Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                         --------->ANAC46   --------->MYB52(1)                                                                    <---------ETT(1) ---->MYB83                                                    <----------DOF2           ----------->HVH21 ------->ANAC46           --------->GLK1(1)         ----------->GT1                     --------->MYB46(3) ---->MYB46(1)            <---------GLK1(1)        <---------TOE1(3)                   --------->ANAC46 ------->ANAC58      ---------->DOF2              <-----------RAV1(2)                 -------->P ------->ANAC58 <---------------AGL15          <---------At4g35610                <-----------GT1   - ------->AtLEC2 --------------->AGL15          --------->At4g35610              <-----------GT1    -- --->HVH21   --------->GLK1(2)                ------->TEIL---------->DOF2   <----------DOF2   -------   caagcaaacgatgagcatcttaaaaaagaaatccaaactctaaaaatgaagctcaggttaaaaagcttttccttctctcttttttctctacccgacatgt  11436200     --------->ICU4           --------->ZAT2   <---------ICU4             ----------->RAV1(2) --------->At5g28300          <---------At4g35610 ---ANAC55(2)                 --------->At4g35610 -->ANAC58                   ------->TEIL -->ANAC58                --------->ANAC58                           <---------ATHB12           ----- -->ANAC55(2)             --------->ANAC58 ----------->GT1>>>>>>>>>RAP2.2                  --------->TOE1(3) ---------->GT1         <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <---------YAB1           --------->TOE2(3) ------->ZAT6     ---------->DOF2 <<<<<<<GRF7             --------->TOE2(3)            <---------AHL20(2) -->ANAC55(1)  <-----------HVH21----------->HVH21         --------->YAB1               --------->AHL20(2)   aacagtaattactcatatgtcaaagagtaagcacctgacaatgtctggttcaatattcaatctaaattctaatcgttcttagataacaattaaacttaac  11436300                                                                                          --------->ANAC46                                                                                          --------->ANAC58                                                                                       <---------ZAT18               --------->KAN4(2)                                                       --------->ZAT14              <---------HSFC1(2)                           <---------ANAC58        <---------ICU4 ---              --------->KAN4(1)                       --------->TOE1(3)            --------->ATHB12              --------->HSFB2a(1)             --------->ARR11(3)                   --------->YAB1 ---              <---------KAN4(1) <---------YAB1<---------ARR11(3)                  <---------YAB1  ---              --------->HSFC1(2)<---------TOE1(3)     --------->TOE2(3)         --------->YAB1 ------              <---------HSFB2a(1)       --------->ANAC46   <---------ANAC58    <---------YAB1  <----- ---->ZAT6   <---------KAN4(2)  <---------TOE2(3)  <-----------GT1          <---------YAB1--------->ANAC58   acgattccattgcagaacattctatctataagttaagattacacagaagatgtttaccttagcttgaagagcaatgttcttattatcattgcacgcgaat  11436400         ------>ZmHOX2a(2)        <---------At4g35610        <---------GLK1(1)       --------->ARR11(3)                                                                      ------       <---------ARR14(2)                                                                      ------       --------->ARR14(2)       ---------->DOF2                                                ------       <---------AGP1     <---------ARR11(3)                                                 <------- ------>ANAC58            --------->ARR11(3)            <---------At4g35610                 <-------- ------>ANAC46     <---------At4g35610         <---------LBD16          ---------->DOF2   <---------- ------>ANAC58     --------->ZAT2           --------->ALFIN1   --------->REM1(1)          ----------- --->ARR14(2)      --------->At4g35610   <---------TOE2(3) <---------At4g35610   --------->At4g35610 ----ARR14(2)      <---------ZAT2        <---------TOE1(3) --------->At4g35610   <---------At4g35610   acgacattggatctgcttctcagcttagtatctctaaaggaataaggtttggggatgaagcagctacttctcgctaaagactgagctaatgcattgtacg  11436500                                    <------NtERF2                                    <---------At4g35610                                    --------->ATERF1(1)                                    <---------LBD16                                   <---------RAP2.3(1)                                   <---------RRTF1(1)                                   <---------ORA47(2)                                   <---------ERF1                                   ------>NtERF2                                   <---------RAP2.6(1)                                   <---------ATERF1(1)                                  <---------RRTF1(2)                                  <---------ANAC46                                  <---------RRTF1(3)                                  <---------DREB2C(2)                                  <---------ANAC58                                  <---------ANAC58                                  --------->ATERF1(2)                                  <---------ATERF1(2)                                  <---------RAP2.3(3)                        --------->ANAC58                        --------->ANAC58 <---------WOX13(1)                  --------->HSFB2a(2)  <------NtERF2            --------->ANAC46      <---------DEAR3(1)       ------->GAMYB  ------>NtERF2   <---------HSFB2a(2)<---------ANAC46     --------->ANAC58 --->ANAC58 --------->ANAC58      <---------RAP2.6(2)   --------->MYB52(1) --->ANAC58<---------TOE1(3)      <---------RAP2.3(2)--------->ANAC46 --->ANAC46<---------TOE2(3)     --------->ATERF1(1) --------->ANAC58   --------->TOE2(3) ----GT1  <-----------GT1        <---------ABI4(1)   --------->ANAC58   --------->TOE1(3) -SPL7  <---------AHL20(2)     --------->ALFIN1     --------->DAG2     --------->ZAT6 -----AtSPL3--------->ZAT6 ---------->DOF2         ---------->DOF2   <-----------GT1    ------------>CBF ---->AtSPL8--------->ANAC58--------->DAG2----------->GT1 --------->ANAC58             *TSS   <------   ataccgccattttaacgctacgagaaacgaaaagtggcggcggattgaaaaaaaaaagcaacggaagagattaaccctaattgttctgaagtcaatgtga  11436600                                                                                                   <-                                                                                                  <--                                                                                                 ----                                                                                                -----                     ------>MYB46(1)                                                 ------------>CBF             ---------->DOF2                                                        --------->ANAC58          <-----------TBP              --------->ARR14(2)                           --------->ANAC58 <---------ZAT14     ------>MYB83      <---------ARR14(2)                 <------ZmHOX2a(1)     <---- ---YAB1<----------DOF2   ------------>CBF                         <---------YAB1 ---------->DOF2<---   tagtgaagggctttttaaagaccgactcagcaatgtgtgcaaatactaaaatgcccctatttatgtcttaatattaggaattacaaaagcaatccctatt  11436700                                                             --------->CCA1(2)                                                             <------ZmHOX2a(2)                                                            --------->AGP1                                                            <---------ARR11(3)                                                            <---------ARR14(2)                                                            --------->ARR11(3)                                                            --------->ARR14(2)  <---------ANAC58                                         --------->GLK1(1)  <---------ANAC58                                         <---------GLK1(1)  <---------ANAC46                                       <------ZmHOX2a(1) --------WOX13(1)          *TSS                        --------->LBD16 ----------CBF      --------->LBD16                   <-----------RAV1(2) ----->ATHB12       ------>NtERF2                     --------->HSFB2a(2) ---->AHL20(2)     --------->ANAC46   <-----------GT1 <---------LBD16                            ---- -----AHL20(2)    <---------LBD16   <-----------GT1   <---------HSFB2a(2)                 --------->LBD16 ------ICU4     --------->ARR14(2) ----------------------->TaNAC69(2)         --------->ARR11(3)<----   aattgcttgaaatttcaaattccgccataacttaagtttttctctattcttcgtctccaggagatccaaaaaccctagaagagctagctctccgagttat  11436800                                              --------->LBD16                                             --------->ANAC46                                             <---------DEAR3(1)                                         <---------At4g35610                                         --------->At4g35610                                       <---------WRKY38(1)                                     <-----------HVH21                                    --------->LBD16                                              <---                                <-----------GT1         <-----------GT1                          <---                  <------MYB46(1) <---------LBD16<----------DOF2                          ------->TEIL                  <------MYB83 <-----------GT1------>NtERF2    <-----------RAV1(2)--------->GLK1(2)    <-----------GT1        <---------RVE1(1)<---------LBD16   <------ZmHOX2a(2)<---------YAB1  <----- ----->YAB1      <---------MYB46(3)--------->LBD16<---------MYB52(1) ----------->GT1   <---------YAB1 -----YAB1     <---------MYB52(1)<---------LBD16<---------ANAC46   <--------P<-----------GT1  -------   cattttcaactattcgcgttgggttactgatattttcccggtcatctccggcgttaattttccgatcaggttagtaattttacgattctatgaatgtatg  11436900                                  <----------DOF2                            <---------GLK1(2)                         --------->HSFC1(1)                                --------->ZAT6 ------ANAC58            --------->HSFB2a(2)                    ----------->TGA1 ------ANAC58            <---------HSFB2a(2)              <---------ARR14(2)                     <--- ----YAB1               <---------LBD16           <---------ARR14(2)  --------->CCA1(2)        <----- >TEIL       <----------DOF2--------->ARR14(2)<-------TEIL--------->ARR14(2)           <----------DOF2   cttgtcttcgtttagctttctagttttctggaatcgcttttgagtagatgcaaatttgtggatttgatgacgatataagactaagcattcttttgttatt  11437000                                                                                ---------->DOF2                                                                         <------MYB46(1)                                                                         <------MYB83                                                                     <---------GLK1(2)                                                                     --------->ARR14(2)                            <---------WOX13(1)                       <---------ARR14(2)                          --------->ATHB12                         --------->LBD16                        <----------DOF2                           --------------->AGL15                       <---------ANAC58                           <---------------AGL15                       <---------ANAC58                          ----------------->AGL2                   --------->SPL7                                ----------------->AGL3           ---                <---------ANAC58                                 <-----------------AG        <------- --------GT1    <---------ANAC46                                 <-----------------AGL1 <---------ARR11(3) ----YAB1       <---------ANAC58                                 <-----------------AGL2<---------CCA1(2)   ctcgattcagtctcattttcgtagggcttgattgatgctaatttgagtttagcaactaattgttgattccagatttggttttgaaagctatatctataat  11437100  Previous    Next  AGI:  At1g31860.1    Description:  AT-IE (Arabidopsis thaliana bifunctional HisI-HisE protein). Identical to Histidine biosynthesis bifunctional protein hisIE, chloroplast precursor [Includes: Phosphoribosyl-AMP cyclohydrolase [Arabidopsis Thaliana] (GB:O82768); similar to unnamed protein product [Vitis vinifera] (GB:CAO49116.1); contains InterPro domain Phosphoribosyl-ATP pyrophosphohydrolase; (InterPro:IPR008179); contains InterPro domain Phosphoribosyl-AMP cyclohydrolase; (InterPro:IPR002496) Range:  from: 11434088    to: 11436587    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g31870.1    Description:  similar to hypothetical protein OsJ_025196 [Oryza sativa (japonica cultivar-group)] (GB:EAZ41713.1); similar to Os08g0178300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061128.1) Range:  from: 11436727    to: 11440089    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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