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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
YAB1
--------->
ZAT18
<---------
YAB1
<-------
TEIL
<---------
ICU4
--------->
DOF5.7(2)
--------->
ICU4
------->
MYC3
<---------
YAB1
--------
<-------
MYC2
<----------
DOF2
------>
MYB46(1)
<-------
MYC3
------>
MYB46(1)
<---------
DAG2
--------->
REM1(1)
------->
MYC2
<---------
GLK1(1)
<---------
TOE2(2)
--------->
YAB1
------>
ZmHOX2a(1)
---------
TOE1(2)
------>
MYB83
<---------
At4g35610
------>
ZmHOX2a(2)
--------
ALFIN1
--------->
GLK1(1)
<---------
TOE1(2)
<---------
ICU4
<-------
GAMYB
------>
MYB83
------
HVH21
--------->
ARR11(3)
<---------
ANAC58
<--------
HAHB4
<---------
ANAC58
--------->
AtMYB61
-->
YAB1
<---------
ARR11(3)
<---------
ANAC58
<---------
YAB1
<---------
ANAC58
<---------
ALFIN1
cacacgttcactagaagatttcttcaccaatctcttccttggtttagctactttatcattatcataaacaggcgtttgtgatccttcaccatcccaatct
11561400
=====================
HOX2a_HOX2a
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
======================
HOX2a_HOX2a
<---------
ARR11(3)
<---------
ARR14(3)
--------->
ARR14(3)
<---------
GLK1(2)
<-----------
ARR10
--------->
ARR11(3)
----------------->
AG
--------->
AGP1
--------->
ALFIN1
--------->
KAN4(2)
<---------
AGP1
<---------
O2
<---------
KAN4(1)
<---------
ARR14(2)
<---------
TGA1a
<---------
ICU4
--------->
ATHB12
--------->
ARR14(2)
<---------
bZIP60(2)
--------->
HSFB2a(1)
--------->
ZAT18
<---------
CCA1(2)
==================================
HOX2a_HOX2a
--------->
ZAT14
--------->
At4g35610
--------->
ARR14(2)
<---------
ATHB12
<---------
ZAT14
--------->
YAB1
<---------
ARR14(2)
<------
ZmHOX2a(2)
<---------
ZAT18
<---------
YAB1
<---------
ARR11(3)
--------->
ANAC58
---------->
DOF2
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ANAC58
<---------
YAB1
-
--------->
ARR11(3)
--------->
YAB1
<---------
ANAC58
--------->
YAB1
-
->
ARR14(2)
----------->
ARR10
------>
ZmHOX2a(1)
<---------
ANAC58
<---------
ARR11(3)
---------
ccaatatcatcagccagatcttcatcaaaatcctgaagtggctctgtagatggctcgcgatcattcccaaaatcatcaaagtccactattggctctccat
11561500
----------->
GT1
<---------
LBD16
--------->
At5g28300
--------->
ANAC46
--------->
ANAC58
--------->
GLK1(2)
---------
--------->
ANAC58
<---------
YAB1
------->
TEIL
------->
TEIL
--------->
MYB52(1)
--------->
GLK1(2)
<---------
ATHB12
<---------
At4g35610
-------->
ANAC46
--------->
ARR11(3)
<------
ZmHOX2a(1)
--------->
ARR14(2)
-------->
REM1(1)
--------->
AHL20(2)
------->
TEIL
<---------
TOE2(3)
<---------
ARR14(2)
-------------->
TaNAC69(2)
<---------
ARR11(3)
---------->
DOF2
<------
ZmHOX2a(1)
<---------
ATHB12
ctacatcacggtac
ctggaaaaaaaaaatacaaaatcttatgaatctgaaacacaaaggattcaaatcaataggagattgaatctgcccatgaatcaaaa
11561600
--------->
YAB1
--------->
TOE1(3)
--------->
ALFIN1
>>>>>>>>>
CBP60g
--------->
MYB59
<---------
ATHB12
----
--------->
ANAC58
<------
ZmHOX2a(2)
<-------
TEIL
-------
<----------
DOF2
>>>>>>>>>
SARD1
<-----------------
AGL1
--------->
WOX13(1)
--------
>
YAB1
--------->
ANAC58
---------->
DOF2
--------->
ZAT6
---------->
DOF2
<-----------
GT1
cactctcttttcacaaaaacgaaatcgaaatttgggaaattgaaaagagatcgattttggtaaccctagattcaatcaaaggtgggatttttatctgcac
11561700
--------->
ANAC46
--------->
HSFB2a(2)
------>
ZmHOX2a(1)
-------->
HAHB4
=============
HOX2a_HOX2a
--------->
ATHB12
<------
ZmHOX2a(2)
<---------
YAB1
--------->
ARR14(2)
--------->
LBD16
<---------
ANAC55(2)
--------->
HSFB2a(2)
--------->
ANAC46
--------->
HSFC1(1)
--------->
ANAC55(2)
<---------
HSFB2a(2)
--------->
MYB52(1)
<---------
HSFC1(1)
--------->
At4g35610
<-----------
GT1
--------->
ZAT2
------->
TEIL
<------
ZmHOX2a(1)
<---------
HSFB2a(2)
<---------
ZAT2
----->
MYB52(1)
=======================
HOX2a_HOX2a
<---------
At4g35610
------
-->
ANAC46
--------->
ICU4
<---------
ARR14(2)
--------->
At4g35610
----------
->
ZAT18
---------->
DOF2
<---------
LBD16
<---------
CCA1(2)
--------->
ICU4
aacgaagctaaaaatatgaaatcgaagagaaaggattagaatttac
ggatcatcctcgaaacccat
