Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->YAB1                                    --------->ICU4                                  -------->HAHB4                                  --------->YAB1                                                  <--         <---------ALFIN1         <---------ICU4                                                 <---       ------->TEIL              <---------ATHB51                                                <---    --------->ANAC55(2)          <---------ATHB12                                                ----    --------->ANAC46             --------->ICU4                                       <------ZmHOX2a(1)    <---------ANAC55(2)  <---------ANAC58              ---------->DOF2               ----------->GT1   --------------->AtSPL8<---------ANAC58          <---------ANAC58                --------->At4g35610  <-----------GT1      --------->ARR11(3)          <---------ANAC46             <---------At4g35610 -->GT1--------->SPL7  <---------ARR11(3)          <---------ANAC58      <---------AHL20(2)      ----   atttatacgtaccactgtttatcaagttcttgctaataatgatgttgttgagagcgtgaaagagcaacgatatatataatgaagcagaggaaaaaacaat  11456700                                             <---------RVE1(1)                                 ------                                            --------->ARR11(3)                                -------            --------->AHL20(2)<---------AHL20(2)          --------->ARR11(3)                  -------            <---------AHL20(2)--------->AHL20(1)          <---------ARR11(3)             <---------AHL20(1) -------AHL20(2)              --------->ARR11(3)         --------->GLK1(1)               <---------ARR11(3) ------AHL20(1)               <---------ARR11(3)       --------->YAB1                    --------->ARR11(3) ------AHL20(2)               --------->AHL20(2)      <---------YAB1                  --------->AHL20(2) ----->AHL20(2)  --------->DAG2          <---------------------WRI1                   --------->YAB1 ----->AHL20(1)---------->DOF2<---------AHL20(1) <-----------GT1---------->DOF2    --------->YAB1   ttatttcacaaaaattaaaaaggcaagagaaatatatttctaatacgatatttactatgatatctacaaagttaacaaaactctacaataatatatcctt  11456800                                 --------->LBD16                                <---------ANAC58                                <---------ANAC55(1)                                <---------ANAC58                                --------->ANAC55(2)                                <---------ANAC55(2)                                <---------ANAC46                             --------->GLK1(2)                            <---------ARR14(2)                            <---------GLK1(2)                            --------->ARR14(2)                              ------>ZmHOX2a(1)                           <---------At4g35610                             --------->TOE2(3)                       <-----------HVH21                                --------->GLK1(2)          <---------GLK1(2)--------->At4g35610                         <---------GLK1(2) >ZmHOX2a(1)       <---------ARR14(2)                --------->ICU4--------->ANAC55(2)        ------- -->TOE2(3)        --------->GLK1(2)            ----------->GT1    <---------ANAC55(2)       -------- -->TOE1(3)        --------->ARR14(2)        <----------DOF2   --------->GLK1(2)         --------->ICU4   aagaatgagaaagattgtgagaatatgtcagattccgtgatacaatacttttgtaaatattagagaatcacgagattcctaaactattgtagtcattaaa  11456900                                                                        --------->At5g28300                                                                       ----------->GT1                                                                   --------->ZAT18                                                             <--------ATHB1                                                             -------->HAHB4                                                             <---------ICU4                                                             --------->ATHB51                                                            <---------AHL20(2)                     --------->AHL20(1)                     --------->AHL20(2)                    ---                     <---------AHL20(2)                     <---------YAB1                        ---       --------->WOX13(1)                                   <---------ATHB51                    -----   --------->ANAC55(1)     <---------------AGL15            --------->ICU4                  ---------   --------->ANAC58  <---------AHL20(1)                    <---------AHL20(1)               ---------   --------->ANAC58  --------->AHL20(2)                 --------->AHL20(2)     --------->AHL20(1) <--   --------->ANAC46 --------->AHL20(2)                  <---------AHL20(2)     --------->ARR11(3) <-- -->YAB1 <---------ATHB12  --------------->AGL15 <---------At4g35610 <---------ANAC46<----------ID1<- ->AHL20(2) <---------YAB1<-----------------AGL2 --------->At4g35610 --------->At4g35610  --------->MYB52(1)   aatccacgtaaatcaagattgaataaattccacttagggtttttgtttttatgctgaataaaataattgtgggctgtaacatatattgggccaaacgaaa  11457000                                                                                          <---------RAP2.6(3)                                                                                          ------>NtERF2                                                                                         ----------->HVH21                                                                                         --------->DEAR3(1)                                                                                         --------->RAP2.6(2)                                                                                        --------->SPL7                                                                                       <------NtERF2                                                                                       ------>NtERF2                                                                                       <---------At4g35610                                                                                       --------->At4g35610                                                                                       --------->ATERF1(1)                                                                                       <---------DREB2C(1)                                                                                       --------->DREB2C(1)                                                                                       <---------ATERF1(1)                                                                                      <---------SPL7                                                                                      ------>NtERF2                                                                                      <---------RAP2.3(1)                                                                                     <---------RRTF1(2)                                                                                     <---------DREB2C(2)                                                                                     <---------RRTF1(3)                                                                                     <---------ANAC58                                                                                     <---------RAP2.3(3)       <---------YAB1                                                                <---------ATERF1(2)     <---------ZAT6                                                                  <---------RAP2.3(2)    <---------YAB1                                                                   <---------ANAC58  <---------ICU4                                                                     <---------DEAR3(1) --------->ICU4               --------->AHL20(2)                                     --------->ATERF1(2) ------>AHL20(2)              <---------AHL20(2)                          --------->TOE2(3) ------>ICU4          --------->YAB1                                     ----------->GT1--------->DEAR3(2) ---->YAB1         ------->GAMYB                               <---------TOE1(3)     <---------RAP2.6(2) >ANAC58          <---------MYB55(2)                           <---------TOE2(3)    --------->RAP2.6(3) >ANAC58          <---------MYB111(2)                     --------->WOX13(1)    <---------ICU4    <<< -------ATHB51    <---------MYB52(2)                    ------------>CBF<---------TOE2(3)--------->DREB2C(2) -------AHL20(2)  --------->MYB46(3)                --------->AHL20(2)  <---------TOE1(3)<---------ETT(2) --------ICU4   ----------->RAV1(1) ---------->DOF2 <---------AHL20(2)<---------AHL20(2)--------->ATERF1(1)   ataattagtattatgggccaacaaacataagtttaaatgaaagcccatacatattaaaatcaattagggtttttaatgttaaacatggcggccgaccttc  11457100                              --------->ANAC58                              --------->ANAC58                        --------->ATHB12                                                 <-------TEIL                        --------->YAB1                                                <------MYB83                     <---------ICU4                                                   <------MYB46(1)                  --------->ANAC55(1)                                                 <---------DEAR3(2)                  --------->ANAC55(2)                     ----------->GT1            --------->MYB52(2)       ------>ZmHOX2a(1)-------->HAHB4                   --------->ALFIN1           --------->SPL7      --------->TOE2(3)--------->ICU4                    <---------AtMYB61         <---------MYB52(1)      *TSS        <---------ANAC55(2)                  <---------ANAC58           <---------SPL7    <      --------->TOE1(3)<---------YAB1                  <---------ANAC46        <---------At5g28300<-- <<<<<<<<<TBF1    --------->ANAC46          --------->At4g35610               <-----------GT1   ----- <<<<<<TBF1   ----------->RAV1(1)     <---------LBD16  <---------ANAC58  ----------->GT1<-----------HVH21   ttcttcttccttaagacaacacataatgatagaagcaaactggggaagatgaagatggagtggtgaagaacaaaaccgtataaccgttcggttcagaggt  11457200                 ---------->DOF2               --------->LBD16              <---------ANAC55(2)           -------->P           ------>MYB46(1)         ----------->HVH21         --------->DEAR3(1)        --------->DEAR3(2)        --------->MYB46(3)      ------>MYB46(1)      --------->MYB52(1)     ------>ZmHOX2a(1)      ------>MYB83           ========================HOX2a_HOX2a    <---------MYB59          =========================HOX2a_HOX2a   --------->DEAR3(2)       --------->TOE2(3)     <---------MYB52(1) <---------ARR14(2)      --------->ARR14(2)   <------ZmHOX2a(2)              ------>NtERF2 --------->MYB52(1)      <---------ARR14(2)  <---------ARR14(2)             <---------ANAC46       <- --------->ARR14(2)     --------->GLK1(1)    --------->ARR14(2)            <------NtERF2       <----- ---------SPL7--------->ANAC58      --------->ARR11(3)                <---------DEAR3(1)     <------- ----NtERF2------>MYB83 <---------GLK1(1)   <---------SPL7<---------ZAT6  ------>NtERF2  <-----------RAV1(1) ---->ALFIN1  --------->ANAC58  ---------->DOF2------>ZmHOX2a(2)    --------->TOE2(2)   <------------AtMYB77   gccgaaccgaaccgacccgtaaaccgaaatcctcaaaagaaattgccgatcggtttgctactgttcaaaacctcggtgccgagaaccgaaactgtcggtt  11457300                                                                                             --------                                                                                             <-------                                                                                           ------>NtERF2                                                                                        ------>NtERF2                                                                                       --------->DEAR3(1)                                                                                      --------->ATERF1(1)                                                                                      <------NtERF2                                                                                     <---------ATERF1(1)          --------->GLK1(1)                                                          ------>NtERF2          <---------GLK1(1)                                                         <---------DEAR3(1)    <---------ARR14(2)      --------->GLK1(1)                                    <---------DEAR3(1)    --------->ARR14(2)      <---------GLK1(1)                                   <---------At4g35610 ----------GT1       <---------ANAC58        <------MYB83<-----------GT1  <----------DOF2 --------->DEAR3(1) ----MYB52(1)        <---------ANAC58        <------MYB46(1)        <---------ANAC58--------->DEAR3(1) --DEAR3(2)       <---------MYB52(1)        --------->MYB59         <---------ANAC58----------->HVH21   ttttcggttcgggtttctcggtttcttccgaactcccaggcctagtttggttttatttttcacgagttttgcttctcttttcatcggcgacgacgacgtc  11457400                                                                                      --------->ALFIN1                                                                                    --------->ALFIN1                     <------ZmHOX2a(2)                                             <-------MYC3                    --------->ARR14(2)                                             <-------MYC2                    <---------ARR14(2)                                             ------->MYC2                 <---------TOE1(3)                                           <------NtERF2                 <---------TOE2(3)                                          ------>NtERF2   <------ZmHOX2a(2)                <---------DOF5.7(2)                                        <---------DEAR3(1)              --------->DOF5.7(2)                                     <---------ARR14(2)   <---------ARR14(2)             --------->TOE2(3)                                        --------->ARR14(2)   --------->ARR14(2)             --------->TOE1(3)     <---------ETT(2)               --------->REM1(2)------->MYC3 --------->GLK1(2) ------->GAMYB   --------->ETT(2)            <---------ANAC58   <---------TGA1a ->O2  <<<<<<<<<WRKY18------>ZmHOX2a(2)                        <---------ANAC46  ------->TEIL --O2<-----------HVH21--------->DEAR3(2)                       <---------ANAC58<---------SPL7------>ZmHOX2a(2)   gagtttctgtcaaaacgttaacgatccgactcgagcgtcgacagtaagagaagaagacagcgattgtgtgtagatcgacggcgaacgtgtgtcgatccgt  11457500                                                        <------ZmHOX2a(2)                            <---------ARR14(2)         <-----------ARR10                            --------->ARR14(2)         --------->ARR14(2)                          --------->LBD16              <---------ARR14(2)                        =====================================HOX2a_HOX2a               --------->ANAC55(2)                     <---------AGP1               <---------ANAC55(2)     <---------ARR14(2)            --------->GLK1(2)          --------->ARR14(2)------>ZmHOX2a(2)            <---------ARR14(2)    <------ZmHOX2a(2)    --------->GLK1(2)            --------->ARR14(2)    ===========================HOX2a_HOX2a     <---------LBD16    ------>ZmHOX2a(2)              --------->ARR11(3)   <---------ETT(2)    <------ZmHOX2a(2)               <---------ARR11(3)   --------->ETT(2)   --------->ARR14(2)              <------ZmHOX2a(1)             --------->At4g35610   ----------->HVH21  <---------ARR14(2)            <---------TOE2(3)       --------->YAB1      -----   ctcgatcgacggagaatacgtttcgatccggtttcgatccaaatcggagagtttgaggatctaaatcggaaattgcattaatactcatctccaatctctt  11457600  Previous    Next  AGI:  At1g31910.1    Description:  GHMP kinase family protein. similar to phosphomevalonate kinase [Hevea brasiliensis] (GB:AAL18926.1); contains InterPro domain Ribosomal protein S5 domain 2-type fold (InterPro:IPR014721); contains InterPro domain Phosphomevalonate kinase, ERG8 (InterPro:IPR016005); contains InterPro domain GHMP kinase, C-terminal (InterPro:IPR013750); contains InterPro domain Phosphomevalonate kinase, eukaryotic (InterPro:IPR005916); contains InterPro domain GHMP kinase; (InterPro:IPR006204) Range:  from: 11457106    to: 11461805    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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