Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       ---------->ID1                    <-----------GT1            ------->MYC3            ------->MYC2            <-------MYC3            <-------MYC2           <---------ANAC58           <---------ANAC55(1)           <---------O2           --------->TGA1a           <---------TGA1a           <---------ANAC58           --------->O2           <---------ANAC46           <---------GLK1(1)                                             <           --------->ANAC55(2)        --------->GLK1(1)                                  <---------ANAC46           ===============================bZIP_DOF                                      <---------At4g35610           <---------ANAC55(2)    --------->HSFB2a(2)     ----------->GT1            <---------At4g35610    --------->AHL20(2)         <----------DOF2          <----------DOF2             <-----------RAV1(1)    <---------AHL20(2)  ------>ZmHOX2a(1)  ------>ZmHOX2a(1)             --------->AHL20(2)         -   aagaatataaatcacgtgtttttttcctaataacttttagaattcctctctcttctcactttgttaattctacataaaaattggttatgctgcttatact  11552500                                                                                       ---------->DOF2                                                 <---------HSFC1(1)                 --------->HSFB2a(2)                                                 <---------HSFB2a(2)    <---------------AGL15                                                 --------->HSFB2a(2)    --------------->AGL15                                           --------->AHL20(2)          ----------------->AGL3          --------------->AGL15            <---------ICU4              ==============================          ==============================================================================MADS_MADS          <---------DAG2                  <---------AHL20(2)           ----------------->AG          <----------DOF2                 --------->AHL20(2)           ----------------->AGL2       < ----------->GT1                --------->At5g28300        <---------GLK1(1)  --------->DAG2       -- ---------HSFB2a(2)          --------->At4g35610 --------->HSFC1(1)  <-----------GT1<---------HSFB2a(2) -------->HSFB2a(2)---------->DOF2      --------->YAB1     --------->GLK1(1) ---------->DOF2  <------ZmHOX2a(1)   atctggaaaatactttttatgtaaagctcatagctgtaacaaaaataatttctagaatgagatttctgtatttaccaaaaaaagttccaaaaaacaggaa  11552600                                <---------bZIP60(1)            --------------->AGL15        ---------->DOF2            <---------------AGL15     --------->ANAC58                    --------------->AGL15           ===============================================================================MADS_MADS           ----------------->AGL1   ---------->DOF2              --------->YAB1           ------------>CBF     <---------ANAC46            <---------GLK1(2)           ----------------->AG <---------ANAC55(2)--------->AtMYB61   <---------ARR11(3)         <-----------GT1        --------->ANAC55(2)--------->DEAR3(1)  --------->ARR11(3)           <    <---------AHL20(2)         <---------TOE2(3)   <---------ALFIN1<---------YAB1       <---------AHL20(2)   --------->AHL20(2)        ----------->HVH21    <---------MYB55(2)  <---------CCA1(2)--------->AHL20(2) ===========================MADS_MADS --------->ANAC58  <---------MYB52(1)<---------------AGL15 ----- ------ZmHOX2a(1)            ----------->TGA1     --------->MYB46(3)--------->YAB1 --------->ARR11(3) --------->GT1<------------CBF<---------TGA2(2) <---------ALFIN1<---------YAB1     <---------ARR11(3)   caggataaaattttccaattgaagtatacttctgacgtaaaagcaaagctccaccaccgttagattattatcatatctctaaatagattttaaattttgt  11552700                                                                  --------->ANAC46                                                                  <---------ETT(1)                                                                 <---------LBD16                                                               ------>ZmHOX2a(2)                                                              --------->GLK1(1)                                                              <------ZmHOX2a(2)                                                 <---------HSFB2a(1)    <---------MYB55(2)                                                 --------->HSFB2a(1)    --------->MYB46(3)                                                 <---------HSFC1(2)------>NtERF2           --------->ARR11(3)                                                 --------->HSFC1(2)--------->LBD16         <---------ARR14(3)                                             >>>>>>>>>>E2Fe   <---------GLK1(1)            <---------ARR11(3)                                             ----------->GT1 --------->ARR14(2)    <------NtERF2                                             >>>>>>>>>>E2Fa  <---------ARR11(3)   --------->LBD16                                             >>>>>>>>>>E2Fd  --------->ARR11(3)  --------->DEAR3(1)                                             >>>>>>>>>>E2Fc  <---------ARR14(2) <------NtERF2                                            ----------->GT1  --------->ARR14(3) <---------LBD16                                            --------->LBD16  <---------ARR14(3) --------->ATERF1(1)                                       ---------->DOF2     <------NtERF2<---------MYB52(2) <---------GLK1(2)                                      <---------MYB52(1) <---------ANAC46      ------>NtERF2                                   --------->LBD16 --------->GLK1(2)  ----------->RAV1(1)  --------->ARR14(3) ----------DOF2              <<<<<<<<<TBF1<---------LBD16--------->ETT(1)     --------->ANAC46   ---- ----->ID1           <-----------GT1 <-----------HVH21<-----------RAV1(1)------->GAMYB   --------->ICU4   ttctttttaaaaaacattttttgtttccttcttcttccccgttaagcgggaaaattctgtcgggatctccggcaacaaacgcgccggagtcaagattttg  11552800                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                  ---                            ----------->GT1                                                       ---                          <------------CBF                                                      <----                   <----------DOF2                                 --------->TOE1(3)            <----    <---------At4g35610>>>>>>>>>>>>>>>>>LFY           <------------CBF                       ------>NtERF2 ------>ID1    <----------DOF2             <----------DOF2         --------->TOE2(3)        ---------   tctctcaactgcttctcctttctttccccattgtaaatttctaaactttagccagaaattgacccaaaaccctaaaatttgtgtttttggttctccgacc  11552900        <------ZmHOX2a(1)        ===================HOX2a_HOX2a        ====================HOX2a_HOX2a -------->HAHB4      ------>ZmHOX2a(2) <---------ICU4     <------ZmHOX2a(2) --------->YAB1    <---------ARR14(3) -------->ICU4     --------->ARR11(3) ---------ATHB51   <-----------ARR10 ---------ATHB12   <---------ARR14(2)                                            --------->At5g28300 --->MYB83         --------->ARR14(2)                                           ----------->GT1 --->MYB46(1)      --------->ARR14(3)                                        ------>NtERF2      <---- -----MYB59        --------->GLK1(2)                            <----------DOF2<---------DEAR3(1)<--- -------------AGL3 <---------ARR11(3)                <-----------HVH21      ----------->HVH21 ------- >DEAR3(1)        <------ZmHOX2a(1)                 --------->ANAC46       --------->DEAR3(2)<-------   taataatggaggagtctcgaggatcttctgatcaagaagatgaacaaattgttcaagtcagggaagctttaatgtgtcccgacggtgaaaagtttgaatc  11553000                                                                       <---------ANAC58   --------->LBD16                                                                       <---------ANAC46 <---------LBD16                                                               ------>ZmHOX2a(1)      --------->AtMYB61    --------->SPL7                     <---------ETT(2)     ------>MYB46(1)     --------->REM1(2)   --------->MYB52(1)         ------->GAMYB------>NtERF2  <---------MYB59    <---------ANAC46 -----ICU4                   --------->ANAC46         --------->WRKY12 <---------ANAC58--------->MYB52(1) -------DOF2                --------->RAP2.6(3)       --------->WRKY38(1)    <---------ANAC58 >TEIL                  --------->ANAC46  --------->DEAR3(1)------>MYB83     <---------ANAC58 --CCA1(2)    <-------TEIL --------->MYB52(1)       <----------DOF2   <-------TEIL   --------->MYB46(3)   tttacgaacggcgaggttcttaaactacacaacggcatctatcgacgacgatgtctttgaccttcctctcgatgcgtttgtgtgtagaccaccggaaggg  11553100                                                                                                -----                 ------>ZmHOX2a(2)                                                            -------                <------ZmHOX2a(2)                                                             <------               <---------ARR14(3)                                                         ------>NtERF2               --------->ARR14(3)           <-------GAMYB                                <---------ALFIN1               <---------ARR14(2)          <---------MYB46(3)                           ----------->HVH21               <-----------ARR10    <---------GLK1(1)                                 --------->ANAC58               <---------AGP1   <------NtERF2                      <---------TOE2(3)  --------->bZIP60(2)               <---------ARR11(3)   --------->GLK1(1)          =================================MYC_MYB               --------->ARR11(3)  <---------ARR14(2)          <-------GAMYB          --------->TGA1a               --------->ARR14(2)  --------->ARR14(2)         <------MYB46(1)         --------->O2             ----------->ARR10 <---------MYB46(3)         <---------ANAC46            --------->ANAC58        ------->GAMYB         --------->ALFIN1            <---------ANAC58            --------->ANAC55(1)     --------->MYB52(1)   --------->LBD16--------->LBD16 --------->ATHB12             --------->ANAC46   --------->MYB46(3)    <---------LBD16 <-----------HVH21<---------ANAC58          <---------ALFIN1   ------>ZmHOX2a(2)    ----------------->AGL1--------->WRKY12<------MYB83      <-----------HVH21   tttgatccaacggcgaagatctcgtttccagggtggggaactccgtcgttgaactggattgagtgggttaatgtaatggctaagtcacacgccacggtgt  11553200                                                                            <------MYB83                                                                            <---------MYB46(3)                                                                            <------MYB46(1)                                                                           --------->ALFIN1                                                                           <---------DEAR3(1)                                                                   <-----------RAV1(1)                                                                 >>>>>>>>>ARR2    --------->GLK1(2)                                          <---------YAB1   <---------GLK1(1)            <------NtERF2              --------->ATHB12<---------AtMYB61   --------->GLK1(1)          <---------ANAC58            --------->ICU4 <-------GAMYB ----------->GT1 ---->ALFIN1                  <---------ANAC46            <---------YAB1<---------ANAC58 -->ALFIN1                    <---------ANAC58          --------->YAB1  <---------ANAC58        <---- ---ANAC46<---------ANAC46   ---------->ID1            --------->ICU4   <---------ANAC46 <---------ANAC46   ggaagaaatctggtgtttacgatgcgattttggcgtctaggtatcagattaagaggcatgatgatttgattgtggcgttggtggagaaatggtgtattga  11553300                                     <---------TOE2(3)                                     <---------TOE1(3)                                    <---------DOF5.7(2)                                   --------->WRKY12                                <---------ANAC46                             ----------->HVH21                            --------->DEAR3(2)      >>>>>>>>>ARR2                        --------->ALFIN1            >>>>>>>>>ARR1                        ----------->HVH21         <---------YAB1             <---------ANAC46                      <---------ANAC58          --------->CCA1(2)         <---------MYB52(1)                      <---------ANAC58         --------->ARR14(2) <---------ARR14(2)               --                      <---------ANAC46         <---------ARR14(2) --------->ARR14(2)               --                  --------------------->WRI1  <------ZmHOX2a(1)  <------ZmHOX2a(1)               <---                 <---------ANAC58  ----------->TGA1--------->ATHB12      <-------GAMYB           <--- ------ID1       <---------ANAC58 --------->DOF5.7(2)<---------WOX13(1) <---------MYB46(3)<----------DOF2   gacgaatacatttgtgtttccttggggtgaagcgacgttgacgttggaggatatgattgttcttggaggattgtctgttactgggaacaatgctttggct  11553400  Previous    Next  AGI:  At1g32120.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G16050.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G51538.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49973.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68559.1); contains InterPro domain Protein of unknown function DUF716 (InterPro:IPR006904); contains InterPro domain Protein of unknown function DUF1723 (InterPro:IPR013541) Range:  from: 11552906    to: 11558757    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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