Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------ARR11(3)                                            --------->TGA2(2)                                           <-----------HVH21                                        -            <---------ZAT14               <---------bZIP60(1)                                       <            <-------TEIL      <---------At4g35610   <---------GLK1(2)                   <---------TOE1(3)      --------->ALFIN1      <---------LBD16<-----------TGA1                             <---------TOE2(3)     <------NtERF2     <---------GLK1(2)  --------->bZIP60(1)                         <---------ATHB12    --------->LBD16  <---------YAB1      <-----------STF1                        <-----------------AG   --------->ALFIN1  --------->ICU4     --------->MYB52(1)                    <---------ALFIN1   <---  <---------LBD16  --------->YAB1--------->At4g35610--------->ARR14(2)      <---------ALFIN1     ----   tagacgcggaggggttcacagtgatgattctccgcttctgcataacgtcatccagattttaaacggattagaactctcccacatcccaataaggttttcg  11420400             ------>ZmHOX2a(1)            --------->TOE2(3)                                       <---------YAB1       --------->MYB46(3)                                       <-------GAMYB ----------->GT1     ----------->RAV1(1)                --------->GLK1(2)      --------->MYB52(2)       <------ZmHOX2a(1) -------->At4g35610                    <---------ARR14(2)      <---------MYB46(3)   ---------->DOF2 ---------At4g35610         --------->ARR14(2)                <-------TEIL    --------->ANAC58 ------MYB52(1)  <---------AHL20(2)    <---------GLK1(2)  <---------TOE1(3)   --------->ANAC58   <--- ----->DOF5.7(2) --------->AHL20(2)    --------->ARR14(2) <---------TOE2(3) ---------->DOF2      <---   ttatctgcaacaatccttataaattactcaaatttgctacagattctgaattttgaatttagggttcgttgtaattgggaaagcaaaaaaggacagtttt  11420500                   --------->ARR11(3)                   <---------ARR14(2)            <---------At4g35610                                               ------>ZmHOX2a(2)          <-----------RAV1(2)                            --------->DAG2      <------ZmHOX2a(2)         --------------->AGL15                          ---------->DOF2      <---------GLK1(1)        <-----------------AGL1                      --------->ANAC58        <---------AGP1<------ZmHOX2a(2)    <----------DOF2--------->ARR14(2)               <----------ID1          --------->ARR11(3)    <---------DAG2 <---------ARR11(3)               --------->ANAC58        <---------ARR11(3) <-----------GT1  <---------GLK1(1)               --------->MYB52(1)    ---------->DOF2  <---------ARR11(3) ------YAB1 --------->At4g35610               ---------->DOF2 --------->At4g35610  --------->AGP1 ------AHL20(2)   <---------CCA1(2)       ------------------------>ANAC81  --------->RVE1(1)     ----   ttattacttttctcagatgggtatcttcaatatgcattaacaaaatccaaaagaacgaaaaaggagcttagactaaaagatctcagaactagatcactca  11420600                                                                                                   <-                                                                                                  <--                                                                                            ------>ZmHOX2a(2)                                                                                           --------->GLK1(1)                                                                                           <---------GLK1(1)                                                                                           <------ZmHOX2a(2)                                                                                          <---------ARR14(3)                                                                                          --------->ARR11(3)                                                                                          <---------ARR11(3)                                                                                          --------->ARR14(3)                                                                                          --------->ARR14(2)                                                                                    -----------------                                                                                    <---------ANAC58                                                                                    <---------ANAC46                                   <----------DOF2                    --------->GLK1(2)   <---------ARR14(2)             <---------DOF5.7(2)  <---------ICU4              <-----------HVH21     <---------ANAC58<            <---------ZAT18     --------->ARR11(3)      --------->ANAC58       <---------ANAC46  <---    --------->ICU4     ---------->DOF2      ----------->GT1------->TEIL        <---------ANAC58 <---- ------>DOF2--------->ZAT18     <---------ARR11(3)      --------->ANAC58       <---------ANAC58 -----   aaagtcaaaattagtgaacgatgacaaaagaataaatctttacgagaggtgaagaagcacgaaccgtgagagaatcgagggtcgtgtcttgagatctccg  11420700    <---------MYB52(1)   <-------GAMYB                             --------->ARR11(3)  <---------MYB46(3)                     --------->LBD16  --------->MYB52(2)                  <------ZmHOX2a(2) <---------TOE1(2)            --------->HSFB2a(2)--------------->AGL15 --------SPL7                 <---------HSFB2a(2)<---------------AGL15 -------MYB46(3)      ---------->DOF2<---------ARR14(2) ---->WRI1          <---------YAB1 <---------HSFC1(2) ---------MYB52(1)<---------ICU4   --------->HSFB2a(1) ------MYB52(1)   --------->YAB1   --------->HSFC1(2)                      <---------DAG2 -------HVH21    --------->ICU4    <---------HSFB2a(1) >>>>>>>>>TBF1       <----------DOF2 ---->LBD16  <---------YAB1<----------DOF2   <---------ARR11(3)     ---------->DOF2             -----   tcgttcgttaagttgatgaataatgaaagcttttggaacgatccagagatacttgaagaagaaaacaaaacaaagccctttttgtcgaataaacccagat  11420800                                                        <-----------HVH21                         --------->AHL20(1)          --------->TGA1a                         <---------AHL20(1)          <---------TGA1a                         --------->ARR11(3)          ===========================bZIP_DOF                      <-----------TBP                <---------O2                          <---------LBD16                      --------->AHL20(2)             --------->O2                  <---------ANAC58                  <--------HAHB4                     ===========================bZIP_DOF   --------->HSFB2a(2)                  *TSS<---------AHL20(2)  <---------ARR11(3)                       <---------ANAC58                  -------->ATHB1          --------->ARR11(3)                     --------->GLK1(2)                  --------->ATHB51        <---------AHL20(1)                    <---------GLK1(2)                  <---------AHL20(2)      --------->AHL20(1)                    --------->ARR11(3)                  --------->AHL20(2)     --------->CCA1(2)                      <---------ARR11(3)                 <---------ATHB51       <---------ARR11(3)           <----------DOF2       <---------HSFB2a(2)                 --------->ICU4         --------->ARR11(3)          <---------ANAC58    <----------DOF2            --------->YAB1 <------------CBF<---------AHL20(2)       <---------ANAC46   <---------ANAC58 ---->GLK1(1) <---------YAB1 ----------->GT1        <------NtERF2   <---------ANAC58   <---------ANAC58   ttcaaaagaatgaattacaattatttatatattggaaaaacagatatatttggcctcgtgtcatcgagtggctttttaaaaagattcttgcttctcggaa  11420900                                                  --------->ARR14(2)                                             ------>ZmHOX2a(2)                                           --------->ARR14(2)                                           <---------ARR11(3)         --------->ZAT6                                     --------->GLK1(2)    <---------ARR14(2)                                     <---------ARR14(2)<---------ANAC58                       <------ZmHOX2a(2)   <---------ARR14(2)   <----------DOF2                 -----                      --------->ARR11(3)   <---------AGP1 --------->ARR14(2)       <---------YAB1              --------->ALFIN1       --------->ARR14(2)<---------ANAC46         <---------ARR11(3)        ------------>CBF            <---------GLK1(2)  <---------ANAC58         --------->ARR11(3)       <-----------GT1<---------ARR11(3)  <---------CCA1(2)     <---------DAG2  --------->GLK1(2)   gaaatgtttttacaatgtgtgagagatcatggaagatggaatctggatctcaaatttgcgtatgtgctttttatactacaaaaatctaattgagagtctt  11421000                                   --------->ARR11(3)                   <---------ARR14(2)                                   <---------ARR11(3)                   --------->ARR14(2)                               ---------->DOF2                         ------>MYB83                           <------ZmHOX2a(1)                           ------>MYB46(1)    --------->ZAT14      <---------TOE2(3)       <----------DOF2  <-----------GT1    <---------ZAT14--------->AHL20(2)  <---------ZAT14    --------->HSFB2a(2) ---->ICU4      <---------------AGL15  --------->ZAT14    <---------HSFB2a(2)   --------->ATHB12>>>>>   aattagtttactaaattgctataaattgaggaagaaagctcttcactaatgcttttttttttagaaaataaccaaatacacatgatttagaaacttcaaa  11421100                                                                   --------->CCA1(2)                                                                  --------->ARR14(2)                                                                  <---------ARR14(2)                                                                  <---------ARR11(3)                                                                  --------->ARR11(1)                    --------->CCA1(2)                             --------->ARR11(3)                x                   <---------AHL20(2)                  --------->ANAC46                            xx                   --------->AHL20(1)                <-----------GT1                              <--                --------->AHL20(2)       <---------AHL20(2)   ---------->DOF2               xxxxxxxxx            <-------TEIL                xxxxxxxxxxxxxxxx>smallRNA(i)                       xxxxxxxxxx        <---------------AtSPL8         <---------CCA1(1)    --------->MYB46(3)         xxxxxxxxxxxxxx        --------------->AtSPL8         <---------RVE1(1)  ------>MYB46(1)          --------->ZAT6 xxx    --------->YAB1 <---------AHL20(1) <---------ARR11(3)  ------>MYB83   <---------GLK1(1)xxxxxxxxxxx >>>>>MYB80 ------->TEIL              --------->ARR11(3)  ----------->RAV1(1)      <xxxxxxxxxxxxxxxxx   ccaaaatgaaaatgtacataatatatgaaatatagtatgagattttttttttttttaacccaacaaaagatatggaattcatataccactattaaacttt  11421200                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                     <---------ARR14(2)                     --------->ARR14(2)                  <---------ANAC58                  <---------ANAC46                  <---------ANAC55(2)                  <---------ANAC58        <<<<<<<<<GATA-3                 <---------LBD16          <<<<<<<<<GATA-4                <xxxxxxxxxxxxxxxxsmallRNA(s)               <xxxxxxxxxxxxxxxxsmallRNA(i)                             ------>NtERF2               <xxxxxxxxxxxxxxxxsmallRNA(s)                           <---------ANAC58             xxxxxxxxxxxxxxxxxxx>smallRNA(le3)                        <xxxxxxxxxxxxxxxxsmallRNA(i)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         <---------ANAC58    xxxxxxxxxxxxxxxx>smallRNA(i)          <<<<<<<<<GATA-2     --------->ANAC58 <---------MYB46(3)--------->LBD16      --------->WOX13(1)--------->ATHB12 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <------ZmHOX2a(2)  <---------YAB1--------->LBD16 xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -------AtLEC2xxxxxxxxxxxxxxxx>smallRNA(s)<<<<<<<<<GATA-1--------->ICU4<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxx>smallRNA(si3) <---------TOE2(3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxx>smallRNA(le3)   <---------TOE1(3) --------->ANAC55(1)<xxxxxxxxxxxxxxxxxxxsmallRNA(l2) xxxxxxxxx>smallRNA(le3)     ---------->DOF2  <---------ALFIN1--------->ANAC58  <---------ANAC55(2) < xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->MYB59   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <---- xxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxsmallRNA(s)--------->YAB1<---------LBD16            ----- xsmallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(i)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->ATHB12   gaatggttacctagtgtattgcggatcggattaaagttagatcaatccacacttaattcatgattcgcaattgcggaccaatatgtaagattggggattt  11421300  Previous    Next  AGI:  At1g31830.1    Description:  amino acid permease family protein. similar to amino acid permease family protein [Arabidopsis thaliana] (TAIR:AT1G31820.1); similar to amino acid permease family protein [Arabidopsis thaliana] (TAIR:AT5G05630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66709.1); similar to hypothetical protein OsI_011979 [Oryza sativa (indica cultivar-group)] (GB:EAY90746.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47427.1); contains InterPro domain Amino acid permease-associated region; (InterPro:IPR004841); contains InterPro domain Amino acid/polyamine transporter I; (InterPro:IPR002293) Range:  from: 11418606    to: 11420818    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version