ttcttctcagcttccagaaaatgattcgaaagag
11561800
--------
<--------
---------
<--------
<--------
<--------
---------
----------
<---------
MYB46(3)
<---------
KAN4(2)
------>
ZmHOX2a(2)
------>
ZmHOX2a(2)
<-----------
GT1
==================================
HOX2a_HOX2a
--------->
ARR14(2)
--------
----->
GT1
--------->
ARR11(3)
*
TSS
<---------
ARR14(2)
<-------
>
DOF2
<---------
ARR11(3)
<------
ZmHOX2a(1)
--------->
GLK1(2)
----------------
ataatttacgaattctttgatcttcgagttgttgtgagaggcgaa
gaggagggaagggaagggaaggaagaatttgggatcgggctactatggaatattc
11561900
--------->
TGA2(2)
<-----------
TGA1
<-----------
HVH21
--------->
ANAC58
<---------
TGA1a
--------->
bZIP60(2)
--------->
bZIP60(1)
<---------
ANAC55(2)
--------->
ANAC55(2)
--------->
ANAC58
--------->
O2
<---------
O2
--------->
ANAC46
<------------
CBF
--------->
TGA1a
--------->
ATHB12
<---------
bZIP60(1)
<---------
YAB1
==============================
MYC_MYB
--------->
ICU4
<-----------
STF1
<-----------
HVH21
<-----------
bZIP910(1)
->
ARR14(2)
<------
ZmHOX2a(2)
-
KAN4(1)
<---------
ARR11(3)
<---------
YAB1
>
HSFB2a(1)
<---------
CCA1(2)
<---------
ICU4
-
HSFB2a(1)
<-----------
GT1
------>
NtERF2
--------->
ICU4
--
TaMYB80
<-----------
GT1
--------->
ANAC58
<---------
AHL20(2)
-
HSFC1(2)
<---------
AHL20(2)
<---------
ALFIN1
--------->
AHL20(2)
<-----
>
KAN4(1)
<---------
YAB1
--------->
ARR11(3)
<---------
AHL20(1)
<-------
>
TaMYB80
--------->
AHL20(1)
--------->
ANAC46
--------->
AHL20(1)
<-------
->
KAN4(2)
--------->
AHL20(2)
--------->
ANAC58
--------->
WOX13(1)
<-------
--
ARR14(2)
--------->
ATHB51
<---------
AGP1
------->
GAMYB
<---------
YAB1
----->
WRI1
<---------
AHL20(2)
------>
ZmHOX2a(2)
--------->
MYB52(1)
>>>>>>>>>>>>
WRKY18
gacggtcacgattgaagaattattttaacagtttagatctcgccacgtcatcaattctctgagtaacagcaattaattagtattgactattgacttcgtg
11562000
<-----------
HVH21
<---------
ANAC58
<---------
ANAC58
<---------
WRKY38(1)
<---------
ANAC46
<---------
ANAC58
<---------
WRKY12
<---------
ANAC55(1)
---------->
ID1
---------->
DOF2
<---------
ANAC58
<------------
MYB.PH3(2)
--
----
ZAT6
---------->
DOF2
--------->
WOX13(1)
----------->
GT1
<---------
ANAC58
--
ANAC46
------->
GAMYB
<----------
ID1
<------
ZmHOX2a(2)
<-------
GAMYB
<---------
ANAC58
--
ANAC58
<---------
At4g35610
========================
HOX2a_HOX2a
<-----------
GT1
---
--
ANAC58
--------->
At4g35610
--------->
TOE2(3)
<------
ZmHOX2a(1)
<----------
DOF2
---
ttaacaaagtcaactgtctctagtcaaaagagacaaaacattagatcaattacttgtgagaggagttgtgagttgtgactaacttttacttgtcgtttga
11562100
--------->
AHL20(2)
<---------
AHL20(2)
------>
MYB83
<--------
------>
MYB46(1)
--------->
ARR14(2)
------->
DEAR3(1)
----------->
GT1
<---------
ARR14(2)
------>
DEAR3(2)
<---------
LBD16
----------->
GT1
<---------
ANAC46
------>
MYB46(3)
<---------
MYB46(3)
--------->
TOE2(3)
<---------
AtLEC2
----
accgactacaaataaatattgatggtttggggatgtttataatctatacatcaaaaatggttaaatcgatatcaaactttgaatggcatatatgctttct
11562200
<---------
WOX13(1)
<---------
YAB1
<------
MYB46(1)
<---------
WOX13(1)
<------
MYB83
------->
TEIL
--------->
ATHB12
--------->
ZAT18
<---------
ANAC58
<---------
TOE2(3)
<---------
YAB1
<---------
AHL20(2)
--------->
YAB1
------>
NtERF2
<---------
DOF5.7(2)
--------->
YAB1
--------->
MYB52(1)
--
DOF2
<---------
ANAC58
<---------
TOE2(3)
------->
TEIL
--------->
TOE1(3)
<-------
TEIL
------>
DOF2
--------->
ALFIN1
--------->
DOF5.7(2)
<---------
YAB1
--------->
At4g35610
<---------
ZAT18
aaagcataagagggcttggtgcctaagattgatgttaacgaatttgaattcaagtatgaatcttgattgcattagcttaacgtcttaaattggtgcatta
11562300
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AGI:
At1g32130.1
Description:
similar to IWS1 C-terminus family protein [Arabidopsis thaliana] (TAIR:AT4G19000.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83660.1); contains InterPro domain IWS1, C-terminal (InterPro:IPR008654)
Range:
from: 11558861
to: 11561845
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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