Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <-------MYC4     <-------PIF5     ------->MYC2     ------->MYC4     ------->PIF5     ------->MYC3     <-------MYC3     <-------MYC2    --------->O2    --------->TGA1a                                        --------->O2    --------->ANAC55(2)                               ------>MYB46(1)    <---------TGA1a                                   --------->ANAC58    <---------O2                                      --------->ANAC46    >>>>>>>>>>HY5                                     --------->ANAC58   <---------TOE1(2)                                  --------->AtLEC2  <------------OsbHLH66                          ------->GAMYB  <---------ALFIN1                              --------->MYB46(3)                      --------->ZAT6 ----->HSFB2a(1)                       --------->ANAC58    <---------O2                 <-----------GT1 ------HSFB2a(1)                 --------->AHL20(2)   ------>MYB83                    <-----------GT1 ---->GLK1(2)            --------->ARR14(2)   <-----------GT1                        <-----------GT1 ----GLK1(2)      --------->GLK1(1)    --------->ANAC58--------->MYB46(3)       --------->MYB52(2) >YAB1 <-----------HVH21 <---------ARR14(2) <---------MYB52(2)                <---------MYB52(1)   tctcccacgtgtcaattcaaatatccaaatcccaaaaaaataagcaaataaccaccaagcaacgtctccctccatgccctgttagttttatcacttcatc  11532100                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                   <-           ------>ZmHOX2a(1)                                                               --------->AHL20(2)       <---------ALFIN1                                                                  ----------->GT1       --------->ANAC46                           --------->AHL20(2)--------->YAB1     xxxxxxxxxxxxxx     <---------ALFIN1                  <----------DOF2             <---------YAB1 --------------->AGL15    --------->ZAT14                 <---------ARR11(3)           <-----------GT1  <---------------AGL15 --------->At4g35610                --------->ARR11(3)     --------->YAB1      <-----------GT1   ----   ggcaactccactcctctcccaaactctattctccaaattatcttttagccaaaaaaatcaaacaaaattaccataagtttattacttcatgaagtaaata  11532200       <----------DOF2      ------>ZmHOX2a(2)     <---------YAB1    --------->ARR11(3)    <---------ARR11(3) -------->CCA1(2) ------->ARR11(3) ------->ARR11(1)                                                                          --------->ANAC46 --------ARR11(3)<---------AHL20(2)                          <---------ARR11(3)     <---------ICU4 xxxxxx>smallRNA(se3)     <---------YAB1      <---------CCA1(2)                  --------->YAB1 ------->ARR10  <---------AHL20(2)         ------>ZmHOX2a(1) --------->ARR11(3) <---------ATHB12   <-   agatatgatctttggttttttaatggctataaatgttttcttatcctcttatcttatcaacaacatcttaacatagagactaatcaacattacaaacaat  11532300                                       <---------ALFIN1                                       ------->GAMYB                                       ----------->RAV1(1)                                      --------->MYB46(3)                                 --------->ANAC58                                 --------->ANAC58            --------->AtMYB61    --------->ANAC46      --------->ANAC46      --------->YAB1      --------->ANAC58      <---------ICU4--------->TOE2(3)      --------->ANAC58     <---------ATHB12 ----------GT1           --------->WOX13(1)      --------->AtMYB61       <----------DOF2       <-----   tttacttcaagaaaccaaaacatgagccaatcatcacacaaccacattaaaccaaaacaaaacaaaataaaactccttttcttctctgcaaattgccatc  11532400                                                                                              -------                                                    --------->YAB1                            -------                              <---------CCA1(2)     --------->TOE2(3)                         -------                      ------>ZmHOX2a(1)         <---------AHL20(2)                          <--------      ------>ZmHOX2a(1)  ------>ZmHOX2a(1)     --------->AHL20(2)           <-----------GT1--------->ANAC46 ----At4g35610 <------------CBF       <----------DOF2                  --------->AHL20(2)<-----------GT1   tgtttttcctatagacccattgtcctcctctcatttctctctttccccatttaatcttattttcaaaaaaaaaaaaaatcacatctctatatcaccacac  11532500                                                                      --------->At4g35610                                                            --------->ANAC58                                                            --------->ANAC58       --------->AHL20(2)                                   --------->ANAC46---------->DOF2    --------->TOE1(3)                                  <---------ICU4 <---------ZAT2    --------->TOE2(3)                                 ------>ZmHOX2a(1) --------->ZAT18 -->ANAC58                        <----------DOF2 --------->ARR14(2)  --------->ZAT2 -->ANAC58                <---------ALFIN1        <---------ARR14(2)  <---------At4g35610        ---- -->ANAC46           <---------MYB52(1)        ------>ZmHOX2a(1)  --------->TOE1(3)              <--- -ALFIN1     *TSS    --------->DOF5.7(2)      --------->TOE2(3)  ----------->RAV1(2)         --------   aaaaaaccataaaatcaaaaatcgttacccacatttctttcattctatcctaaatcctcatcactcaacctgagctcacaaagctaaacaaaaaaaaaag  11532600                                 ------>MYB46(1)                                 ------>MYB83                               <---------MYB111(1)                               <---------MYB46(2)                               --------->AtMYB61       <------NtERF2           --------->MYB46(3)      --------->LBD16         --------->ANAC58     <---------DEAR3(1)       --------->ANAC46                             <---------ARR11(3)    <---    <---------LBD16           --------->ANAC58                           xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----->ARR11(3)             <----------ID1                               --------->ANAC58     ------- ------ARR11(3)        --------->AtMYB61                                 --------->ANAC58  <---------CCA1(2) -->DOF2          <------ZmHOX2a(1)  --------->ANAC46           --------->ANAC46      <---------At4g35610   agcttaggcggagaagaagaggagaccaaaacaccaaacaaacaacaatggctgtctcaactatctactcaacacaagctctcaattcaactcatttctt  11532700                                                       --------->TOE2(3)                                                      --------->MYB46(3)                                                     ------>MYB83                                                     ------>MYB46(1)                                                    --------->MYB55(1)                                                    --------->MYB52(1)                          -----                                                   --------->AtMYB61              <---------ZAT18                                                  --------->MYB46(3)             <---------ANAC58                                            ------->GAMYB               --------->YAB1      ---------                                            --------->TOE2(3)           <---------ICU4 --------->ANAC58                                           --------->MYB46(3)         --------->ANAC58 --------->ANAC58                                         --------->WOX13(1)   <-------TEIL       <---------ANAC58          ------>ZmHOX2a(1)           <-----------HVH21------->GAMYB  --------->ANAC58 --------->ANAC46 --------GT1                 ------>ZmHOX2a(1)<---------MYB52(2)   ------->GAMYB <---------ANAC46 -->TOE2(3)  ------>ZmHOX2a(1)       <---------ETT(2)-------->P   <---------ALFIN1--------->ZAT18 <--   aacctcttcttcctcctccaaacaagtcttcctctaccgtcgtcaaccacaaaccaaccgtagattcaacacactcatcacttgcgcacaagaaaccatc  11532800                           --------->LBD16                           ----------->RAV1(1)                         --------->At4g35610                         <---------At4g35610                                   --------->ANAC46                         --------->ATERF1(1)                                   --------->ANAC58                         <------NtERF2 <----------DOF2                     <---------At4g35610                         <---------LBD16                                   --------->At4g35610<------NtERF2                        <---------ATERF1(1)                              <------NtERF2       --------                        <---------ERF1 <---------DAG2                   <---------At4g35610 <--------         --------->At4g35610          --------->TOE2(3)                <---------DEAR3(1)  <---------LBD16         <---------At4g35610<------NtERF2                             --------->ATERF1(1)--------->DAG2  ------>ZmHOX2a(2)     <---------RAP2.3(1)                           <------NtERF2  --------->AtMYB61 <---------At4g35610   <---------RAP2.3(3)                           <---------ERF1------>NtERF2 --------->At4g35610   <---------DEAR3(1)        <---------ATERF1(1)<---------RAP2.3(3) ---------->DOF2 ---->YAB1  <---------At4g35610     ------->TEIL<---------DEAR3(1)  <---------DEAR3(1) ---------->DOF2 >MYB46(3)  --------->At4g35610---------->DOF2--------->LBD16    <---------AtMYB61--------->RAP2.6(2) -------YAB1--------->ZAT2 ------>NtERF2    <---------LBD16    <----------DOF2 --------->ANAC58   gtgatcggactagctgctgactctggctgcggcaaaagtacctttatgcggaggctcaccagcgtctttggtggcgctgctaagccaccaaaaggcggga  11532900                                                                                ---------->DOF2                                                                                =====================                                                                               <------ZmHOX2a(1)                                                       <---------YAB1         <------MYB83                                                     <-----------GT1          <------MYB46(1)                                       --------->At4g35610                  =========================                       ----------->RAV1(1)    --------->ICU4                <--------P                      ----------->HVH21<---------At4g35610               --------->ANAC58                     <---------------------WRI1   <---------ICU4         --------->ANAC58           =                     --------->At4g35610------>ZmHOX2a(2)               <-------TEIL                <                --------->YAB1 --------->AtMYB61  --------->ATHB12      --------->SPL7         <-----              --------->ANAC58 <---------ALFIN1  <---------YAB1      <------MYB83        ============              --------->ANAC58--------->MYB46(3) --------->ICU4      <------MYB46(1)     ---------->DOF2 ->LBD16   ------->GAMYB   --------->ANAC58 <---------ANAC58        <---------------AtSPL3    <------ -ANAC46  <---------ALFIN1 --------->ANAC58 <---------ANAC58        --------->MYB59  --------->At4g35610   accctgattccaacacactcatcagcgacacgaccactgtgatctgtcttgatgattaccattctttggataggtacggtaggaaagagcagaaagtcac  11533000  Previous    Next  AGI:  At1g32060.1    Description:  PRK (PHOSPHORIBULOKINASE); ATP binding / phosphoribulokinase/ protein binding. Identical to Phosphoribulokinase, chloroplast precursor [Arabidopsis Thaliana] (GB:P25697); similar to uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative [Arabidopsis thaliana] (TAIR:AT3G27440.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78901.1); contains InterPro domain Phosphoribulokinase; (InterPro:IPR006082); contains InterPro domain Phosphoribulokinase/uridine kinase; (InterPro:IPR006083) Range:  from: 11532513    to: 11534619    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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