Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------AHL20(2)                                                                --------->AHL20(2)                             ------->GAMYB                      <---------AHL20(2)                  <                          --------->MYB52(1)            <---------ANAC55(2)                     <----                          --------->ARR14(2)            --------->ANAC55(2)                     <----                          <---------ARR14(2)            <------MYB83  --------->AHL20(2)       <-----                 <---------TOE2(3)                      <------MYB46(1)               <----------DOF2 ------->At4g35610    ----------------->AGL1           --------->MYB111(1) --------->MYB52(1)  <----- --------At4g35610  --------->PCF2                     --------->MYB59<---------AHL20(2)  <---------AtLEC2   cagctaaactgaagaaattaaggtcccataaccgagaagtttgtcaaaagtttatattaggtatttttaaatttaaataacagataaactttacatggct  11514200     --------->ARR11(3)     <---------ARR11(3)     <---------ARR14(3)     <---------ARR14(2)     --------->ARR14(2)     --------->ARR14(3)                                                     ----------->GT1 ---------YAB1              --------->ZAT18        <---------YAB1 ----------->GT1 -----DAG2    <---------RVE1(1)               <------ZmHOX2a(1)  --------->YAB1 ------DOF2   <---------CCA1(1)         --------->ZAT14         <---------ATHB12 ----ANAC58  --------->ARR11(3)         <---------ZAT14       --------->WOX13(1) ----ANAC58  <---------ARR11(3)    --------->MYB46(3)   <---------YAB1    ---------->DOF2 <----------   ttatcaatatcttcagatattttagataagtccagtaaccactgtagaggattatgttattagtcaatcagtaacttaaagttaaaaactattaactaat  11514300                      --------->AHL20(1)                      <---------AHL20(2)                      --------->AHL20(2)                  --------->AHL20(2)           --------->TOE1(3)                                                   <---------ANAC55(2)           --------->TOE2(3)                                            <---------ANAC58           ----------->GT1                                              <---------ANAC58          ----------->GT1                                           <---------ANAC58         <-------TEIL<---------AHL20(2)                      --------->HSFB2a(2)      ---------->DOF2     <---------------AtSPL3                                  <---------HSFB2a(2) --------->AHL20(2)     <---------------AtSPL8                                 <---------LBD16    --------->ANAC58    ---------->DOF2  --------->AHL20(2)                     <---------ANAC46   ----------->GT1<------ <----------DOF2 --------->AHL20(2)                        <---------LBD16     --------->ANAC58  ---- -GT1--------------->AtSPL8 <---------TOE2(3) --------->AHL20(2)    <---------ANAC58  --------->MYB52(1)   ccactttaaagtacgttaaataaaaaaattaagaaacagaaaccaaaaaaaaatggaaagtttcgggaaggcttgggtatcaagtaaataaaggagtatt  11514400                                                                            --------->DAG2                                                                           ---------->DOF2                                                                     --------->ANAC58                                     --------->ARR14(2)         --------->DAG2                        <-----------GT1                     <------ZmHOX2a(1)               <--------                  ------>ZmHOX2a(1)  <---------ARR14(2)<---------REM1(1)   --------->DAG2 <---------AHL20(2)  --------->At4g35610 <---------AHL20(2)              <---------TOE2(3)   ---------->DOF2--------->AHL20(2) ------CBF------------>CBF    ------>ZmHOX2a(1)   <------------CBF   --------->ANAC58 --------->AHL20(2) ----->YAB1      <---------MYB59<----------DOF2 <---------YAB1---------->DOF2    <------NtERF2   gataagctctctaccaattcctaatttatctcctctttggattcgaaacccttattgatgtaggaaaaggcaaacaaaaaggcagagattatttaatgta  11514500                                                                                                    <                                                                                                    -                                                                                                    <                                                                                         --------->ARR11(3)                                                                                         <---------ARR11(3)                                                                                        <---------ICU4                                                                                        --------->YAB1                                                                                        -------->HAHB4                                                                                       <---------YAB1                                                                                       --------->ICU4                                                                                    <---------YAB1  -                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(1)                                                                                   <---------AHL20(2)                                        <----------DOF2                           --------->YAB1    -                                     <-----------GT1                             <---------YAB1     <                                 <----------DOF2                             --------->ANAC55(2) <--- -TOE2(3)                        ------>ZmHOX2a(1)                  <---------TOE1(1)--------->YAB1<-   agagaggcactctctctctcccccttctctctatccttttttctttagaacttcgagtttttggtctgatacgatgtctacgtattataatgatcatctc  11514600     --------->LBD16    <---------ANAC46   --------->At4g35610   <------NtERF2   <---------LBD16   <---------At4g35610  <---------ERF1                                       <---------MYB52(1) <---------DEAR3(1)                                   <-------GAMYB                             ----- ---------ZAT2                                   <---------ANAC58                           --------- -------->At4g35610                              <---------ANAC58                          ---------- ---------At4g35610                             <---------HSFB2a(1)                        <--------- -------->ZAT2                                  --------->HSFB2a(1)                        ========== -------->ATERF1(1)                             <---------HSFC1(2)                  ------>ZmHOX2a(2) ------NtERF2                                   --------->HSFC1(2)                <---------ARR11(3) ------LBD16<------ZmHOX2a(1)               <---------MYB46(3)   <----------ID1 <---------MYB52(1)--- --------ATERF1(1)                       <---------ANAC46        --------->ANAC46 --------->ARR11(3)   gcggctgcggagaaggacataagctcgagtaatttctgtaatttagtggatgcttccgttatgttatacgacgaagaacaccgtgatcttcttccaaaga  11514700                                                                                                 <---                                                                                            <--------         <---------At4g35610                                                                <-------GAMYB         --------->At4g35610                                                         --------->ARR11(3) --------->ZAT14                                                                     <---------ARR11(3) ----->DOF2                                                                   ---------->DOF2  <----- ->DOF2<-----------RAV1(2)            ---------->DOF2            ------>ZmHOX2a(2)   --------->ARR14(2) ----->AGL15             ---------->DOF2    ----------->GT1    --------->ARR11(3)    <---------ARR14(2) ------AGL15    --------->ANAC58  --------->ANAC58      --------->GLK1(2)<---------------AGL15<------ ========================================================================================MADS_MADS  < -------->GT1   --------->ANAC58  --------->ANAC58     <---------GLK1(2) --------------->AGL15-------   aagtaaactccagatgccaagcgaagacaaagaaacaagaaaaagagagtgacaagagattctttgatctcttccctaaaaaaagaagaacttcggttgt  11514800                                                                                                    =                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                             --------                                 <---------YAB1                                    <---------MYB52(1)                             <---------ARR14(3)                                   --------->LBD16   =                             <---------ARR11(3)                              <------ZmHOX2a(2)      -    --------->ANAC58         --------->ARR14(3)                             --------->ARR14(2)      -    --------->ANAC58         --------->ARR14(2)                             <---------ARR14(2)      < --------GT1                 --------->ARR11(3)                         --------->ZAT6     --------->At4g35610 -MYB52(1)                   --------->GLK1(2)                     --------->TOE1(3)       ---------- --GAMYB                ------>MYB83                               --------->TOE2(3)       <---------At4g35610 ---MYB46(3)            ------>MYB46(1)                       ------>ZmHOX2a(1) <---------LBD16     - ---------ZAT6         ----------->RAV1(1)                    --------->HSFB2a(2)--------->LBD16  <-- -->MYB52(2)         --------->MYB46(3)                       ======================HOX2a_HOX2a------   tactgtaagaaaccctgaacaaaaccaacaaaatcttcatagggtttctacttcttcatcgctcctcgaccttaacacgatccccggtgattcttctgac  11514900        ------->TEIL      ------->GAMYB     <---------MYB52(2)   --------->MYB52(1) =============MYC_MYB -------->ANAC55(1) ---------O2 -------->ANAC55(2) ---------ANAC55(2) -------->ANAC58 -------->ANAC46 -------->O2 --->HVH21 =============================bZIP_DOF                    ---------->DOF2 -------->TGA1a                                         <---------ANAC55(2) -------->bZIP60(2)                                     --------->ANAC58 ---------TGA1a                      <---------ICU4     <---------YAB1                 <<<<<<<<<TBF1 ->RAV1(2)                    <<<<<<<<<TBF1  <---------ANAC58            ---------->DOF2           <- -------->ANAC58       <-----------GT1       <---------ANAC58         ----------->RAV1(1)      <----- -------ALFIN1        <---------CCA1(2)      <---------ANAC46      --------->ANAC46 <<<<<<<<<TBF1  <- --->PCF2          <----------DOF2  <---------YAB1      --------->ANAC58--------->ANAC46       <-----   ccacgtaacgaacttcaagggcttttatcttcttcttcatcatcgtttcttggagattacgaaaggaaaaccccacaaaacgcttcttcttcttcaactt  11515000                                      --------->TOE1(3)                                      --------->TOE2(3)                                   ------>MYB46(1)                                   ------>MYB83                                 <---------MYB111(1)                                 <---------MYB55(2)                                 --------->MYB46(3)                                 <---------MYB46(2)                                 --------->AtMYB61                                 <---------MYB111(2)                                       --------->ANAC58                                --------->ANAC58                                           --------->ANAC58                                --------->ANAC46                                         ---------->DOF2                                --------->ANAC58                                    --------->TOE1(2)     --------------->AtSPL8    ------>MYB46(1)                                    ------->TEIL------- --------ANAC58                ------>MYB83                                     <---------ZAT18 -----DOF2                    --------->ANAC46                  ---------->DOF2 --------->ZAT14 --------ANAC58              --------->MYB46(3)      --------->ANAC58    <---------ZAT6--------->ANAC58 ----DAG2      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->ANAC58    <---------YAB1--------->ANAC58   tacttgctgagtacaacaccgagatggcaaacccaccaaaccctaattctgagacaagcctcaagagaaagcatagtgatagtgaacccaagaaagcaaa  11515100  Previous    Next  AGI:  At1g32030.1    Description:  DNA binding. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT5G24050.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68049.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain Protein of unknown function DUF313 (InterPro:IPR005508) Range:  from: 11514574    to: 11515575    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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