->AHL20(2)  ----------->ARR10   =============               ------->TEIL                 --------->AHL20(2)  --------->ZAT2          -------->P ------->GLK1(2)                       ----------->GT1 --------->AHL20(2)--------->ANAC58 -->GT1 ------->GAMYB         <---------YAB1--------->ICU4      <---------At4g35610  <---------MYB52(2)   aattctataaccgaatgaaccgaaactaaattagtattgaaccgaaatatttatttataaaattcgagctcagactcgcacttaacatctaacccgaact  11578200                               <-----------GT1                         <---------ANAC55(2)                         --------->At4g35610                         ----------->GT1                       <-----------RAV1(2)                      --------->TGA2(2)                      <---------MYB52(1)                     <-----------HVH21                     <-----------TGA1                    ====================================bZIP_DOF                    <---------ANAC58                    <---------bZIP60(2)                    --------->bZIP60(1)                    <---------bZIP60(1)                    --------->bZIP60(2)                    <---------TGA1a                    <---------ANAC58                         <---------ANAC58                    <---------ANAC55(2)         --------->At4g35610                    --------->O2                <---------At4g35610                    --------->TGA2(1)           <---------ZAT2                    <---------ANAC46            --------->ZAT2                    <---------TGA2(1)        ---------->DOF2 <---------ANAC58                    <---------O2           --------->ANAC58 <---------ZAT2  <---------YAB1                    --------->TGA1a        --------->ANAC58 --------->HSFB2a(1)                   ----------->STF1        --------->ANAC46 --------->ZAT2--------->YAB1                  <---------TGA2(2)     ------>NtERF2       --------->HSFC1(2)                 ----------->TGA1       <------NtERF2       <---------HSFC1(2)                     --                 ----------->HVH21    <---------ZAT18--------->ZAT2--------->At4g35610             --               <---------MYB46(3)   <-----------HVH21--------->At4g35610<---------ANAC46         ---- =============================MYC_MYB --------->SPL7 <---------ZAT2<---------At4g35610           <---   taaacagaacaaatcggttgtgacgtcaggtaaaaaccagtccgcccgaaagctgagctcgaagcttgcagatgacttataatttagtcgatctaaaaac  11578300                                                <---------TOE2(3)                      <-----------RAV1(2)     ---------->DOF2                     <------ZmHOX2a(2)     ----------->RAV1(1)               --------->ARR14(2)         --------->At1g77200               <---------ARR14(2)         --------->DREB2C(2)    <-----------------AGL1                ------->GAMYB    <-----------------AG----------->GT1  --------->DEAR3(2)                                       --- ---->MYB83  ===============HOX2a_HOX2a  --------->MYB46(3)                                      <--- ---->MYB46(1) --------->GLK1(2)       --------->MYB52(1)                                 <----------DOF2 ----->TOE2(3)<---------GLK1(1) <---------ANAC55(2)     --------->TOE2(3)      <----------ID1    ---- ------MYB59 <------ZmHOX2a(1)  --------->ANAC55(2)    --------->YAB1        ---------->DOF2   <-----   ctaatttcaagattaggaatccgatcaggttaatacataatcaaccgacaaaggttaacataaaacataaacttgttcttaaagacaaaaaccttttaag  11578400                                                  --------------->AGL15                                                  <---------------AGL15               *TSS                                                 <-----------------AGL2               <---------DDF1      ----------->GT1                            <-----------------AGL3              --------->ETT(2)  ---------->DOF2                                ----------------->AGL3           <---------MYB46(3) ------>CCA1(2)                            ---------->DOF2                       --------->ALFIN1 ------ARR11(3)                        --------->CCA1(2)              ---------->DOF2<---------ETT(2) ----->ARR11(3)      ---------->DOF2  --------->ARR11(3)      ---------->DOF2    <---------AtMYB61 ----TOE2(3)    ----------->GT1       <---------ARR11(3) ----------->GT1   --------->CCA1(2)   <-----   atataaaagtgtttaatatggataaaagtctgaaaaataagatataaaagtgcttaatatggataaaagtccgaaagataagagtggtcgacataagtca  11578500                         ======================HOX2a_HOX2a                         ------>ZmHOX2a(2)                        =======================HOX2a_HOX2a                  ------>MYB83                  --------->MYB52(1)                  ------>MYB46(1)                 ----------->HVH21                 --------->MYB55(1)                <---------MYB111(2)                <---------MYB46(2)<---------ZAT6                <---------MYB111(1)     ------>ZmHOX2a(1)                <---------MYB59   --------->ALFIN1              ------>MYB46(1) --------->At4g35610              -------->P<------ZmHOX2a(2)            --------->DEAR3(1)<---------ZAT14                               <---------ARR14(2)     <-            <---------MYB46(2)<---------At4g35610                   <---------STY1(2)        <-------        --------->SPL7 <---------ARR14(2)                           --------->STY1(2)       <--------      <---------SPL7   --------->ARR14(2)                           <---------ZAT2          <--------     <---------ANAC58  <---------ARR11(3) <---------ZAT2            --------->ZAT2     --------->MYB52(1)     <---------ANAC58  --------->ARR11(3) --------->ZAT2          ------>ZmHOX2a(1)    <---------DOF5.7(2) ----WRKY38(1)------>MYB83    --------->ZAT14           <---------ZAT14     --------->ARR14(2)     --   acagttgtcgttcgcctacctaacagatcgtctgcagtgttcctagctccagtttgtctgtagttttcctagctcgcagttcgtctagtaaacggcttgt  11578600              --------->ANAC58              --------->ANAC58       <-----------RAV1(1)    <----------DOF2  <---------At4g35610                                 --------->At4g35610 --------At4g35610                        <---------ZAT14 ---DOF2    <---------ANAC58            --------->ETT(2) -ANAC58    <---------ANAC46    --------->MYB46(3)    <---------ZAT2                      <----------DOF2 -ANAC58    <---------ANAC58  --------->MYB52(1)      --------->ZAT2                  --------->REM1(1) ------->At4g35610         --------->STY1(2)     <-----------GT1         --------->MYB52(1)  --------   ctgcagcttttgtggctcgcaattcgcctagctaacagctcgtctacagttttcccagctcgaagtttgtttagcaaacggctcgtctacaactttcata  11578700                  --------->MYB46(3)                 ---------->DOF2                --------->MYB52(1)      <-------TEIL               ----------->HVH21    <------ZmHOX2a(1)         <---------ANAC58      --------->ZAT2   ---------->DOF2<---------ARR14(2)              ------     <---------MYB52(1)      --------->MYB46(3) <---------AHL20(2)         ------->GAMYB    --------- ->YAB1  <---------ANAC58   <---------At4g35610<---------ATHB12--------->ARR14(2)  ------>ZmHOX2a(1)   cctcgcagtttgctcgcctaacagctcgtcaacagctaggagttcatcaataaatcgcctaggtggaaactcatcaacagtcttcctagctcatcaacgg  11578800                                                                  --------->ZAT2    --------->MYB46(3)                                                                  <---------At4g35610            <---                                                                  <---------ZAT2  --------->MYB52(1)                     --------->REM1(1)                            --------->At4g35610            ----            --------->At4g35610                             <-----------HVH21    ----------->HVH21     --------->STY1(2)   <----------DOF2                  <---------TOE1(2)    <---------At4g35610 ->GAMYB    <---------At4g35610                          ------>ZmHOX2a(1)     --------->At4g35610<-- >MYB52(1) --------->RAP2.6(2)  <---------At4g35610 <----------DOF2    --------->DOF5.7(2)       ----   tcttcatagctagccgctcatctacaactttcttagctaatagcccattagcaactttcctaggtcgcagctcgttaacagagctaacagctcgttatca  11578900                                   --------->ANAC58                                   --------->ANAC58                             ------>MYB83                             ------>MYB46(1)                           --------->MYB46(3)                           <---------MYB55(2)                          --------->ANAC46               <------NtERF2 ----------->RAV1(1)                    <----------DOF2              <<<<        ---------->DOF2   --------->ANAC58              ----------->GT1                          ---- ------At4g35610          --------->ANAC58             --------->ANAC58                          ---- ----->ZAT2  <---------LBD16--------->ANAC46           --------->ANAC58  <-----------GT1    --------- -------MYB52(2)         ------->GAMYB   <---------ARR11(3)        <---------ICU4           --------- ----->At4g35610        <---------ALFIN1 --------->ARR11(3)     --------->YAB1       --------->HSFB2a(2)   gctaacatttcaaagtcgggataacaacacccaacacgagcaatatctcgtagcaccaaggaaaaatcatcttttctactattccttctccaacaagtca  11579000  Previous    Next  AGI:  At1g32172.1    Description:  other RNA Range:  from: 11578486    to: 11580527    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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